Trichogramma pretiosum: 106652598
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Entry
106652598 CDS
T07644
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106652598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106652598
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
106652598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
106652598
NCBI-ProteinID:
XP_014227135
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MDVNMGDIDDFDWGNEKLQRAQKTVNETPYDLEAWALLIREAQNRPIAEVRPVFEKLIAV
FPSAGRYWKIYIEQEMKNRSYEKVEKLFQRCLIKILNIELWKLYLTYVKETKASLTTYKE
KMAQAYDFALDKIGMDIHSYSIWNDYIVFLKSVEAVGSYAENQRISAVRKVYQRGVVNPM
INMEQLWKDYMAFEQNINPIIAEKMAVERSRDYMNARRVAKELEAATRGLNRNAPSVPPT
GHPDEIKQVELWKKYISWEKGNPLRTEDTSLVARRVMFAIDQCLLCLGHHPAVWHQAAHF
LEQSSKILTEKGDVNGAKNLSDEAASMFERATNTLLSKNMLLYFAHADFEEGRIKYEKVH
QIYQKFLDMPDIDPTLAYVQYMKFARRAEGIKSARTVFKRAREDSRCKHHIYVAAALMEY
YCTKDKNIAFRIFELGLKKFGDNPDYILCYIDYLSHLNEDNNTRVLFERVLSSGSLEPEK
SVDIWNRFLEFESNIGDLASIVKVEKRRSAVLDKLKEFEGKETAQLVDRYKFLDLYPCTP
IELKSIGYMEVITTNRNGVCPAPRAADSEEIIAALPRPDISQMIPFKPKVNPLPGEHPVP
GGSFPLPPSAAQLCTILPPPDCFRGPFVAVDMLMDVFSRIQLPEHAPAPVADNGCDTKLF
DLAKSVHWIVDEVAEGNSLPNKRKRLRINGEESEEEDLPPPPANDIYRLRQQKRVK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcaacatgggcgacatcgacgatttcgactgggggaacgagaaattgcagcga
gctcaaaagacagtcaatgaaacaccatacgacttggaggcatgggctttattaatcaga
gaagcacagaatcgacccatagctgaagttaggcctgtttttgaaaaactcattgctgtt
tttccttcagctggtcgatactggaaaatttatattgaacaagagatgaagaaccgcagt
tatgaaaaagtagaaaagctattccagagatgtcttataaaaattttaaatatagaactg
tggaaactatatttaacatacgtgaaagaaactaaagcaagtttaacaacttataaagaa
aaaatggctcaagcttatgactttgctttagataaaattggaatggatatacattcatat
agtatttggaatgattatattgtatttcttaaaagtgtcgaagcagtaggttcatatgct
gaaaatcaaagaatcagcgcagtacgtaaagtttatcaacgtggtgttgtgaatccgatg
attaatatggagcaattatggaaagattacatggcatttgagcaaaatatcaatccaatt
atagcagaaaaaatggcggttgaaagatcaagagattacatgaatgcgagaagagtagct
aaagagttggaagcagccactagaggacttaacagaaatgctcctagtgtacctcctact
ggacaccctgatgaaattaaacaagttgaactatggaaaaaatatatttcttgggagaaa
ggcaatcctttgaggactgaagatacttcattggttgctcgtagagtcatgtttgcaata
gatcaatgtttactatgtctcggtcatcatccagccgtttggcatcaggctgctcacttt
cttgaacaaagctctaaaatacttaccgaaaaaggtgacgtaaatggcgcaaaaaatttg
agtgatgaagctgcatcaatgttcgaacgcgcaacaaatacccttttgtcaaaaaatatg
ttgttatactttgcacatgctgattttgaagaggggcgaataaaatatgaaaaagtgcat
caaatttaccaaaaatttcttgatatgcctgacatcgatccaaccttggcttatgttcaa
tatatgaaatttgctcggcgtgcagaaggtatcaaatcagccagaactgttttcaaaagg
gctcgtgaagactctcgatgcaaacaccatatctacgttgcagcagccttaatggaatat
tactgtactaaagataaaaacatagcctttcgcattttcgaattaggcttgaaaaaattt
ggtgataatcctgactacattctttgctacattgattatttatcacatttaaatgaggac
aataatactagagttttgttcgagagggttttgtcttctggaagtttggaaccagaaaaa
tcagtcgacatatggaatcgattcttagagtttgaatcaaacataggagacttagccagt
atagtaaaagttgaaaaacgaaggagtgcagttttagataagcttaaagaattcgagggc
aaagaaacggctcaattagtcgatcgttataaattcttggatttgtatccttgcacgcca
attgaattaaagtcaattgggtacatggaagtaataacgactaatagaaatggtgtttgc
ccagctccaagagcagctgattccgaagaaataattgctgctttgcctagaccagacata
tcacaaatgattccgttcaaaccaaaagtaaacccccttcctggtgaacaccctgttcca
ggtggatcttttccattgccaccatcagctgctcagctatgtactatactaccaccaccg
gactgttttagaggtccatttgtagctgtagatatgcttatggatgtattcagtcgtata
cagttacctgaacatgcccctgcaccggttgcagacaatggttgtgacaccaaattgttt
gatttggctaaatctgttcactggattgttgatgaagttgcagaaggaaatagtctccct
aataaacgaaagcgacttagaattaatggtgaagaaagtgaagaagaggatttacctcca
cctcccgcaaatgatatatacagattgaggcaacaaaaacgcgttaaatag
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