Trichogramma pretiosum: 106653065
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Entry
106653065 CDS
T07644
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106653065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpre03021
]
106653065
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106653065
Transcription machinery [BR:
tpre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106653065
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106653065
U7-dependent histone pre-mRNA processing factors
106653065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_3
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
106653065
NCBI-ProteinID:
XP_014227785
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MQSNMSTKRKQVEGMVPSEENDLLTIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLS
GMDALPFVDIVEADEIDLLLISHFHLDHSGALPWFLLKTSFKGRCFMTHATKAIYRWLLS
DYIKVSNIATEQMLYTEADLEASMDKIETLNFHEEKDVFGIKFWAYNAGHVLGAAMFMIE
IAGVKILYTGDFSRQEDRHLMAAEIPNVRPDVLITEATYGTHIHEKREDREGRFTTLVHE
IVNRGGRCLIPVFALGRAQELLLILDEYWSQHPELHEIPIYYASSLAKKCMAVYQTFINA
MNDKIRRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFELWCTDH
KNGVIIAGYCVEGTLAKTILSEPEEITTMGGQKLPLKMSVDYISFSAHTDYQQTSEFIRV
LKPLHVILVHGEQNEMGRLKAALQREYEDDPDTVMEIHNPRNTVAVELYFSGEKTAKVMG
TLAMTTPKPGQKLSGVLVKRNFNYHLLDPCDLNRYSEMSISQVVQRQSVYYSAPLPTLKH
LLTQIAGTLETIDDKKLRVFKNVDLTIEGKIITMEWLATPVNDMYADAVLTALLQAESME
NNPKMLTAPTKMDKMHFKECLIEMLQEMFGEDSVPKIFKGDKLYVTVDKKKAHIDLMTLE
VSCPEDDTFQQIVHTAVSKLYQSLSPPID
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcaacatgtcaaccaaaagaaaacaggttgaaggaatggttccatctgaagaa
aatgatttgcttaccatcagacccttaggtgctggacaagaagtaggacgttcttgtata
atgttggagtttaaaggaaaaaagattatgcttgattgtggtattcacccaggactcagt
ggcatggatgcccttccatttgttgatattgttgaagctgacgaaatagatttattattg
atttctcattttcatcttgaccacagtggtgctttaccctggtttttactaaaaaccagc
ttcaaaggcagatgtttcatgacacatgctacaaaagcaatttatcggtggttattatct
gattatatcaaagtcagtaatatcgcaactgagcaaatgctttatacagaagcagattta
gaagctagtatggataaaattgagacgttaaactttcatgaagaaaaagatgtatttggt
atcaaattttgggcttataatgctggacatgttcttggtgcagctatgtttatgattgag
attgctggggttaaaattctatacactggtgactttagcaggcaagaggatagacattta
atggcagctgaaattccaaatgtgcgcccagatgtacttataactgaagcaacatatggt
acacatattcatgaaaaacgtgaagatcgcgagggacgctttacaactcttgttcatgag
attgttaatcgtggtggacgctgccttattcctgtatttgctttgggtcgagcccaagaa
ctcctacttattcttgatgaatattggtctcaacatccagaactccatgaaattccaatt
tactatgcatcatctttagctaaaaaatgtatggctgtataccaaacttttatcaatgcc
atgaatgacaaaatacgcagacaaatagctatcaacaatccttttgtatttaaacatatc
tctaatctaaaaggcatcgatcattttgaagatattggaccatgtgttgtaatggcttca
ccaggtatgatgcaaagtggattgtccagagaactgtttgaattatggtgtacagatcac
aaaaatggggtaataatagcgggttattgtgtagaaggaactctggctaaaactatttta
tcagaaccagaagaaattacaacaatgggtggacaaaaattaccattgaaaatgtctgtt
gattatatttcattttcagcccatacagattatcagcagacttcagagttcataagagtt
ttgaaacctcttcatgttatcctagtccatggtgaacaaaatgaaatgggcagactcaaa
gctgctctgcagcgtgagtatgaagatgacccagatacagttatggaaattcataatcca
agaaatacagttgctgttgaactttattttagtggtgaaaaaacagccaaagtgatgggt
acattagccatgactaccccaaaaccaggacaaaaactctctggtgttttggtcaaaaga
aactttaattatcacctactggatccttgcgaccttaatagatacagtgaaatgagtata
agtcaagttgttcaacgtcaaagcgtatattactctgcaccattaccgaccttgaagcat
ttgttgacgcaaatagctggtacccttgaaactatagatgacaaaaaattacgcgttttc
aaaaatgtcgatctcaccatcgagggtaaaattatcacgatggaatggctggcgacacca
gtgaacgacatgtatgctgacgccgttctcaccgctctattgcaagctgaatccatggaa
aataatccgaaaatgcttactgcaccaactaaaatggataaaatgcattttaaagaatgc
cttatagaaatgctacaagagatgtttggtgaagactctgtgccaaagatatttaaaggt
gacaaattatacgttacagtagataaaaagaaagcacacatcgaccttatgacactagaa
gtttcgtgtccggaagacgatacattccaacaaattgtacatacagctgtatcgaagtta
tatcagtcgttgtcaccaccaatcgattga
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