Trichogramma pretiosum: 106653100
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Entry
106653100 CDS
T07644
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03022
Basal transcription factors
tpre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106653100
09124 Replication and repair
03420 Nucleotide excision repair
106653100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpre03021
]
106653100
03400 DNA repair and recombination proteins [BR:
tpre03400
]
106653100
Transcription machinery [BR:
tpre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106653100
DNA repair and recombination proteins [BR:
tpre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106653100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
106653100
NCBI-ProteinID:
XP_014227839
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MASAMGGRSLLQPKVLQCKDLHEYLKTRTPEMLSKLYDNPPICLAVYRELPELARNYVVR
LLFVEQPVPQAVVASWCSKLHVEDHMKVVTVMSDLSIWKEVAIPGGLPGWVLNSTFRKNL
KIVLLGGGQPWTMSNQLDADSKPRDIAYLDSYALERWECVLHYMVGSQQQEGISIDAVRV
LLQAGLMVRDEDENVPTITQAGFQFLLLDTAAQVWYFILQYLDTVEAKGLDLVECLSFLF
QLNFSTLGKDYSTEGMSDGLLTFLQHLREFGLVYQRKRKAGRFYPTRLALNIATGQNKPL
AHDLEKDRYIIVETNYRINAYTDSNLQVALIGLFTSLVYRFPNLVVGVLTRDSVRQAFKI
GITAEQIIGYLKQHAHPNMIAGGPPILPPTIVDQIKLWENERNRFSFTDGVLYNSFLSQT
DFEVLRDYAQSVSALTWHSDKKRAMVITREGHDDVKKYWKRYSKNAN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgcaatgggtggaagaagtttgcttcaaccgaaggtgcttcagtgtaaagat
ttacatgagtacctgaaaacaagaacacctgaaatgctcagtaaactctacgacaatcct
ccaatttgtttagcagtatacagagaattaccagaattagcccgtaattatgttgttaga
ttattatttgttgaacagccagtgcctcaagctgtcgttgcttcttggtgttcaaaatta
catgtagaagatcacatgaaagttgtgactgtgatgagtgatttgagcatttggaaagaa
gtcgcaattcctggaggacttcctggatgggtgttaaattctacatttaggaaaaattta
aaaatcgttttgcttggcggtggacaaccatggaccatgtctaatcagctcgatgctgat
agtaaaccaagagatattgcttatttggatagctatgcgctggaaagatgggagtgcgtt
ctacattatatggttggctcacaacaacaagagggtatatcaatagatgccgtaagagtc
ttattacaagctggtttaatggtcagagatgaggacgaaaatgttccaaccataacacaa
gctggttttcagtttttattacttgataccgcagcacaagtttggtacttcattctacaa
tacttggatacagttgaggccaaagggcttgatttagtagaatgtttgagctttctattt
caattaaatttttccactttgggtaaggattacagtactgaaggcatgtctgatggactg
ctaacatttcttcaacatttaagagagtttggactagtttatcaaagaaaacgcaaagct
ggaagattttatccaacaagattagcattaaatattgccactggccaaaataaaccatta
gcacatgatttagaaaaagatagatatatcatagttgaaactaattacagaataaatgct
tatactgactcaaatttgcaagtggctctaataggattatttacctctttagtatataga
tttccaaatttagtagtaggtgtattgacaagagattctgtgagacaagcttttaaaatt
ggcataactgctgaacaaatcattggttacctgaagcaacatgctcatcctaacatgatt
gcgggtggacctcctattttaccaccaacaatagtggatcaaataaaattatgggaaaat
gaaagaaatagattttcattcacggatggagttttgtacaattcttttctttctcaaaca
gactttgaagttctcagagattatgctcaatctgtgtcagcattaacatggcatagtgat
aaaaaaagagctatggttataacccgggaaggtcacgatgatgttaaaaagtattggaaa
agatattccaaaaatgcaaattaa
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integrated database retrieval system
