Trichogramma pretiosum: 106649845
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Entry
106649845 CDS
T07644
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106649845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpre03009
]
106649845
Ribosome biogenesis [BR:
tpre03009
]
Eukaryotic type
Pre-60S particles
RNases
106649845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
106649845
NCBI-ProteinID:
XP_014222990
LinkDB
All DBs
Position
Unknown
AA seq
1221 aa
AA seq
DB search
MLPSTGYFKGINCPFYENGYCERPYCHFRHTRKDGATTSTAIVSESISKAQQVEKNEASP
LNSANSEVLQKISEAVKKALADENLTDADSIANKVVEGLNKKLVSNVLTTSISNNDTSSI
VSSSKHSKVSPPLQYTPTPIAELKKRHLPVPAYELTRESKAVKRKVSGNEKPWMDIIRNV
GTAKESAPSYIPTAINPSKPINKNSTLEYIPSTKYDSYLDACETTSINDDAYVPEKIKRK
DDAYYPKPKKRREEYVPRKPKVPLNIHFNDESYEDLEKITYNPELNISSAQDKSDDIMEI
PLTTIEKPLDEEVITVSDDEDCNDHSNLDLLLSKVFEDEVVEKTIVKTEKVDHIVENLND
NNSDVLRFRKESIKTEKNDPLMVLEDIPNVDPKLGKIINESIKLEKDAQKTKEIDIRNTL
NQKEDIEHQKNKEVDSRYSKAKDKDKNKEKERRTDKEHEEKKNKEKIKDKDDKKSREKDK
HKHISRSNEKDRSSSSSRDRKRDKDSRSKESSSTSSRRRSKSEKDKRSSSKDSRDKRECK
DKSNHRTEEKDKSRSKSSSTEHKSKSSSHRSSSNKSSHSHKSDKATDDLKNISAEKSSDI
NKCDSPEYEEFSPINDNSLFDESDSEYDVEEECRKIFQEYEVIEQPKEVKTESKPNVEEP
EEIGKKRIAHASASTNIIKSVGPTQVQKRLPNPQQKMYERWRLSKEIAAKKSEEKEAHTD
KVSMKMANEKTSNPGSTSHKESTVNGNNRVRIAGVPYAMLLALEKKKVMQQVTKVETKTI
AQTQKGKGARVAHVPQVVPQLTRPEPIQPSGTAKFPLNVRQFYVNAMQDICVQIYDCHDD
AAQRATREELTCYEKCKALNVYKNSCMLTVHRLRKEVDQKSAEPTTSAGAGMVSHEAILL
GKVKGSFSVVKPKKFIVNFKGETLYNKLSKWILTDQQLKDNGFPRPHPEGPKGRAKLYSY
STRGQSNPSKVPNQRFCCRCNKPFMVDKHGIPIKKENCIYHYARKFTFRGESKYMCCKQD
GSSDGCCDAPTHVWDLLDLENLRGFVKTLDKDDSAPEKQGVYALDCEMCYTTQGLELARV
TVINDDCEVIYETLVKPTNPIIDYNTRFSGITEEHMENVTTTLLDVQATLLSMFSSKTIL
VGHSLESDFKVMKLLHDTVVDTSIMFPHKNGPPFKRALKNLCSDYLRKIIQNDVAGHDSK
EDAVACMELIVWKVKEEAKLQ
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgcttccatcaacaggttattttaaaggcatcaattgtccgttttatgaaaacggctat
tgtgagcggccttactgtcactttagacatacacgaaaagatggagctaccacatctaca
gctattgtttctgaatcaatatcaaaagctcaacaagttgagaagaatgaagctagtcca
ttgaattctgccaattctgaagtacttcagaaaatcagtgaagctgtaaaaaaagcacta
gctgatgaaaatcttacagatgctgatagtattgccaataaagttgtagagggtcttaat
aaaaaactagtatcaaatgtacttacaacatctataagtaataatgatacttcttcaatt
gtatccagcagtaaacattcaaaagtatctcctccactgcagtatactccaacgccgatt
gctgaattaaaaaagcgacacttacccgtcccagcttatgaacttactcgtgaaagcaaa
gctgttaaaagaaaggtttctggtaatgaaaaaccatggatggatataattcgaaatgtt
ggtacagcaaaagaatctgcaccgtcttatataccaacagcaataaacccatctaagcca
attaataaaaattcaactcttgaatatattccatctacaaaatatgattcctacttagat
gcatgtgaaactactagcattaatgatgatgcatatgtaccagaaaaaatcaagagaaag
gatgacgcatattatcctaaaccaaaaaaacgaagagaagaatatgtaccaagaaaacca
aaagtaccattaaacatacattttaatgatgaatcttatgaggatcttgagaaaattaca
tacaacccagaactcaatataagttctgcacaagataaatctgatgatattatggaaatc
ccactgacaacaattgaaaagcctttggatgaagaagttattactgtatcagatgatgaa
gattgtaatgatcattctaatttagatctattactcagtaaagtttttgaagatgaagtg
gtagaaaaaacgattgttaaaacagaaaaggtggatcacattgttgaaaatttgaatgat
aataattcagatgtactgagatttagaaaagaatccataaaaactgaaaaaaatgatcca
ttgatggttttggaagatattccaaacgttgatccaaaacttggtaagattattaatgaa
tccatcaaattggaaaaagatgctcaaaaaacgaaagaaattgatattaggaatacatta
aaccaaaaagaagatattgagcatcaaaaaaataaagaagttgattcaaggtattcaaaa
gctaaagataaagacaaaaataaggaaaaagaaagaagaacggataaagaacacgaagag
aaaaaaaataaagaaaaaattaaagataaagatgataaaaaaagtagggaaaaagataaa
cacaaacatatttctagaagtaatgaaaaagatcgttcatcatcatcttcaagagacaga
aaaagagacaaagatagtcgaagtaaagagtcgagttctacgagtagtagaagaaggagc
aaatctgaaaaagataaacgttcaagttcaaaagattctagagataagagagaatgtaag
gataaatctaatcacagaacagaagaaaaagataaaagtcgaagcaaatccagttcaaca
gaacataaaagtaaaagtagctctcacagaagttctagtaacaaaagttctcatagccat
aagtctgacaaagcaactgatgatttaaaaaatataagcgcagaaaagtcaagtgatatt
aataaatgtgatagccctgagtatgaagagttttcacctatcaatgataactcacttttt
gatgaatctgattctgagtatgatgtggaagaagaatgtagaaaaatatttcaggaatat
gaggtcatcgaacaaccaaaagaagttaagactgaatctaaaccaaatgtggaagaacca
gaagaaattgggaaaaaacgcattgctcatgcatctgcttctacaaatataataaaatca
gttggaccaactcaagttcaaaaacgccttcctaatcctcagcaaaaaatgtatgaaaga
tggcgattatcgaaagaaattgcagccaaaaaatctgaagaaaaagaagcccacactgat
aaagtttccatgaaaatggccaatgaaaaaacttccaatcctggttcaacttctcataag
gagtcaacagttaatggaaataatcgagttcgaatagctggggttccttatgctatgtta
ttggctctggaaaagaaaaaagtcatgcaacaagtaactaaagtggaaaccaagaccatt
gcacaaactcaaaaaggaaaaggtgctcgtgttgcccatgtgcctcaagtggtaccgcaa
ttaactcgaccggaacctatacaaccatcaggaacagcaaagtttccgttaaacgtgcgt
cagttttatgtaaacgctatgcaagatatttgtgtgcaaatttatgactgtcatgacgat
gctgcccaaagagctactcgcgaagaattaacttgctacgaaaagtgcaaagcactaaat
gtgtataaaaactcatgcatgttgactgtacatagactgcgtaaagaagttgatcagaaa
agtgcagagccaacaacatctgctggtgcaggtatggtttcacatgaagccatcctgttg
ggaaaagttaagggtagttttagtgttgttaaaccaaagaaattcattgtaaatttcaaa
ggtgaaacactatataataagctttcaaagtggatactgactgatcagcaactcaaagac
aatggttttccaaggccacatcctgaaggaccaaagggtcgagcaaaactatattcatac
agtacaagaggtcaatcaaatccatccaaagtgcctaaccagcgattctgctgccgttgt
aataaaccatttatggttgataagcatggcatacccataaaaaaggaaaattgtatatat
cattatgctagaaaattcacatttagaggagaaagtaaatacatgtgttgtaaacaagat
ggttcatcagatggctgttgtgatgctccaacacatgtttgggatttgctagatctcgaa
aatttaaggggttttgtaaaaacattagataaagatgattctgcccctgaaaagcaaggc
gtttacgctcttgactgtgaaatgtgttacactactcaaggtttggaacttgcacgcgtt
actgtaattaatgatgattgcgaagtcatttatgaaactttagtaaagccaacaaatcca
attattgattataatacaaggttttctggtattaccgaggaacacatggaaaatgtgaca
actacattgttagatgttcaagcaacacttctttcaatgttttcatctaaaactatactc
gtgggtcatagtttagaaagtgattttaaagtgatgaaacttttacatgatacagttgtc
gatactagcattatgtttccacataaaaatggtccacctttcaaaagagctttgaaaaat
ttatgttcagattatctccgaaaaattatacaaaatgacgttgctggtcacgatagtaag
gaagacgctgttgcttgtatggaattaattgtatggaaagtgaaagaggaggccaaactg
cagtaa
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