KEGG   Trichogramma pretiosum: 106652520
Entry
106652520         CDS       T07644                                 
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
tpre  Trichogramma pretiosum
Pathway
tpre03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tpre00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106652520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpre03019]
    106652520
Messenger RNA biogenesis [BR:tpre03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     106652520
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 CSTF1_dimer WDR55 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_Aladin Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_DCAF4 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_EIPR1 Ge1_WD40 Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_IFT122_1st PEP5_VPS11_N Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_2nd Beta-prop_NWD2_C Beta-prop_WDR75_2nd Cytochrom_D1 Beta-prop_RSE1_2nd Beta-prop_LRRK2 Beta-prop_WDR11_1st VID27 Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 106652520
NCBI-ProteinID: XP_014227007
LinkDB
Position
Unknown
AA seq 433 aa
MKDSEVESKNIIKNRELLYRHMISQLFYDGHQAIAVQLSNLIQSEPPCPPSDRLLHLMLI
GMAHEPDRSKKENNHGSTFSAENTLGPGLDLEFETEATVQAPEPAQYETAYVTSHKGNCR
AGAFSADGQLIATGSVDASIKILDVDRMLAKSAPEEVPGDQTGGHPVIRTLYDHLEEVTC
LEFHPREPILVSGSRDFTVKLFDYSKASVKKAFRTITDADQIRCLSFHPTGDFLVVGTNH
PVIRLYDVNTAQCFVSSFPSHQHTGGITSLKYCSDAKIFASASKDGSIKLWDGISNKCIN
TFTKAHDGNQVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQ
AIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRMIVHSPVSPAFLTCSDD
FRARFWYRRMPNH
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgaaggactccgaagttgaatccaaaaatataataaaaaacagagagttactgtatagg
catatgataagccaattattttatgatgggcatcaggcgatagctgtacaactttcaaat
ctaattcagtccgaaccaccctgtccaccatcagatagattattgcatctgatgctgatt
ggaatggctcatgagccagacagatcaaaaaaagaaaacaatcatggatcaacgttttca
gcagagaacactcttggaccaggattagatttagaatttgaaacagaggcaacagtccaa
gccccagaaccagctcagtatgaaactgcctacgtgacatctcataaaggaaattgtcgt
gctggtgcattttctgcagatggtcaattaattgctactggctctgtagatgcatcaatt
aaaattctagatgttgacagaatgttagctaaatcagcacctgaagaagtacctggagat
caaactggtggacatcctgtaataagaactttatacgatcatttggaagaagtaacttgt
ttagagtttcatcctagagaacccattttagtatctggtagtagggattttacagtaaag
ttgttcgattactctaaagccagtgtaaaaaaagcatttcgaacaatcactgatgcagat
caaatcaggtgtttatcatttcatccaacaggtgattttctggttgttggtaccaaccac
ccagttataagactttacgatgtaaatactgctcagtgttttgtcagtagttttcctagt
catcagcacacaggtggaataacaagtttaaaatactgttctgatgctaaaatttttgca
tcagctagtaaagatggatcgattaaattatgggatggtatatcaaacaaatgtattaat
acatttaccaaagcacatgatggaaaccaagtttgttcagtgactttcactagaaatgga
aagtatcttttatcatcgggtaaagattctctcatcaaactttgggagttatctaccagc
agatgtttaatagcttacacgggtgctggaacaactggcaaacaagagcacaaagctcaa
gctattttcaatcatacagaggattatgttatgttccctgatgaagccacaacttctcta
tgtgcttggaactcaagaaatgcttcaagaaagcaattgttatcattgggtcataatggt
ccagtaagaatgattgttcattctccagtgagtccggcattcttaacatgttcggatgat
tttagagcaagattttggtatagacgaatgcctaatcattaa

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