Trichogramma pretiosum: 106653011
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Entry
106653011 CDS
T07644
Name
(RefSeq) collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
tpre
Trichogramma pretiosum
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpre04147
]
106653011
00535 Proteoglycans [BR:
tpre00535
]
106653011
00536 Glycosaminoglycan binding proteins [BR:
tpre00536
]
106653011
Exosome [BR:
tpre04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106653011
Proteoglycans [BR:
tpre00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
106653011
Glycosaminoglycan binding proteins [BR:
tpre00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106653011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF1554
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
106653011
NCBI-ProteinID:
XP_023316398
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MLALILIVLLSCRGISTASTQDFFGDKKETHFDLLEAAVSLIDDKSLYISDGYDGFPAFG
FRPSSEVKQPYRMYLPEKLSAEFTIVAMFKIQSARNSYLFSVLNPFETVVQLGIRISEGP
SSNQNISLVYTNSDMHSFSDEVAKFTVPKLVRKWSKIVIRVTMTEVVLYLNCNEVGRQRV
TRIPPELVFDTASTLYIAQGGPHIQEKYDGLVQTLKLHIGYPQDLVKCNEDFNYFSGDGS
GDEDVDLFSDLEEISPYGVPIVRGNEDSIEEAKPATPATTPAPIPNPSYQVKGEKGDKGE
KGEGVRGPPGPPGRSYDLNDEDLITRLPKGPPGPKGDPGDCGCNASAVMNSFIMPQMLVG
EKGEPGPPGKEGRPGPLGLTGSAGPPGERGQFGPPGPKGDKGDLGPRGLEGAQGAKGEPG
RDGVAGEKGAQGPPGPPGKGDFSSFDPSWKPRAIYRTDGYTMRPGLPGQKGDDGKPGHPG
PKGEPGVHGAKGIKGDMGHKGSKGDHGKEGSRGYQGIKGEPGAPGTPGLPGASGETGRTG
DKGAKGDIGPEGKPGPAGPPGPASIGGGTFVNGDSALRVIKGEPGERGYKGDMGFKGEKG
DQGETGASGIPGVNGVQGPQGNKGEPGKDGTPGFPGTPGSKGERGERGPPGVTAIAGSGD
YVTIKGEKGAEGKRGRRGRPGPPGPEGPPGKPGTFSEMALPTWLNNLKGRSAAAGIPGNP
GPKGEKGEPANFYGSGFSAKGEKGDKGDVGYPGIPGAPGRDGHRGPPGPPGPAIQGTYIP
VPGPPGPPGPPGPPHSGGGGGAGKSHIYGERDYYGSRQGLRSSLDELKALRELKELKLKE
HLGSNSAASKNSYEPTTKIVPGAVTFQNAEAMIKMSAVSPVGTLAYIIDEQALLVRVNNG
WQYIPLGTLLPITTPAPSTSVSPSVVPPFESSNLINQSPIKTDNGGAWYPKMLRMAALNE
PFTGDLHGIRGADYSCYRQSRRAGLRGTFRAFLSSRVQNVDSIVRISDRDLPIVNIKGDV
LFKSWKDMFSGRGAYFSPNSRIYSFNGKNVITDYTWPDKVVWHGSHAEGERAMDTYCDAW
HSSSADRYGLGSPLTSGQILEQRRYPCDNTLALLCIEVASEPTTKRRKRSTPNEFDFAEE
EKDGASNSDDNDDEDVLSEDEYAQHLDFIGLR
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgttaattctgatcgtcctactgagttgccgtgggatttcgaccgcatccacg
caggactttttcggcgataaaaaagagacccacttcgatttgctggaggcggcggtctcg
ctgatagacgacaagagcctctacataagcgacggctacgacggcttcccggcgttcgga
tttcggccgtcgtccgaggtcaagcagccctatcgcatgtacctgccggagaagctcagc
gccgagttcaccatcgtggccatgttcaagatccagtcggccaggaacagctatctcttc
tccgtgctcaatccgttcgagacggtcgttcagcttggcattcggatttcggagggcccg
tcgtccaatcaaaacatatcgctcgtctacaccaactccgacatgcactcgttctccgac
gaggtggccaagttcaccgtgcccaagctcgtgaggaagtggtccaagatcgtgatacgc
gtcaccatgaccgaggtcgttctctacctgaactgcaacgaggtcggccgccagcgggtc
acgcggataccgcccgagctcgtcttcgacacggccagcacgctctacatcgcccaaggt
ggtccgcacatacaggagaaatacgacggcttggtgcaaacgttaaaattacacattgga
tatcctcaagatctcgtcaagtgcaatgaagactttaactatttctcgggagatggttca
ggagatgaagacgtcgacttatttagtgacttagaagaaatcagtccctacggagtaccc
atcgtccgaggcaacgaagacagcatcgaggaagcgaaaccagcgactcctgccacgacc
ccggcgccgattccaaatccctcttatcaggtgaaaggagaaaagggtgacaaaggagag
aagggcgaaggcgtgagaggacctccgggaccgcctggcagaagctatgatctcaacgat
gaggatttgataacgagactgccgaaaggaccgcccggacctaaaggcgatcccggcgat
tgcggatgcaacgccagcgcggttatgaattcgttcatcatgccgcagatgctggtgggc
gagaaaggcgagcccggaccaccgggcaaggaaggccgacctggaccactcgggttaacg
ggctcggcaggtccaccgggcgagcgtggccagttcgggccacccggaccgaagggcgac
aaaggcgacttgggtccccgaggtctggagggcgcgcaaggcgccaagggcgagcccggc
cgcgacggcgtagccggagaaaaaggagctcaaggtccgccaggaccgcctggcaaaggc
gacttctccagcttcgaccccagttggaagccccgagctatctataggaccgacggttac
acaatgagacctggcctgcccggacaaaaaggcgacgatggaaaacccggtcatcccggc
ccgaagggcgaaccgggagtgcacggagcaaagggtatcaaaggcgacatgggtcacaaa
ggctcgaaaggcgatcacggcaaggagggctctcgaggctaccaaggcatcaaaggcgag
cccggggcgccgggcacgccgggactgccgggtgccagcggagagaccggccgtacaggg
gacaaaggtgccaaaggtgatatcgggccggagggaaaacccggacccgctggaccgccg
ggcccggcgagcatcggtggcggtactttcgtcaatggcgattcggctctgagagttata
aagggcgagcccggtgaacgaggttataaaggggacatgggtttcaaaggcgaaaaaggt
gatcaaggtgaaacgggggcgtcgggcataccaggcgtaaacggagttcaagggccgcaa
ggaaataaaggagagcctggtaaggacggcacacccggatttccgggaacgcccggttcg
aagggcgagcgaggcgagcgaggcccgcccggagtgaccgcgatcgcaggctcgggcgat
tacgtgaccattaagggtgaaaaaggagccgaaggtaaacgcggccgcagaggtaggcca
ggaccaccaggaccggaaggcccgccaggaaagcccggaacgttttccgaaatggccctt
cctacttggctcaataatttgaagggccgatcagcagcagccggcattccaggcaatcct
gggccaaagggtgaaaaaggtgaacccgctaatttttacggttcaggatttagcgccaaa
ggcgaaaaaggggacaaaggcgacgtcggttatcccggcatacccggtgcacccggccga
gacggccatcgagggccacccggaccccctggaccggccatacaaggaacttacatacca
gttcccggtcctccaggtccgccgggaccaccgggtcccccgcactcgggaggaggcggg
ggagctggcaaaagccatatttatggcgagcgtgactattacggctctcgacagggatta
aggagcagcttggacgaacttaaagctttgcgagagttgaaagagcttaaactaaaagaa
catttaggatctaactcagctgcatcgaagaattcttacgagccgaccacgaaaatcgtt
cccggggccgtaactttccaaaacgccgaagccatgataaagatgtccgccgtgagtccc
gttggtacactggcctacatcatagacgagcaagcgctactggtccgtgtaaacaacggt
tggcagtacattccgctcggaacacttttgccgataacgacacctgctccctcgacgagc
gtatcgccctccgtcgttccgcctttcgagtcgtccaatttgatcaatcaatcccccatt
aaaacggataacggtggcgcctggtatcccaaaatgttgaggatggccgccctgaacgag
ccgttcaccggtgacttgcacggcatacggggcgctgattactcgtgctatcgacaatcg
agacgtgccggattaaggggcacttttcgagcttttctcagctcgcgcgtccaaaacgtc
gacagcattgtcaggataagcgatcgtgatttgcccatcgtgaatatcaagggcgacgtc
ctattcaagtcgtggaaggacatgttcagcggtcgcggggcatacttctcacccaattcg
agaatctacagctttaatggaaagaacgtcatcacggattacacgtggccggacaaagtc
gtttggcacggctcgcatgcagagggcgagcgggccatggatacgtactgcgacgcatgg
cattcgtcgagcgccgacagatacggcctgggctcgccgctgaccagcggccaaattctc
gagcagcgtcgctatccgtgcgacaatacgctcgccctgctctgcatcgaggtggccagc
gagccgaccaccaaacgtcgaaagcgctccacgcccaacgagttcgactttgccgaggag
gaaaaagacggcgcctcgaacagcgacgacaacgacgacgaggacgtgctcagcgaggac
gaatacgctcagcacttggactttatcgggttgcgttaa
DBGET
integrated database retrieval system
