Trichogramma pretiosum: 106650180
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Entry
106650180 CDS
T07644
Name
(RefSeq) histone-binding protein RBBP4 isoform X2
KO
K10752
histone-binding protein RBBP4
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03082
ATP-dependent chromatin remodeling
tpre03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106650180
03083 Polycomb repressive complex
106650180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpre03036
]
106650180
Chromosome and associated proteins [BR:
tpre03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106650180
Histone modification proteins
HAT complexes
HATB complex
106650180
HDAC complexes
Sin3A-HDAC complex
106650180
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106650180
PRC2.2
106650180
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
106650180
Heterochromatin formation proteins
Other heterochromatin formation proteins
106650180
Chromatin remodeling factors
NuRD complex
106650180
NuRF complex
106650180
NuRF complex (fruit fly)
106650180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
MIOS_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
106650180
NCBI-ProteinID:
XP_014223554
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MEPVRKNPDPRRTIDGFDEAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLP
DVTKPEGKDYTVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDSEKGEFGGFGSV
SGKIEIEIKINHEGEVNRARFMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDL
RLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE
DVAWHLLHESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILAT
GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG
EEQQPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYND
EEPETTTGELETNAL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagtacggaaaaatcccgaccctcgccggacaatcgatggatttgacgaagct
gttgaagaaagagtcattaacgaggagtacaaaatatggaaaaagaatactccttttttg
tatgacctcgttatgacccatgccttggaatggccttcgttgacagctcaatggttgccc
gatgtcaccaaacctgaaggaaaagattacactgtccatcgtctcattcttggaactcat
acttctgatgaacagaaccacttgcttatagctagcgtccaacttcccaatgaagatgct
cagtttgatgcttctcattacgatagtgaaaaaggtgaatttggcgggtttggttcagtc
agtggaaagatagaaattgagattaaaatcaatcatgaaggagaagtaaatagagcaagg
tttatgccacaaaatccttgtgtaattgctaccaaaaccccatctagtgatgttctggta
tttgactatacaaagcatccaagcaaacctgatccaaatggcgaatgccatccagatttg
agattgagaggacaccaaaaagaaggttatggtttatcatggaatccaaacttgaatggg
tacctccttagtgcttctgatgatcatactatttgtctgtgggacatcaatgcaactcca
aaggaaaatcgagtcattgatgcaaagactatctttactggtcatactgccgttgtggaa
gatgttgcctggcatctacttcatgaatccttatttggctctgtcgcagatgaccagaag
ttgatgatttgggacaccaggtgtaacaatactagtaaacctagccacacagtagatgct
catacagctgaagtgaattgtctaagtttcaatccatactcagaatttatcttagccact
ggtagcgctgataaaactgtggcgttatgggacttgagaaatttaaaattgaaattacat
tcatttgaatctcataaggatgaaatattccaagttcaatggtcccctcataacgaaact
attctggctagcagtggtactgataggcgcctgcatgtttgggatttaagcaaaattgga
gaggaacaacaacccgaagatgccgaagatggtcctcctgaacttttgttcattcatggt
ggacacactgctaaaatcagtgatttctcgtggaatccgaatgaaccatgggtaatttgt
tcagtatctgaagataatataatgcaggtgtggcaaatggctgaaaatatttataatgat
gaagagccagaaactacgactggtgaattagaaactaacgccctgtaa
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integrated database retrieval system
