Trichogramma pretiosum: 106648520
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Entry
106648520 CDS
T07644
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106648520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpre03400
]
106648520
DNA repair and recombination proteins [BR:
tpre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106648520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
106648520
NCBI-ProteinID:
XP_014220943
LinkDB
All DBs
Position
Unknown
AA seq
1230 aa
AA seq
DB search
MPRKASTSVMKDEIPSRGKRITRASSKPLSETSKTKEEINEVIKKPRIVAKNGIKNKTRE
LKTDIDKTSKEQVKKTAKGSNKKTKTDTLERANCPGKSKTNKTKGKENIINQNKKRTRQD
SEGDKSEDYENAEKVEPAKSNPIKKRRLIIPDFECSDGSEDEYKPDSDLSDEESDDNFAV
ESESSLEEMSESDFSDNNESEEDNLPTKKVSKNKTSNAKSSSHKPKKACATKSLRSKTAK
VTTAKSKDLPIPETVVEKSASSITWPHLTWEFLQTDHIMDKNKRRPDHPEYDPKTLYVPE
EFFNKQTATMRQWWSLKSEHLDTLLCFKWGKFYELYHMDAVTAVNAVGLAIHKKDIAQAG
FPEKAYCRFAGGLIEQGYKVARIEQTETSEAMNARVANEMKILNTKKVDKVVRREICQIS
TKGTRVFTQLDEPTRNPAASFLLSLYEKKDQRNSTIQYGVCFVDASIGHFYLGQFQDDQC
NSRLLTLLAHSPPAQIVFERGNLSSATLKILEHLAPNVLKEGLLKENQFWTPPMVLKCLQ
EEEYFKNDEDSSFSWPDGLKSFIIEDNSEKAVVSEGKELALNALGGCVYLLRRYKLDYQV
LSQRNFHSYIPPDFTCDSKSTETRFAQNMVLDAMTINNLRILGNDGSLIDTLDTCCTPFG
KRLLKEWICKPSCQKLVIKKRQNAIGQLLDNLDVIKTARSMLSELSDLERLLSKIHVQGN
AAIKKNHPDGRAILCETQHYTKKAIKEFIEVLSEFEKILLITDLFTKFNDRLIQECTHFQ
PAGDFPDYRELLKHFKDSFDHDEALESGIIIPKKGVDKDYDATVKIFDQIDKEVDDYVEA
QKIYFKGSVKLVGSEGKRYQIEIAESLFKEADTERYKVMDAKKGKIRFYTTEAEELLERK
IQAEELQDVALRDINRRIFGKFSKHYHEWSKAVHNIAVLDCLISLAEYARSNDTCIPEIY
DDTDNKGSLIEIRDGRHPCISLDNYISNDTLMSTDGVASLIILTGPNMGGKSTLMRQVGL
ITVMAQIGCYVPAAECKLTLVDRIFTRLGANDDIMSGQSTFLVELKETAVILKHATKYSL
VLLDELGRGTSTYDGTAIAASVVEALTKTNCRTLFSTHYHSLVEDYRANNNVSLAHMACI
VENENEDQACELNVTFLYKLTEGSSPKSYGFNAARLAGVPANIINRAHKLASKLEAEVNL
RHAFTALCKLSDKTAFKPLIHKGIQILSKC
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaaagcttctacttctgtcatgaaagatgaaattccatcgcgaggtaaaaga
atcaccagagcatcttcgaaacctctctccgaaacttctaaaacgaaggaagaaataaat
gaagtgattaaaaaacctcgaattgttgcaaaaaatggaataaaaaataaaacaagagaa
ttaaaaacagacattgataaaacttccaaagaacaagtcaaaaaaacagccaaaggatca
aataaaaagacaaaaactgatactttggaaagagctaattgcccgggtaaaagtaaaact
aataaaactaaagggaaagaaaatatcattaatcaaaataaaaaaagaactcgtcaagat
tctgaaggagataagagtgaagactatgaaaatgcagaaaaagtggagcctgcaaaatcc
aaccctattaaaaagagaagattaattattccagattttgaatgcagcgatggatccgag
gatgaatataaacctgattcagatctctcagatgaagaatcagatgacaattttgcagtg
gaatctgagagctcacttgaagaaatgtcagagagcgatttcagtgacaacaatgaatcg
gaagaagataatttacccacaaaaaaagtatcaaagaacaaaacatctaatgccaaatca
agttctcataaacccaaaaaagcatgtgcaactaaatctctaaggagcaaaacagcaaaa
gtcacaactgcaaaatctaaagatttacctattccagaaactgtggtagaaaaatctgcc
agctcaataacctggcctcatttgacttgggagtttttacaaactgatcatataatggac
aaaaataaacgaagaccagatcatcctgaatatgatccaaaaactttatatgtcccagag
gaatttttcaacaaacaaactgctacaatgcgtcagtggtggtctcttaaatctgaacat
ctggacactctgttatgtttcaaatggggcaagttttatgaattgtatcatatggatgca
gttactgctgtaaatgctgttggcttagcaatacataagaaagacatagctcaagcagga
tttcctgaaaaagcttactgtcgttttgctggtggtcttattgaacaaggatataaagtt
gcaagaattgaacaaacagaaacttcagaagctatgaatgcaagggtagcaaatgaaatg
aaaattttgaatacaaagaaagttgataaagttgtaagacgagaaatatgtcaaatcagt
acaaaaggaactagagtttttactcagttagatgaaccaactagaaatccagcagcttct
tttcttttatcattatatgagaaaaaagatcaaagaaattcaactatacaatatggtgtt
tgttttgttgatgcttctattggacacttttatctaggtcaatttcaagatgatcagtgt
aactctagattactaacattgcttgctcacagtccaccagctcaaattgtttttgaacgt
gggaatttatcatcggccactcttaaaatattggaacatttagcaccaaatgttttaaaa
gaaggtttattgaaagaaaatcagttttggactcctccaatggttttgaagtgtcttcaa
gaggaagaatatttcaaaaatgatgaagattcaagtttttcatggccagatggtctaaaa
tcttttattattgaagataattctgaaaaggctgtggttagtgaaggtaaagaattggct
ttgaatgctctaggaggctgcgtatatttacttcgtcgttataaattagattatcaagta
ttgtcacagcgaaattttcattcttacattcctccagattttacctgtgattctaaatca
acagaaactagatttgctcaaaatatggtattggatgccatgactataaataatttgagg
attctgggcaatgatggatcattaatagacaccttagatacttgttgtactccatttgga
aaaagattattgaaagaatggatttgtaagccctcctgtcaaaaattagtgattaaaaaa
cgacaaaatgccattggacaattactggataatttggacgttattaaaaccgctcgtagc
atgttaagtgaattatctgatcttgagcgtcttttgagcaagattcacgttcaaggaaat
gcagctataaaaaaaaatcatccagatggacgagctatactttgtgaaactcaacattat
accaaaaaagctataaaggaatttattgaagttctctctgaatttgaaaaaattctgctt
ataactgatttgtttactaagttcaatgatcgcttgattcaagaatgtactcatttccag
ccggctggtgattttcctgattacagggaacttttaaagcatttcaaagattcttttgat
cacgatgaagctcttgaaagtggcataataattccaaaaaaaggagttgataaagattac
gatgctactgtaaaaatatttgatcaaattgacaaagaagtagatgattacgtagaggca
caaaaaatttactttaaaggttcagtaaaacttgttggatctgagggtaaaagatatcaa
attgaaatagctgaaagtctattcaaggaagctgatactgaaagatataaagtcatggat
gctaaaaaaggaaaaattcgattttacacaacagaagcagaggaactgctggaaagaaaa
atacaagctgaagaattacaagatgtggcactcagagatatcaatagaagaatatttgga
aaatttagcaaacattatcatgaatggagcaaagcagttcataacatagcagtactagat
tgtttaatttctttggcagaatatgctcgatctaatgatacctgtattccagagatatat
gacgatacagataataaaggatctctcattgaaattagggatggaaggcatccttgcatt
agtcttgacaactatatttcaaatgatactctaatgtcaactgatggagttgcttcttta
ataattttaactgggcccaatatgggtggtaaatctactttaatgcgccaagttggtcta
ataacagtgatggctcaaattggttgttatgtgccagcagcagaatgtaaattaacttta
gtagataggatatttactcgtcttggagctaatgatgatataatgtcaggacaaagtaca
ttcttagtcgagttgaaagaaactgctgttattctaaaacatgccacgaagtactcatta
gttttattagatgaattgggtcgtggtacatccacttatgatggaacggcaattgctgca
tcagttgtagaggctctaactaaaacaaattgcagaactcttttttccactcattatcac
tctctcgtagaagattatagagcaaacaataatgtttctcttgctcatatggcttgcatt
gtagaaaatgaaaacgaagatcaagcttgtgaattaaatgttacgttcctttataaatta
acagaaggtagtagtccaaaatcgtatggttttaatgctgctcgattagctggagtacct
gcgaatattatcaaccgagctcataagcttgcatcaaagttggaagctgaagtaaatctt
cggcatgcatttacagcactgtgtaaattgtctgataaaactgcatttaaacctttaatt
cataagggtattcaaattttgtccaaatgctga
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