Trichogramma pretiosum: 106649380
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Entry
106649380 CDS
T07644
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106649380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106649380
03012 Translation factors [BR:
tpre03012
]
106649380
Enzymes [BR:
tpre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106649380
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106649380
Translation factors [BR:
tpre03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106649380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
HA2_C
HA2_N
AAA_22
nSTAND3
AAA_19
NACHT
NPHP3_N
ATPase
ResIII
AAA_16
Cas3-like_C_2
AAA_23
AAA_7
T2SSE
TsaE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
106649380
NCBI-ProteinID:
XP_014222237
LinkDB
All DBs
Position
Unknown
AA seq
996 aa
AA seq
DB search
MSHKHRGKGAYSKHGRRETDDFHLYEGSTSDKSRGRKDKSAKDRSPHRKDKQSHSGPSHP
PGLKGKEIGLYYRDKQKAKNARKDDTVTLKLHPSTERQIKDLIDVPKSSYDKHFNLKDVG
DDTSFESRYNHINESQFKKKFLSIITGTLNENLEKALAEKSKLVRNERLDIQLLDELAEQ
QAQPRYKKMMEFRMKLPAYEKKQDIINLLSSNQVILISGETGCGKTTQVAQFLLDYELEC
GRGSTTNIICTQPRRISAVSVAERVAAERADRLGNSVGYHIRLERKLARPYGSVTFCTTA
MLLQFLQMDPALKNYSHIILDEIHERSTQSDFIITLLKQILPRRPTLKLILMSATLNSEQ
FSKYYDKCPTLHIPGFTYPVEEYYLEDVLHLTNFKFEENIVYTNGKKRMKKQEAANDTFE
KFIGPYIRQLQHTKKYPQRVLDQLKNPKSEELSIDLVFELVRHICSQRNNPGAILIFLPG
VMDITKLHRQMQDSHFFPSSRYDIYPLHSRMPTIDQKRVFQVPRNEVRKIIIATSIAETS
ITIEDVVYVIDCGRTKLTNFQVKNNLDTLDSEWISEANALQRKGRAGRVKAGICYHLYTK
CRAAAFDKYPLPEMLRTRLDEVILQVKILQIGKADRFLASMMDPPEAKAIDLSLKLLREL
NALDEKENLTPLGYHLARLPLDPRTGKMIIWAAMFSCIDPVFSIAASLSFKDAFYCPMNK
EEEARKKKLELGQNQYSDHIALAEALSTYEELSSQPGNAAYSFCRRYFLSWNTLKLLSDM
KQQFARYLCEMKFLANSNPKDGSANTNSLNKSLVKAIVCAGLYPNVAIVKGVTKGGVRCV
TTEEEKVKLHISSINDKARSFPSPYLTYYLKRKSTGIFLFDTTCVSPWALLFASPNANGA
ISSKSNKSIIKLGPMLQFNCESGTAHIFQKLHKKLDALLENKINHPGTIDWNSNEGNILR
AIILLLSVGDENMGVDSGRYDYSVTYDENSASDLDD
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcataaacacagaggaaaaggagcctacagtaaacatggcagaagagaaactgat
gactttcatctatatgaaggctcaacttctgataaatcaagaggacgcaaagacaagagc
gcaaaagacagaagtcctcaccgcaaagataaacaaagtcacagtggtccaagccatcca
ccaggattaaaaggcaaagaaataggtttatattatagggataaacaaaaggccaaaaat
gccaggaaggatgatacagttaccttgaagctacatcctagtacagaaaggcaaattaaa
gacttaatagacgttccaaaaagttcctacgataagcattttaatcttaaggatgttggt
gatgatactagttttgaatctagatataatcacataaatgaatctcaatttaaaaagaaa
ttcttgagtataataactggtactctgaatgaaaatctggaaaaagctttagctgaaaaa
tccaaattagttagaaatgaaagattagatatacagttactagatgaattagctgagcaa
caagcccaacctaggtataaaaaaatgatggaatttcgtatgaaattaccagcttacgaa
aagaagcaagacataataaatttattaagttctaatcaagttattttaattagtggtgaa
actggttgtggaaagacaacacaagtggcccaatttcttttggactatgaactcgaatgt
ggaagaggtagcacaacgaatattatatgcacacaacctcgaagaatttcagctgtgtcg
gtggctgaaagagttgctgcagaaagggcagatagacttggaaattcagttggatatcat
attcgtctggaacgaaaattagcaagaccttatggcagcgtcacattttgtactacagct
atgttattacaattcttacaaatggatcctgcattgaaaaattattctcacataatttta
gatgaaattcatgaacgtagtacccaaagtgacttcatcattactttattaaaacaaatt
ttacccaggagacctactctcaagcttatactgatgagtgccacgttaaattctgagcaa
ttttcaaaatattatgacaaatgtccaactttgcacatcccaggatttacatatccagta
gaagaatattacttggaagatgtactacatctcacaaatttcaaatttgaagaaaatatt
gtatatactaatggaaaaaaacgcatgaaaaaacaagaagcggcaaacgacacttttgaa
aaattcattgggccttatattagacagttgcaacatacaaaaaagtatccgcaaagagtt
ttggatcagttaaaaaatccaaaaagcgaagaactctcgattgatctcgtctttgaatta
gtgaggcacatttgctcacagagaaataatcctggagcaattttaatctttctacccggc
gtgatggatatcactaaattgcataggcagatgcaagatagtcatttcttcccctcgagc
aggtacgatatatacccgctgcactcgaggatgcctaccatagaccagaagcgcgtgttc
caagtaccgcgcaacgaggtgcgcaaaataatcatcgccacctcgatcgcggaaacgtcg
atcacgatcgaggacgtcgtctacgtgatcgattgcggcagaacgaagcttaccaatttc
caagtgaagaataacttggacacattggactcggaatggatcagcgaggcgaacgccctg
caacgcaagggacgtgctggcagagtcaaagctggaatctgctatcatctttacacgaaa
tgccgagccgctgccttcgacaagtatcctctaccggaaatgttgagaacgcgcttggac
gaagtcatattgcaggtgaaaattctccagatcggcaaagctgacagatttttagccagt
atgatggacccgccagaagccaaggcgatcgatctctcgctcaaattattgcgcgaactc
aatgccctggacgagaaggagaacctcactccattgggctatcacttggctcgtttgcct
ctcgaccccagaacaggcaaaatgataatttgggcagccatgttctcgtgcatcgatccg
gtcttctccatagccgccagtctgtcgttcaaggacgccttctactgtcccatgaacaag
gaggaggaggcgcgcaagaagaagctcgaactgggccagaatcagtacagcgatcacatc
gccctggccgaggcgctgagcacctacgaggagctgagctcgcagcccggcaacgccgcc
tacagcttctgccgtaggtactttctgtcctggaacacgctcaagctgctgtcggacatg
aagcaacagttcgcccgctacctgtgcgaaatgaaattcttggccaacagcaatccgaag
gacggctcggcgaataccaattcgctaaacaagtccctcgtcaaagccattgtctgcgcc
ggcttgtatccgaacgtggccattgtcaaaggggtcacgaaaggcggcgtcagatgcgtg
actacggaagaagagaaggtgaaattgcacatatccagcataaacgataaagcgcgctcg
tttccgagtccttatctcacttactacttaaaaagaaagtccacgggaattttcttgttc
gatacgacttgcgtaagtccctgggctttgcttttcgcatctcctaatgcaaatggcgcg
ataagttcaaaaagtaataagagcataatcaaactaggtcctatgctgcaatttaattgc
gagtcaggcactgcgcatatatttcagaaattgcacaaaaagctcgacgctttattagag
aataaaattaatcatccaggaaccatcgactggaacagtaacgagggtaatattttaagg
gctatcatcctgcttttatcagtaggcgatgagaacatgggcgtagattccggacgttac
gattactccgtaacgtacgacgaaaatagtgcatccgatctcgacgattag
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