Trichogramma pretiosum: 106651049
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Entry
106651049 CDS
T07644
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
tpre
Trichogramma pretiosum
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpre03036
]
106651049
Enzymes [BR:
tpre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
106651049
Chromosome and associated proteins [BR:
tpre03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106651049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
TUDOR
Helicase_C
Motif
Other DBs
NCBI-GeneID:
106651049
NCBI-ProteinID:
XP_014224868
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MMDNLETSLPKAAVEVKITNILNPYYIRLYEVQHFNSQKQKLSIQLQKQLNLIKKSAPSA
EHTKKPLVGDDILISHDSNEDLPAWICRGKVLDIESGKATIFLIDFGHSIKASLESVIKY
SPNSIPIQPLTTTVSLDNILPIDSAGNLLKVWNKSTIDSIKYYTLNSKKVFFKTTSYDIK
TKKKFGEIYLLIAEKYYQLTKILVKSCLATILNDKLLKAIINNERKDQIILLNDAPEIIK
NKSKSDKSFLNEIKQLSSATPSASNTISLTKKKLVYDKVLVKSNYDCTPLNDISDARFTS
SIHKALKCQGVWQPKQIQSYIWPAFKKKLDIVAIDAKSAGKTVSYIVGIANYLSENEIAI
MKKAKASLETKPIALILCKSVNQCLDVAKKISTLLECTKCRVFGAANSITNKEIMVEICN
KFQVMVATPPLLLKILENFSNKLDVSELSFLVLDEADIILDKYLSQVLLLIQKYKIIFKN
KSVIESETTQVICVSRTWTLQIGDFIHKFMVSPYICIGSYIEAASFSRVQGRMLIRLSSK
KNEEVLKVLSNYREVKTMIVCTHNQEAIDLDHYFRSESVETLLIHNNMLATTINQAREAW
HHFLPGMYPVIICTDDVLTDLHIWSIEYLIHYSLTDSSKTQFNRRFCVFMDNWERDKKIN
CKNLILFDETKEYVHFKGMVAILKRLNVELPKDWDKIAEGLDLKGNMKIKNHPLCVKTKS
FGSCNLDTCSYRHRVISEVDTPILNINIGDELKIHITHIFSASHFAARILECITKCKSTG
KRQIIPLSYNIFKINKELKKYYDSLENKRSVENVDIGQFYLWKDRSNNLIRLQVLLIVEK
VPETKKPKYIRARNIDNGKIIEKISAHELVDIPENLLKEETPIIDIFLTSISHHEDESDW
TDLAKDYTKSWIKNNTSEQLSLHAQVELQIGYSIFTKTLIPRQKVKGFQDLSGESLAAAL
LKENHGISNNKNLPNLLKLCQKAGFKDLNYGSTKPHCDSVEEIET
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgatggataatttagaaacatctttacctaaagcggctgtagaagtgaaaataacaaac
attctcaatccttactatatcagattatatgaagttcagcatttcaactctcaaaaacaa
aaactttctatacaactacaaaagcagctcaatttaattaaaaaatcagcaccaagtgct
gaacatacaaaaaagcctttggtgggtgatgatatcttgatctcacatgatagtaatgaa
gatttacctgcatggatatgtagaggtaaagttcttgatattgaatcaggcaaagcaaca
atttttttgattgactttggtcattcaataaaagcttcattagagtcagttatcaaatac
tcaccaaattctatacccatacaacctttaactactacagtctccttggacaacatttta
ccaatcgactctgctggaaatttgcttaaagtatggaataaatctacaatagattcaatc
aaatattatactttgaattctaaaaaagtatttttcaaaaccacatcttatgatatcaaa
acaaaaaagaaatttggagaaatatatttactcatagctgaaaaatattatcagttgaca
aagattttggttaaaagttgtttagcaacaattttgaatgataagttattgaaagctatc
ataaataatgaaagaaaggatcaaattattttattgaatgacgctccagaaataattaaa
aataaaagtaaatctgataaaagtttcctgaatgaaataaaacaactttcctctgcaaca
cctagtgcttcaaatactattagtttaactaagaaaaaactagtttatgataaagtgtta
gtcaaaagtaattatgattgtactccactaaatgatatttcagatgcaagatttacctca
tccatacataaggcactgaaatgtcaaggtgtatggcagccaaaacaaatccaaagttac
atttggccagcttttaaaaaaaaacttgatattgtagcaattgatgctaaatctgcaggt
aaaactgtcagttatattgtaggaatagcaaactatctatctgaaaatgaaattgctatc
atgaaaaaagcaaaagcatcattagaaaccaaaccaatagcattgattctatgcaaatct
gttaatcaatgcttggatgttgctaaaaagatttcaacccttctagaatgtactaaatgt
cgagtttttggggcagccaatagtataacaaacaaagaaattatggtggaaatttgtaac
aaatttcaagttatggtcgccactccaccattgttgcttaaaattctagaaaatttttca
aataaacttgacgtctctgaattatcttttttagttttagatgaagcagatataattttg
gacaaatatttgagtcaagtattgcttttaattcaaaaatataaaattattttcaaaaat
aaaagtgtcattgaaagtgagactacacaagttatatgtgtttcaagaacttggacactt
caaattggtgattttatacataaatttatggtatctccttatatttgtattggatcttac
atagaagcagcttctttttcaagagttcaaggaagaatgttgataagactttctagtaaa
aaaaatgaagaagttctaaaagttttaagtaattatcgagaggtcaaaactatgattgtt
tgtacccacaatcaagaagctatcgatttagatcattattttagatcagagtcagttgaa
acacttttgattcataataacatgctagctactacaattaatcaagctagagaagcttgg
catcattttttacctggaatgtacccagttataatatgtactgatgatgtcctgacagat
ttgcatatttggagcattgaatatttgatacattattctctcacagattcatcaaaaact
cagtttaacaggcgattttgtgtatttatggataattgggagcgtgacaaaaaaattaat
tgtaaaaatttgattttatttgatgagactaaagaatatgttcattttaaaggaatggtc
gctattttaaaacgattaaatgttgagttacctaaagattgggataaaatagcagaaggc
ttagatttaaaaggtaatatgaaaattaagaaccatccattgtgtgtcaaaacaaaatct
tttggcagctgtaatttagatacttgctcatatagacatagagttatttcagaggttgat
actccaattctcaacatcaacataggagatgagctaaaaattcatattacacatattttt
agtgcttctcacttcgcagctcgcatacttgaatgcattactaagtgtaaatctactggc
aaaagacaaatcataccattatcatacaatatttttaaaatcaacaaagaattaaaaaag
tattacgattcacttgaaaataagagatctgttgaaaatgttgatattggccaattttac
ttatggaaagatcgctctaacaacttgattcgtcttcaagtactattgattgtagaaaaa
gtaccagaaacaaagaagccaaaatacatcagagctagaaatatagataatggaaaaata
attgaaaaaattagtgctcatgagcttgtggatatcccagagaatcttttaaaagaagaa
acaccaattatcgatatatttttgacttcaatttcacatcatgaagatgaaagtgattgg
acagatttggctaaagattacacaaaaagttggattaaaaacaatacaagtgaacaatta
tctctccatgcacaagttgaattacaaattggctatagcattttcaccaaaactttaata
cctcgtcaaaaagttaaaggttttcaagatttatctggggaatctttagcagctgctttg
ctgaaggaaaatcatgggatttctaataataaaaatttgcctaatcttttgaaattatgt
cagaaagcaggatttaaggacttaaattatggatcaacaaagccacattgtgattctgtt
gaagaaattgaaacctaa
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