Trichogramma pretiosum: 106648592
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Entry
106648592 CDS
T07644
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
tpre
Trichogramma pretiosum
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpre03041
]
106648592
03016 Transfer RNA biogenesis [BR:
tpre03016
]
106648592
Enzymes [BR:
tpre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106648592
Spliceosome [BR:
tpre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106648592
Transfer RNA biogenesis [BR:
tpre03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
106648592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Cas_Csy4
Motif
Other DBs
NCBI-GeneID:
106648592
NCBI-ProteinID:
XP_014221079
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MAAFEEMGVLPEISKALEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFSIPV
LQIVWETAKDLLSGKTRKSTSSSQSPIWSLSVHDRSNALSITSDGLRCQSREQREWHGCR
ATKGVKGPGLYYYETIINDEGLCRVGWSNSQAAVDLGTDKFGWGFGGTGKKSNSKQFDNY
GEPFGKSDVIGCLLDLNQGEIRFWKNGIDLGTAFKLNHQQKSEAFFPAVVVKNAEIAFNF
GAQPFKHPPKNGYVAVSAAPANQIISNPNSANTQIRTSDKSVNNKGPKAIIIEPSRELAE
QTCSQIEKCNKYIQDPPVSVLLVVGGISIKDQINQLGRGVDIVVGTPGRLEALVQDGYVS
LDQCRFYVLDEADGLLKQNYGPMIERLHKAMPKMSSEGNRLQMIVCSATLHAFEVKKMAE
KLMHFPTWVDLKGEDAVPETVHHVVVMIDPQKDDSWQRMRRHIQTDGVHLQDSHRAIQTA
EAKSEAVKILKGEYCLRAIREHKMDRAIIFCRTKMDCDNLKRFLDGIQDRELSSVCFHGD
RKPDERRNNLNKFKREEVRFLICTDVAARGLDISGLPFIINMTLPDEKTNYVHRIGRVGR
AERMGLAISLVSSVPEKVWYHGEWCSSRGRNCSNTNLTEQGGCCIWYNEPRLLAEIEDHL
NITIQIVDKDLKIPMNEFDGKVVYGEKQLNRGSNYDYHVQEMTPSVVHLQRLEAEAQVTY
LKRFHLVA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgttcgaagaaatgggtgtgctgccggaaatttctaaagcccttgaagaaatg
gattggactcttccaaccgatgtccaagctgaagctataccattaattcttggaggtggt
gatgttttgatggctgctgaaactggcagtggtaaaacaggagctttttcaatacctgtt
ttgcaaattgtctgggaaactgcaaaagacttattatctggaaaaacaagaaaatcaact
tcttcttctcaatcaccaatttggagtttaagtgttcatgatagaagcaatgcactatct
ataacttctgatggtcttagatgtcaaagtagagaacaaagggaatggcatggttgtcga
gccaccaaaggtgtcaaaggtcctggattatattattatgaaaccatcattaatgatgaa
ggtttatgtagagtgggatggtcaaattctcaggccgctgtagatctaggaactgataaa
tttggatggggctttggtggaacaggaaaaaaatctaactctaagcaatttgacaattat
ggtgaaccttttggtaaaagtgatgttattggttgcttgttggatttgaaccaaggagaa
attcgattttggaagaacggaattgatttaggaacagcttttaaattgaatcatcagcaa
aagtctgaagctttttttccagctgttgtggtgaaaaatgcagaaatagcatttaatttt
ggagcacaaccttttaaacatcctcctaaaaatggctatgtagctgtatctgccgcccca
gccaatcagattatttcaaatccaaattctgctaacacacaaattcgtacttctgacaaa
tcagtaaataacaagggcccaaaagctatcattatcgagccatctcgtgagcttgcagaa
caaacttgcagccaaattgaaaaatgtaataagtatattcaagatcctcctgtatcagta
ttattagttgttggaggaataagtattaaagatcaaataaatcagttgggacgtggtgtt
gatatagtagttggaactccaggtcgtttagaagcattagtacaagatggatacgtatct
ctggatcagtgcagattttacgtcctggatgaggcagatggtctattaaagcaaaattat
ggacctatgattgaaaggttacataaggcaatgccaaaaatgtcaagtgaaggaaataga
ctacaaatgattgtttgttctgccacattgcatgcttttgaagtcaaaaaaatggctgaa
aaactcatgcacttccctacatgggtcgacttgaaaggagaagatgcagttccagagacg
gtacatcatgtagttgtaatgatagatcctcaaaaagatgattcttggcagcgtatgaga
agacacattcagaccgatggtgttcatttacaagatagtcatagagccattcaaacagca
gaggccaagtctgaagctgttaagatactcaaaggagaatactgtctcagagctattaga
gaacataaaatggatagagcaattattttctgccgtactaaaatggactgtgacaatttg
aaacgatttttagatggcattcaggatagagaattgtctagtgtttgtttccatggcgat
cgtaagcccgatgaacgaagaaataatctcaataaatttaaacgtgaagaagttcgattt
ttaatttgcaccgatgtagcagctagaggactcgatatttcgggcttaccttttattatc
aacatgaccctgcccgacgaaaaaacgaactatgtccaccgcatcggtcgagttggtcga
gcagagagaatgggtttagccatatcattagtatccagcgtacctgagaaagtttggtat
cacggtgaatggtgttcaagtaggggtcgtaattgttcaaataccaaccttactgagcaa
ggtggttgctgcatttggtacaacgaaccgaggcttttagccgaaattgaagatcactta
aatataacaatacaaattgtcgataaagacttgaaaatacccatgaacgaatttgatgga
aaagttgtgtatggtgaaaaacaattgaacagaggttcaaactacgattatcacgtacaa
gaaatgacgccatcagttgtgcatcttcagcgtttagaagctgaagctcaagtaacatat
ttaaagagatttcatttagttgcataa
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