Trichogramma pretiosum: 106648723
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Entry
106648723 CDS
T07644
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106648723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106648723
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106648723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_Vps41
eIF2A
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_WDR11_2nd
PROPPIN
Beta-prop_ACSF4
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
106648723
NCBI-ProteinID:
XP_023313552
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MQFDQTVMSLPNMSVPPPTVLSAPPPTPVNIPPPALPQIPGTASNYVRHPGKGFFKSFKP
YHAPKIASSQDVVQDEFDGKRLRKSVMRKTVDYNSGIIKALENRVWQRDYRDRQALQPDV
IYTPDLLPPPSYMDNPINCVTTKFVKTATNKMRCPIFSMAWTPEGRRLVTGASSGEFTLW
NGLTYNFETILQAHDSPVRTMVWSHSESWMVTGDHAGFVKYWQSNMNNVKMFQAHKEAIR
GLSFSPSDSKLATCSDDGTVRIWDFLRCQEERILRGHGADVKCVDWHPQKSLVVSGSKDN
QQPVKLWDPKTSKSLATLHAHKSTVMDIKWNENGNWFITASRDHLLKLFDIRNLSSEIQT
FRGHKKEVSCVAWHPYHEGLFCSGGSDGDILFWHVGTDKEVGAIEQAHDSIVWTLAWHPL
GHILCSGSNDHTSKFWTRNRPGDTMRDKYNLNILPAGAEGVDDQETADKNLIIPGMGPED
RIVIEEDVEKDKENIPGLDLENVTDDSKKNVTKKVPYSKPIPRNFQAQWNEAEADDVEQA
EALNTIVNQIIETTPGAVPLNEVTPNAIILYGKMIPVEAGSKLAEAITQGTEAINKLVLS
GEIEELRNVVNVEQDIEESEDYLRDEGDVDYSKVPDVELPPPLASSKFAQNPELLNALNR
GGKRKFEQLISAQDSNSNDKSSMSQSGFNRIEDARINDVAPSYFTTESSVKSHFDDQNKQ
YSGPDSMPGYSNFSASSSSFNNSLNNPLNQKYLGSNKIKTENNMHESFDYKHMPPRGPNS
FFNSNSDEINSHNMPRGNWSSFPPPPPNMPMGIPPQNQNQMRYPPHNNFQNNPNMRHMGN
NSNHQSHGNFSSPPPPFFRGQNRNENNYNRLPNFGNQNQNQNSFNRNEFKRVRITAM
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcgaccaaacagttatgagtcttccgaacatgtcggtaccaccgccgacggtg
ttgagtgcaccacctccgactcccgttaatattccacctcctgctttaccccagattcct
ggaacagcatctaactatgtgcgtcatccaggtaaagggttttttaagtcttttaaacca
tatcatgcaccaaagatcgctagcagtcaagatgttgtgcaagatgaatttgatggtaaa
aggctacgcaaatcagtcatgagaaaaactgtagattataactcaggaataatcaaagcc
cttgagaatcgtgtttggcaacgtgattatcgtgacaggcaagctttacagccagatgta
atttatacacctgacttacttcctccaccaagctatatggataatcctattaactgcgtt
acaacgaaatttgtcaagacagctacaaataaaatgaggtgtccaattttttcaatggct
tggactccagaagggagacgtcttgtgactggtgcatcaagtggagaatttacattatgg
aatggcttaacctataattttgaaactatattgcaagctcacgatagtcctgttaggaca
atggtatggtctcacagcgaaagttggatggtaactggcgatcatgctggatttgtcaag
tattggcaaagtaatatgaacaatgtaaaaatgttccaagcacataaagaagctatacgt
ggattgagttttagtccatcagatagtaaactagcaacatgtagtgatgatggtactgta
agaatttgggactttctacgctgtcaagaagaacgtatattacgtggacacggtgccgat
gtaaagtgcgtagattggcatccacaaaaatccttagtggtttcaggaagtaaagataat
caacaaccagtcaaattatgggatccaaaaacaagtaaatcattggctactcttcatgca
cataaatcaactgttatggatattaaatggaatgaaaatgggaattggttcataacagct
tctcgagatcatcttttgaaactatttgatataagaaatcttagttcagaaattcaaaca
tttcgaggacataaaaaagaagtttcttgtgtggcttggcatccttatcatgaaggttta
ttttgtagtggtggaagtgatggagatattctcttttggcatgttggaactgataaggaa
gttggtgctattgaacaagctcatgatagtattgtatggacattagcttggcatccactt
ggacatattctttgctctggcagtaatgatcatacatcaaaattttggacacgcaataga
cctggagatacaatgcgagataaatataatctcaacatacttcctgcaggtgcagaagga
gtagatgaccaagaaacagctgataaaaacttgatcataccaggaatgggtcctgaagat
agaattgttattgaagaagatgttgaaaaagataaagaaaacatacctggccttgatctt
gaaaatgttactgatgacagtaaaaagaatgttaccaaaaaagttccttatagtaagcct
atacctcgaaacttccaagcgcaatggaatgaagctgaagcagatgatgttgaacaagca
gaagctttaaatacaattgttaatcaaattattgaaacaacacctggtgctgttcctctg
aacgaagtgactccaaatgctataatattgtatggaaaaatgattcctgtggaagcagga
tcgaaacttgctgaagctattactcaaggtactgaagccattaataaacttgttttgtct
ggagaaatagaagaacttcggaatgtagtgaatgttgaacaagatattgaagaaagtgaa
gattatttacgagatgaaggtgatgtagattattctaaggttcccgatgtagaacttcct
cctccgttggcaagttcaaagtttgctcaaaatcctgaactgcttaatgctttaaacaga
ggaggtaaacgaaaatttgagcaattgattagtgcacaagatagtaattcaaatgacaag
tctagcatgagtcaatcaggttttaaccgtattgaggatgctaggataaatgatgtggct
ccaagttattttactacagaatcttcagttaaatctcactttgatgatcaaaataaacaa
tattctggccctgatagtatgccaggatatagtaatttcagtgcttcttcctcaagcttc
aataacagtctaaataatcccttgaaccaaaaatatcttggtagcaataaaataaaaaca
gagaacaacatgcatgaatcttttgattataagcacatgccaccacgaggccctaactca
tttttcaatagtaattcagatgaaattaattcacacaatatgccaagaggtaattggtca
tcatttccacctccacctccaaatatgccaatgggtataccaccacagaaccaaaatcaa
atgagataccctccacacaacaactttcaaaataatcctaatatgcgtcacatgggaaat
aattcaaatcatcaatctcatggaaacttttcttctcctccaccacccttttttaggggc
caaaaccgtaatgaaaataattataatcgactacctaatttcggaaaccaaaatcaaaat
caaaattcattcaatagaaatgaatttaaaagagtcagaattactgccatgtaa
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