Trichogramma pretiosum: 106650141
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Entry
106650141 CDS
T07644
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03018
RNA degradation
tpre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106650141
09123 Folding, sorting and degradation
03018 RNA degradation
106650141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106650141
03041 Spliceosome [BR:
tpre03041
]
106650141
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106650141
mRNA degradation factors
5'-3' decay
Lsm complex
106650141
Spliceosome [BR:
tpre03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
106650141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
106650141
NCBI-ProteinID:
XP_014223476
LinkDB
All DBs
Position
Unknown
AA seq
136 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDVQMKSRGRGDIKSRGGQNQRGGRGNNRNAFAGRGGRGP
STMGRGGGGQKPKLKN
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccttatcgttattacgtacagctcaaaatcatccaatgcttgtagaattgaaa
aatggagaaacttacaatggccacctagtgagctgtgataattggatgaatatcaatctg
cgtgaagttatttgtacttcaagggatggtgataaattttggagaatgccagaatgttac
attagaggtagtacaattaagtatcttagaattcctgatgaagtaatagatatggtcaag
gaagatgtacaaatgaaatcgagaggacgaggagacatcaaaagcagaggtggacaaaat
caaagaggtggtcgtggaaacaatagaaacgcatttgctggaagaggaggaagaggacca
tcaacaatgggcagaggtggtggaggtcaaaaaccaaaattaaaaaattag
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