Trichogramma pretiosum: 106649388
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Entry
106649388 CDS
T07644
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03040
Spliceosome
tpre04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106649388
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106649388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpre03041
]
106649388
04121 Ubiquitin system [BR:
tpre04121
]
106649388
03400 DNA repair and recombination proteins [BR:
tpre03400
]
106649388
Enzymes [BR:
tpre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106649388
Spliceosome [BR:
tpre03041
]
Complex B
Other components
Prp19 complex
106649388
Complex C
Prp19-CDC5 complex
106649388
Ubiquitin system [BR:
tpre04121
]
Ubiquitin ligases (E3)
U-box type E3
106649388
DNA repair and recombination proteins [BR:
tpre03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
106649388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Prp19
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
eIF2A
U-box
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Nucleoporin_N
WD40_like
RMC1_N
PAS_11
Cytochrom_D1
zf-Nse
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
106649388
NCBI-ProteinID:
XP_014222249
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MSLTCAISNEVPDHPVISPVSGAIFEKRLIEKYVNEAGVDPVNGQELTIEQLIEVKTPPV
TKPKPPSATSIPAILKILQDEWDAVMLHSFTLKQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGIAQNATAQPALAAEAGGIAAQPTEQAGITEDVIQKLQEKAT
VLTQERKRRGRSVPEELVSQENIRSFQTLASHPGLHSASVPGILALDIHASDTSKILTGG
ADKNATVFNKDTEQIVAVLKGHSKKITKVVYHPEEDVAITASSDSTIRIWNVQTCQTSLL
LKAHEAPVNGLSLHPTGDYLLSSSLDSYWAFSDIRTGRLLTKVSGQSQQPLTTAQFHPDG
LIFGTGTADSQVKIWDLKEQSNVANFPGHTGPITAISFSENGYYLATSAEDSCVKLWDLR
KLKNFKTLQLDEGYEVKDICFDQSGTYLAIAGTDVRVYLCKMWSELKILNDHTALATGVR
FGKHAQYVASTSMDRTLKLYGQA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcacctgcgcaatttcgaacgaggtgccggatcatccagtgatctcaccggtg
tctggagcaattttcgagaaacggctaatcgagaagtacgtcaatgaagccggagttgat
ccagtcaacggccaagaactgacaatcgagcaattgattgaagtcaaaactccaccagtt
acaaagccaaaacctccaagtgctacatctatacctgctattttgaaaatccttcaagat
gagtgggatgctgttatgctgcactcttttactttgaagcaacaattgcaaacagcaaga
caagaactttctcatgcattatatcagcatgacgctgcatgtagagtaattgctcgatta
acaaaggaagtaacggctgctagagaagctttggccacattaaaaccacaagctggaatt
gcccaaaatgctacagctcaaccagcactggctgcagaagctggtggtattgcagctcaa
cctacagaacaagctggcattacagaagatgtcattcagaaattgcaagaaaaagctact
gttctcacacaagaaagaaagagaagaggtcgatctgttccagaggaattggtttcccaa
gaaaatatacgatcatttcaaactctggcttcacatcctggtcttcactcagcaagtgtt
cctggtattttagctttggacattcatgcttctgacacaagtaaaattttgacaggagga
gcagataaaaatgctacagtatttaataaagacacagaacaaattgttgctgtactgaaa
ggtcattccaaaaagattaccaaagttgtttaccatccagaagaagatgttgctattact
gcatcatctgactctacaattcgtatctggaatgttcaaacatgtcaaacttctctttta
ctcaaagctcatgaagcacccgtcaatggtctctcattacatcctactggtgattatctt
ttaagttcatccctagactcctattgggctttctctgacatacgtactggaagattattg
acaaaggtttctggccaaagtcaacaaccactcactacagcacaattccatcctgatgga
ttgatttttggtactggaacagcagattcacaagtgaaaatttgggatttgaaggaacaa
tctaatgtagccaacttccctggtcacactggaccaattacagctattagtttttcagag
aatggttactatttagcgacgtcagctgaagattcatgtgtaaaactatgggatctgcgt
aaattgaaaaatttcaaaaccctgcaacttgacgagggttacgaagttaaagacatttgt
tttgaccaaagtggtacttatttagctatcgctggaactgatgttagggtatacttatgt
aaaatgtggagtgaattgaaaatcttgaacgatcacactgcacttgccactggtgtgaga
tttggaaaacacgctcagtacgttgcatccacgagtatggatagaacgctgaagctttat
ggacaggcgtaa
DBGET
integrated database retrieval system
