Trichogramma pretiosum: 106650580
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Entry
106650580 CDS
T07644
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106650580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpre03400
]
106650580
DNA repair and recombination proteins [BR:
tpre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106650580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
106650580
NCBI-ProteinID:
XP_014224171
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
MAAAQHKILDMDAGAQQGFVNFFQNLPEKPSSTVRFFNRSDFYSLHGDDALFAAEEVFKT
TSLCKKIGPANNKIDSVILNKNTFESFVRDLLLVKQYRVEVYVNQKTSKNQDWTIEYKGS
PGNLSQFEDLLFGNNDVAVDAVVIAVKTSSDASSKHVGISCIDMVKSTISVCEFKDDENF
IDLEALIVSLKAKECVLPNENAQDLQTIKAIMERNNVLVTMKKKTEFGTDSLIQDLNLLI
RFAKGQQQNAQALPQTNLNLAMSATAALINYLNMTGDDGNSGQFTIEEIQRSRYLRLDSA
AIKALNLEPRTDLPANIQSSTSSILGILDKTRTAAGKRLLSQWVRQPLRDLAPIKERHDV
VEALLEDSELSSSLSEEHLRRVPDLQQLAKKLARKKAGLSDLYKIYQCLSHMPVMVEKLQ
SLNNVAAAKAMFLDPLKEHLEEMDKFQQMVEQTIDLEAADKGEFLVKAEFDDELKELKSQ
MDEKERKMQNLLSKVADDLSMEAGKSVKLETNPQHGYHFRCSLREDKSLRNSKNYTILDS
IKGGIRFRNKKLESLNEDYMTAKNAYTQQQKSIVVEIIDTAGGYVPPLKNLGNVIATLDV
LNSFALAASCASEVYVRPKMLPSESQELDLVQIRHPCLELQEEIDYIANDAHFTKDSRFH
IITGPNMGGKSTYIRSVGVSVLMAHIGSFVPCQRATISVLDSILARIGADDCQIKGLSTF
MAEMVETSAILRTSTSNSLVIIDELGRGTSTYDGCGIAWAIAEHLAKEVKAYCLFATHFH
EITRLSEDVSTAKNFHVKAIVDEKLTLLYQVKPGVCDQSFGIHVAKMANFPEDVIEYAKQ
KQAELEDVQGIVFEGSDDPAKKNKVLKEGEEIIKEFMENCKEFESLPEEEILPKVAELKK
QAISRNNPYINALLGVS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctcaacataaaatacttgatatggatgccggtgcccagcagggcttcgtg
aattttttccaaaatttaccggagaaaccgagcagtaccgtgaggttcttcaatcgttcg
gacttttattcccttcacggagatgatgctctgttcgcagccgaggaagttttcaaaacc
acgtctctttgcaagaaaattggtccagctaacaacaaaattgacagcgtgatactcaac
aaaaatactttcgaaagtttcgtgcgtgatttgctgctggtgaagcaatacagagtcgaa
gtttatgttaaccaaaaaacctccaaaaatcaagattggacaatcgaatacaaaggctca
cctggtaatctttctcagtttgaagatttacttttcggcaacaatgatgtggccgtcgat
gccgtcgtaatcgccgtcaaaacttccagtgatgcttcctcaaagcacgttggtatcagt
tgcatcgatatggtcaaatcgactatttccgtatgcgagttcaaagatgacgaaaatttc
attgatctcgaagcgcttattgtgtcgctcaaagctaaagagtgtgtcttaccaaacgaa
aacgctcaagatcttcaaaccattaaagctattatggagcggaacaacgtactggtaacc
atgaagaaaaaaaccgaattcggcacagactcattaatccaggatttaaatctccttatc
agatttgcaaaaggacagcagcaaaacgctcaagctttaccacagactaatttgaattta
gcaatgtcagctacagctgctctcattaattatctaaatatgactggggacgatggcaac
agcggtcaattcactatagaagaaattcagcgcagtcgttacctacgccttgattccgca
gccatcaaagccctgaatttggagcctcgaacggatttaccagcgaacatacaaagctcg
acatcgagtattctaggtattctcgataaaacccgtaccgctgctggtaagcgtttgctg
tcccaatgggtgagacaacctttgcgtgatttagcccctatcaaagagcgacacgatgtc
gtagaagctcttttggaagattctgaattaagctcgtctttgagcgaggaacacttacgt
agggttccggatttgcaacagctagctaaaaagttagccagaaagaaggctgggttgagc
gatttatacaaaatctatcaatgcttaagccacatgccagtcatggtagagaagctccaa
tctttgaataacgttgctgctgccaaagctatgtttttggacccattaaaagaacatctt
gaagaaatggacaagtttcagcagatggttgagcaaacgatcgatcttgaggccgctgat
aagggagaattcctggttaaagctgagtttgacgacgaattaaaggaactgaaatctcaa
atggacgagaaagaaagaaaaatgcagaatttattgagcaaagttgccgatgatctttct
atggaagctggaaaatctgtcaaattggaaaccaatccacaacatggttatcattttaga
tgttcgctaagagaagacaaatctttgaggaatagcaagaactacacgatattggattca
ataaagggtggcatcaggttcaggaacaaaaaattagaaagtttgaatgaagattatatg
actgcaaaaaatgcttacactcagcaacagaaaagtattgtagttgaaattattgatact
gcaggtggatacgttcctccacttaagaatcttggaaatgttattgctactctcgatgta
cttaattctttcgccttagctgcatcatgtgcaagcgaagtatatgtccgaccaaaaatg
ttaccgagtgaatctcaagaactcgatcttgttcaaataagacatccgtgcttagaattg
caagaggaaattgattacattgccaatgatgcacattttacaaaagacagtcgttttcac
atcattactggaccaaatatgggtggtaaaagtacttacataaggtccgttggtgtatct
gttctgatggcccatatcggaagttttgtaccttgccaaagagcaacaatatcagtactt
gattcaattttggcaagaattggagccgatgattgtcaaatcaaaggactttcaactttt
atggctgagatggttgaaacctcagctattttgagaacatcaacatcgaactcactggtc
attattgatgaacttggaagaggaacttcaacttatgacggatgtggcattgcgtgggct
atcgctgagcatttggcgaaagaagtcaaggcgtattgtttgtttgctactcatttccac
gaaatcacacgactgtctgaagacgtttccactgcaaaaaattttcatgttaaagcaatc
gttgatgaaaaattgaccttgctttatcaagtgaaacctggagtttgtgatcaaagtttt
ggaatccatgttgcaaaaatggcaaatttcccagaagacgttattgaatatgctaaacaa
aaacaagccgaacttgaggatgtgcaaggaatcgtatttgaaggatctgatgaccctgca
aagaaaaataaagtacttaaagaaggggaggaaatcatcaaagaattcatggaaaactgt
aaagaatttgaatctctacctgaagaagaaatcttaccaaaagtagcagaattgaagaaa
caagctatttctcgtaataatccttacatcaatgcacttttaggagtctcatga
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