Trichogramma pretiosum: 106649618
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Entry
106649618 CDS
T07644
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106649618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106649618
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106649618
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
106649618
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
S1_RRP4
PCB_OB
Motif
Other DBs
NCBI-GeneID:
106649618
NCBI-ProteinID:
XP_014222578
LinkDB
All DBs
Position
Unknown
AA seq
198 aa
AA seq
DB search
MNTKDPIICSPGQRLCQANKQYIAGQGTYEELGYIYSKFAGTVKVIEKDETYTIEAHGLP
DPTIVPAPGDIITALVTLVNQRFAKCDIKCVGDVTLSKKYRGILRREEVRATEKDRIEMY
KSFRPGDIILARVLPMTEAHTFQLTTAEDELGVVIAESAEGAQMVPVSWTEMQCSKTSIR
EPRKVAKVVPEDVALGKK
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaaagaccctatcatttgctctccagggcaacgactttgtcaggcaaacaaa
caatacattgctggacaagggacatacgaagaacttgggtatatatactcaaaatttgct
ggaactgtaaaagtcatagagaaagatgaaacatatacaattgaggcgcatggactgcca
gacccgaccattgttccggctccaggagatattataactgcattggtaacattagttaat
caaagatttgccaaatgcgacataaaatgtgtaggagatgttacattaagcaaaaagtac
agaggtattttaagaagagaagaagtcagagccacagaaaaagatagaattgagatgtac
aaatcctttcgaccaggggacataatccttgctcgagttctaccaatgactgaagcacac
acatttcaacttacaactgctgaagatgaactaggagttgttattgccgagagcgccgaa
ggagcacaaatggtccctgtaagttggacagaaatgcagtgttccaaaacatccatcaga
gaacctagaaaggtggcaaaagttgtgccggaagatgtagctctaggaaaaaaataa
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