Trichogramma pretiosum: 106652778
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Entry
106652778 CDS
T07644
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03018
RNA degradation
tpre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106652778
09123 Folding, sorting and degradation
03018 RNA degradation
106652778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106652778
03041 Spliceosome [BR:
tpre03041
]
106652778
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106652778
mRNA degradation factors
5'-3' decay
Lsm complex
106652778
Spliceosome [BR:
tpre03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
106652778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LSM14
QRPTase_N
Motif
Other DBs
NCBI-GeneID:
106652778
NCBI-ProteinID:
XP_014227401
LinkDB
All DBs
Position
Unknown
AA seq
93 aa
AA seq
DB search
MSSTSSVNTNPSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLCGFDDFVNMLLEDVTECE
ITPEGRRITKLDQILLNGNNITMLVPGGDMPDT
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaccagcagtgtcaacacgaatccttcgacgttgctacctttagaacttgtg
gataaatgtatagggtctagaattcatataattatgaaaaatgataaggagattgtgggt
acactgtgcggttttgatgattttgttaatatgcttttggaagatgtaacagaatgtgaa
atcactccagaaggtagaagaattacgaagcttgatcaaattcttcttaacggaaataat
atcactatgctagtacctggaggagatatgccagatacataa
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integrated database retrieval system
