Trichogramma pretiosum: 106648582
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Entry
106648582 CDS
T07644
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03020
RNA polymerase
tpre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106648582
09124 Replication and repair
03420 Nucleotide excision repair
106648582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpre03021
]
106648582
03400 DNA repair and recombination proteins [BR:
tpre03400
]
106648582
Enzymes [BR:
tpre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106648582
Transcription machinery [BR:
tpre03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106648582
DNA repair and recombination proteins [BR:
tpre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106648582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
DUF3137
Motif
Other DBs
NCBI-GeneID:
106648582
NCBI-ProteinID:
XP_014221062
LinkDB
All DBs
Position
Unknown
AA seq
1920 aa
AA seq
DB search
MSTSDSKAPLRTVKRVQFGILSPDEIRRMSVVENGIAFPETMEGGRPKQRGLMDPRQGVV
DRNSRCQTCAGNMTECPGHFGHIDLAKPVYHIGFITKTMKILRCVCFYCSKLLVSPQNPK
IKEIIMKSKGQPRKRLAFVYDLCKSKKICEGGDEMDMSKEGQAPDPNKKPSHGGCGRYQP
NLRRSGLDISAEWKEVNEDSQEKKMMLTPERAWEILKAITDEESFILGMDPKYARPDWMI
ITVLPVPPLAVRPAVVMYGSAKNQDDLTHKLADIIKANNELSKNETSGAAAHILIENLKM
LQFHVATLVDNDMPGMPRAMQKSGKPLKSIKARLKGKEGRIRGNLMGKRVDFSARTVITP
DPNLRIDQVGVPRSIAQNLTFPEIVTPFNETYMKSLVQRGHNRYPGAKYIIRNNGDRIDL
RFHPNPSDLHLEYGYKVERHIKDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCT
SPYNADFDGDEMNLHVPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLTAVRKMT
KRDVFIEKEQMMNLLMFLPNWDCKIPKPCILKPKPLWSGKQLFSLIIPGNVNMIRTHSTH
PDDEDDGPYKWISPGDTKVMVEHGELIMGILCKKSLGASAGSLLHICMLELGHEVCGRFY
GNIQTVINQWLLYEGHSIGIGDTIADPKTYSEIQNAIKKAKEDVIEVIQKAHNMELEPTP
GNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVAGSKGSNINISQVIACVG
QQNVEGKRIPFGFRKRTLPHFIKDDYGPESKGFVENSYLAGLTPSEFYFHAMGGREGLID
TAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLPTI
KLSNKAFEKKFKFDPSNERYLRRIFSEDIVREMMGSGEVVSELEREWEQLSRDRAALREI
FPSGESKVVLPCNLQRMIWNVQKIFRINKRAPTDLSPIKVINGVKELLDKCVIVAGEDRL
SKQANENATLLFQCLVRSTLCTKVVSEEFRLSSEAFEWLIGEIETRFQQAQVVPGEMVGA
LAAQSLGEPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKKPKAPSLTVFLTGSAAR
DAEKAKNVLCRLEHTTLKKVTANTAIYYDPEPQSTVIAEDQEFVNVYYEMPDFDPTKISP
WLLRIELDRKRMTDKKLTMEQIAEKINAGFGEDLMCIFNDDNAEKLVLRIRIMNGEDTKF
SDNTDTEEAADKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDAKKRITITESG
EFKAIAEWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFQVLGIEAVRKSVEKEMNAVL
QFYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAASHA
EVDPMRGVSENIIMGQLPRIGTGCFDLLLDAEKCKQGIEIPTNKEANIMGGTGILFGAAT
PSQSPSGLKTPWMGTPGYAMSPGLGSGMTPGGACFSPAAGSDASGLSPAYSAFSPGQPGS
PGSPGPNMSPYMSPAGTSPRYSPMSPSGYSYPASPSRTPSSDHYSTASPNYSPSSPKYVP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPASPSYSPSSPNYSPTSPSYSPTSPSF
AGGTPPRYTPTSPTYSPTSPSYSPTSPSYSPSSPQHSAISTNYSPSSPNYSPTSPTYSPS
STRYSPTSPTYSPPSFNYSPTSPSYSPTSPAYSPQVPGYSPTSPTYSENSPADENDEGAT
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgtctacatcagattcgaaagctccgttgaggacggtcaaacgagtccagtttggcatt
ctttctccagatgaaatccgacgcatgtctgttgtcgaaaatggcattgcctttccggaa
acgatggagggtggaagaccaaaacaaagaggtctcatggacccacgacaaggtgtcgtt
gacagaaattctcgctgtcagacttgtgccggcaacatgactgaatgtcctggccacttt
ggtcatattgatttagcaaaacctgtatatcatattggatttattacaaaaaccatgaag
attttaagatgtgtttgcttttactgttccaaactgctggtcagtccgcaaaatcctaaa
atcaaagaaattatcatgaaatccaagggtcagccacgaaaacgtttagcgtttgtatac
gatttgtgtaagagcaaaaaaatttgtgaaggaggtgatgaaatggatatgtctaaagaa
ggacaagcacccgatccaaataaaaaaccaagtcatggtggatgtgggcgatatcaacca
aatcttcgaagatctggtttggatatttctgctgaatggaaagaagttaatgaagattca
caggagaaaaaaatgatgttgactccagaaagagcttgggaaattctcaaagctattact
gatgaagaatcatttattttgggtatggatcccaagtatgccaggccagattggatgata
ataacagtgttaccagtaccacctcttgctgtccgaccagctgttgttatgtacggttca
gctaaaaatcaagatgatttaacccacaaacttgctgatataattaaagcaaacaatgag
ctatcgaaaaatgaaacaagtggagctgctgcacacatactgatagaaaatttaaaaatg
cttcaattccatgtagctacgcttgttgataatgacatgccaggaatgcctagggctatg
caaaaatctggaaaaccgctaaaatctatcaaggccagattgaagggtaaagaaggtcgc
attagaggtaaccttatgggtaaacgtgtagatttttctgcacgtacagttatcacacct
gatccaaatttgagaatcgatcaagttggtgtaccacgaagtatcgcacaaaacttgact
ttcccagaaattgtcactccttttaatgagacatacatgaaatctctcgtgcaaagagga
cataatcgttatcctggtgccaagtacattataagaaacaatggagatcgtattgattta
cgctttcatcccaacccatcagatttacatttagagtatggatacaaagtagaaaggcac
ataaaagatggtgatttagtaatatttaatcggcaacctactcttcacaaaatgagtatg
atgggtcacagagtcaaagtcttgccatggagtacattccggatgaatttaagttgtacg
tcaccttacaatgcagattttgatggagatgaaatgaatttgcatgtaccacaatcaatg
gaaaccagagctgaagtagaaaatattcatgtgactcccagacaaattataactccacaa
gcaaacaaaccagttatgggaattgtgcaagatacattaacagctgtcagaaaaatgact
aagagggatgtttttattgaaaaagagcaaatgatgaacttgcttatgtttttgccaaat
tgggattgtaaaattcctaaaccttgcattttaaaaccaaaacctctttggtctggaaag
caattgttctcattaattattcctggtaatgtcaacatgattagaacacacagtacacat
ccagatgatgaagatgatggtccctacaaatggatttcacctggagataccaaagttatg
gttgaacatggagaacttatcatgggcatattatgtaaaaaatctcttggtgcctcagca
ggttctttgttgcatatttgcatgcttgagttgggtcatgaggtttgtggcagattttat
ggcaatatacagacagtcataaatcagtggttgttatacgagggtcattcaattggtatt
ggagacacaattgctgatcctaaaacttattcagaaattcaaaatgctatcaagaaagct
aaagaggatgtcatagaagtcattcagaaagctcacaatatggaacttgagcccacaccc
ggtaatactctgcgtcagacttttgaaaatcaagtaaacagaattctcaatgatgctcgt
gacaaaactggtggatccgctaaaaagtctttgactgaatataataacttgaaagctatg
gtcgttgcaggttctaagggatcaaatattaatatttcacaagttattgcttgtgtcgga
caacagaacgttgaaggtaaacgtataccatttggtttccgcaaacgcacattgcctcac
ttcatcaaggatgattacggtcctgaatctaaaggatttgtagaaaattcatatcttgct
ggtcttacaccatcagaattttatttccacgctatgggaggtcgtgaaggtcttatcgat
actgctgtaaaaaccgctgaaaccggttacattcagcgtcgtcttataaaggctatggag
tctgtgatggttcactatgacggtacagtcagaaactcggtcggtcagctcattcagttg
cgatatggtgaggatggactgtgcggagaaactgtggaatttcaaaatttacctactata
aagctaagtaataaagcttttgagaaaaaattcaagtttgatcctagcaatgaaaggtac
ctgcgacgtatattcagtgaggatattgttagagaaatgatgggttctggagaagtcgtt
tcagaattagagcgagaatgggaacaactttccagagatagagcagctcttagagaaatt
ttcccaagtggggagtcaaaggttgtacttccttgtaatttacagcgaatgatatggaac
gtgcagaaaatcttccgtatcaataaacgagctccaactgacttgagcccgataaaagta
atcaatggagttaaagaacttctggataaatgcgttattgtagctggagaagatcgtctt
agcaagcaggctaatgaaaatgcaactttacttttccaatgtttggttcgctcgaccttg
tgcaccaaagtagtttctgaagaattcagattatcaagtgaagcttttgagtggttaata
ggagaaattgaaactagattccagcaagcacaagtagtaccaggtgaaatggttggggct
ttggctgcgcaatcacttggtgaaccagctactcagatgacgttgaacacgttccatttt
gccggtgtatcggctaaaaacgtaaccctgggtgtaccacgtttgaaagaaatcatcaac
gttagtaaaaaaccaaaggctccatctctaaccgttttcctcacaggatcagcagctaga
gatgccgaaaaagccaagaatgtcttgtgcaggcttgagcatactactttaaagaaggtt
accgctaatacagcaatttattatgatccggaaccacagagcactgtgattgcagaagat
caagaattcgttaatgtctactacgaaatgccggactttgatccaactaaaatttcaccg
tggctgttacgtattgaactcgatcgtaagagaatgacagataaaaagttgaccatggaa
caaatcgccgagaaaattaatgctggttttggtgaagatttgatgtgcatattcaacgac
gacaacgccgaaaaacttgtactccgcatccgtataatgaatggtgaagataccaagttt
tctgacaacaccgatactgaagaagctgctgataaaatggaggacgatatgtttttgcgg
tgtatcgaagcaaacatgctcagtgacatgacgctacagggtatcgaggcaatcggcaaa
gtgtacatgcacttgccacagacagatgctaaaaaaagaatcacaatcacagaaagcggc
gaattcaaagcaattgcagagtggctactcgaaacagacggtacaagtttaatgaaggta
ctgagcgaacgagacgttgatccagtacgtacattctctaatgacatctgcgagatattc
caagttctgggtatcgaggccgtacgaaaatccgtagagaaagaaatgaacgctgtattg
cagttctatggattatacgtgaactatcgccacttggctttactttgtgatgtcatgacg
gccaaaggtcatcttatggccatcacacgtcacggtattaacaggcaagatactggagct
ctgatgagatgctcattcgaagaaacagtagatgtgttgatggatgcagcttcacatgct
gaagtagatccgatgagaggagtttcagaaaacatcattatgggtcagctgcctcgtatt
ggtactggttgctttgatcttctactcgacgcagaaaaatgtaagcaaggtattgagatt
ccaacgaacaaagaagccaacatcatgggtggcactggaatattatttggagcagcaacc
ccgagtcaaagtccatcgggtctcaagacaccttggatgggaactcctggctatgccatg
tctcctggcctcggcagtggcatgactcctggaggtgcctgcttctcaccagcagctgga
tcagatgcatcaggcttatcgccggcttattctgccttctcacctggccagccaggaagc
ccgggcagtccaggaccaaatatgagcccttacatgtcgccagcaggaacatctccaaga
tattcgccaatgagtccgtccgggtactcgtaccctgcatctcctagtagaactccatcg
agcgatcattactcgacggcgtctccaaattattcaccatccagcccgaaatacgtgccg
acgagtccaagctattctccaacttcaccgagctactcgcctactagtccaagctattca
cctacatcgccaagttattcaccagcgagtcccagctattcgccaactagtccaagctac
tcgcctacatcgcctagttattcgccgacgagtccgagctactcgcccacgtcaccgagt
tattcaccgactagcccgagctactcgcctacatcaccgagttactcacctacgagtcca
agctactcgccaacttcaccgatttactcgccgacgtcaccaagctactcaccaaccagt
ccgagctactcgccgacgagtcccagctattcaccaactagtcccagctattcaccaacg
agtccgagctattcaccaacgagtccgagctactcgcctacgtctccgagctactcaccg
acgagcccgagctactcaccaacgtcacccaattatacaccggcttctccatcgtactcg
ccctcgtctccaaattactcaccgacgtcgccgagctactcgccaacttcaccatcgttt
gctggtggaactcctcctcgttacacaccaacctcaccgacttattcaccaacaagtccc
tcatactcaccaacttcacccagttactcaccaagttcgcctcaacacagtgctattagc
acaaattactctccaagtagtccaaactattcaccgacctcgcctacttattcaccatca
agcacaagatactctccaacttctcctacgtattctcctccgagcttcaattattcacca
acgtcgccgagttactctccaacatcgccagcgtactcaccacaagtgccaggctactcg
cctaccagtccaacttattccgagaattctcctgccgatgaaaacgacgaaggtgcgacg
taa
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integrated database retrieval system
