Trichogramma pretiosum: 106650347
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Entry
106650347 CDS
T07644
Name
(RefSeq) transcription elongation factor SPT5-like isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106650347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpre03021
]
106650347
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106650347
Transcription machinery [BR:
tpre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
106650347
RNA polymerase I system
106650347
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
106650347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOW5_SPT5
Spt5-NGN
KOW2_Spt5
KOWx_SPT5
Spt5_N
KOW1_SPT5
CTD
KOW7_SPT5
Motif
Other DBs
NCBI-GeneID:
106650347
NCBI-ProteinID:
XP_014223777
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MSTRSLRSRSRSVSSETSNSSWSRRSAKSDKSNEDNESGVGSVRADDDIANDSFTARESS
DDDAGSGSDNNDTQNDGDSFDSFSEDDEKQRPKKKPKKLVSDFILQEAEVDDDAEDEEEW
EDGAHELGIVENEIEELGPTARDIEGRRRISNMWDSQKEEEIEEYLRNKYASEAAHSKRF
GDGGEDMNNEITQKTLLPDVKDPNLWLVKCRIGEENATILLLHRKYLTFEDTDEALKIKS
AVAPRGIKGFIYVEAYKQVHVKAAIENISTLKMGYWQQKMVPIKEMTDVLRVTNRVNLKP
LQWVRIKRGLYKDDIAQVDYVDVGQNKAHLKLLPRIDYLKLRGALRLMSDEKDEPVKRKK
KGSRPAQKPFDPEAIRAIGGDITSSGDYLVFEGNHYSHKGFLYKDFNLNAIVSDSVKPTL
SEIESFEENPENVNLELNQNDPFTSQRGIVTHSFSVGDNVEVCEGELANLLGKVISVDGN
SVQVAANHEQLKEPIEFPVRELKKYFVIGDHVKVLSGKYEGDTGLIVRIEGNRAVLFSDL
SMHELEVLTSNLQLCPDIATGVDSLGKFQWGDMVQIDPQSVGVIVRLERENFQLLTMHGR
LIDVKPGSISKYRENKNTLALDCQQNAIRRKDIVKVVEGLHAGRQGEIKHLYRSFAFLHS
KIYIDTGGMLVCKTRHLQLVGGSKSDSVVNYTTPIFMSPARSERSVDENNDKNKGRNYTR
IGNLGPSRDRKIIGHTIKITGGPYKGNIGFVKDATESTARVELHSPCQTISVDRSHIFSI
SQPDTANQDQNLSTPMYREYGKKTPSHPSGSQTPMHGSQTPMHGSQTPLYETGNRTPYYG
SITPQQDGSRTPNPTGAWDPTVSNTPARSSEYDDRDGNNDSMEDVPFSPYQESQTSSMAT
PYDPANASFDTQSESPSVTPNIDFHYSESPASPTGLTDASPQIDYSPFNSTADQPSSPME
NNTSEVNVADNKDTEPPFYGSPASPEANDNDTEPNFNGSPASPEMNDHNDTKPIFYGSLD
SPNVNGNNDTEPTFYGSPASPEFNDQKDIKPIFYGSPASPGS
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgagatcattgcgttcacgctcgaggagcgtttctagcgaaacttctaattct
tcatggagtcgtaggtccgcaaaaagtgataaatccaatgaagataatgaatcgggagtt
ggttctgtgagagctgacgacgatatagccaacgattcgttcactgccagagaaagcagt
gacgacgatgctggttccgggtctgataataacgatacccaaaatgatggagattctttt
gatagtttttccgaagatgatgaaaagcaaagacccaagaaaaagccaaaaaagttagtt
agtgatttcattttacaagaagcagaagttgatgacgatgcagaagatgaagaagaatgg
gaagatggtgcccatgaactaggtatcgttgaaaatgaaattgaagagctgggtccaact
gcaagggatatcgaaggccgcagaagaatctctaacatgtgggattcacaaaaagaggaa
gaaattgaagaataccttcgaaataaatatgcgagcgaagctgctcattcgaaaagattt
ggagatgggggagaagatatgaataatgaaataactcaaaaaacattgttaccggatgtc
aaggatcctaatctttggttagtcaagtgtcgcattggtgaagaaaatgctacaatttta
ctgttgcatcgaaaatacctaacttttgaagatacagatgaagcacttaaaataaaaagt
gcagttgcccctagaggaattaagggctttatttatgttgaggcttataaacaagttcat
gttaaagctgcaattgaaaatataagtacattgaaaatgggttattggcaacaaaaaatg
gtaccaatcaaagaaatgacagatgtattaagagtcacaaatcgtgttaatttgaaacct
cttcaatgggtacgaattaaaagaggactttacaaagatgacattgctcaagtagactat
gttgatgttgggcaaaataaagctcacttaaaacttttacctagaatagattatttaaaa
ttacgaggggcattaaggttgatgtctgatgaaaaagatgaaccagtaaagcgtaagaaa
aaaggtagcagaccagcacagaagccttttgacccagaagcaattcgtgcaattggtggt
gatattacaagtagtggagactatttagtatttgaaggaaatcattacagtcataaaggc
tttctttacaaagatttcaatttaaatgcaatagtatcagatagtgttaaacctacctta
tctgaaattgaaagttttgaagaaaatccagagaatgtaaaccttgaattgaatcaaaat
gatccttttacaagtcaaagaggaattgtaactcattcattcagcgttggtgacaatgtt
gaagtctgtgaaggggaattagctaacttacttggcaaagttatttctgttgatggaaat
tctgttcaagttgcagcaaatcatgaacaattaaaagagccaatagaatttcctgtaagg
gaattgaaaaaatattttgtcattggtgaccatgtcaaggtactctctggcaaatatgaa
ggagacacaggattgatagttagaatagaaggaaatcgagcagttttattttctgattta
tctatgcatgagctcgaagttcttacaagtaacttacagctatgtcctgacattgctaca
ggcgtcgatagtctaggaaaatttcaatggggtgatatggtacaaatagatcctcaatct
gttggagtaattgtcagattggagcgtgaaaattttcaactgcttacaatgcacggtcga
ttaatagatgttaaacctgggagtatttctaagtacagagagaacaaaaatacccttgca
ttggattgtcagcaaaatgctattagaagaaaagacattgtcaaagttgttgaaggctta
catgctggaagacaaggagaaattaaacatttgtatagaagttttgcgtttcttcactca
aaaatttacattgatactggtggaatgttagtttgtaaaacaagacatttgcaattagtt
ggtggtagtaaaagcgactctgtagtaaactatactactccgatattcatgtcacctgca
cgatctgaaagaagtgtagatgaaaataatgacaaaaataaaggccgaaattatactcgt
atcggtaatttgggtcctagccgcgatcgaaaaattatcggacatactattaagataaca
ggtggtccttacaaaggaaatatcggatttgtcaaagatgcaaccgaatcaacagctcga
gttgaactgcattcaccctgtcagacaatatcagtcgatcgatcgcacatatttagtata
agtcagcctgatacagcaaatcaagatcaaaatcttagtactccaatgtatagagaatat
gggaaaaaaactccatcgcatccaagtggttcacagacgcctatgcatggttcacaaaca
ccgatgcacggttcacagacacctctatacgaaactggcaatcgaacaccctactacgga
tcaattacgccgcaacaagatggttctcgtactccaaaccctactggagcatgggatcct
acggtttctaacacgccagctagaagcagtgaatatgatgacagggatggaaacaatgat
agtatggaagatgtcccattctcaccatatcaagaatctcaaacatcttccatggctact
ccatacgatcctgctaacgcgagctttgacacccagagtgaaagtcctagtgttacacca
aatatagatttccattactccgaatcgccggcgtcacccaccggattaactgatgcaagt
cctcaaattgattactcaccatttaattcaacagcggatcaaccgtcatctccaatggaa
aataatacgtcagaagtcaatgttgcagacaataaagataccgaacctccattttacgga
tctcctgcctctccagaagctaatgacaatgataccgaacctaattttaatggatctcct
gcttctccagaaatgaatgatcataatgataccaaacctattttttatgggtctcttgac
tctccaaatgttaatggcaataatgataccgaacctactttttatggatcaccggcttct
cctgaatttaatgaccaaaaagacattaaacctattttttatggatctcctgcttctcca
ggcagctaa
DBGET
integrated database retrieval system
