Trichogramma pretiosum: 106653271
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Entry
106653271 CDS
T07644
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03013
Nucleocytoplasmic transport
tpre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106653271
03015 mRNA surveillance pathway
106653271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106653271
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106653271
mRNA cycle factors
P-body specific factors
106653271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
106653271
NCBI-ProteinID:
XP_014228157
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MAESINSESLETVSASGDVSDEDKKILSDYVKEAEARLANKEEMRASNTNFTRPPDSYFS
KLDSNLKKNTTFVKKLKTFAASQLDNVMKDVTTLNLTKYISEVASALVEAKLKMTDIPSV
LKICSYLHQKYADFSNHFFENWQKTLIFKNGDKIANPSKLRVDLRLYSELVASGIFTPKQ
GLPLLGSVLTFLINMDKEEHNNTNIILSFCKHCGEDYAGLVSKKIRELSEKMNVPLPTSN
FLPTEKKQNVKTLLRDYYNSLCKHLYKDHKALQAFEKQNRKILQTRGELSSERKEKLEAF
QISYDRLLNNAQLFSEILDEPMPELPVEIEAKTESENGVKKLSESSDSSILEDLWGDEET
CRFYESLTDLTVFLPGSYKKVSPKKEVQSTEQEKQSLEINDDQEEDLTVLSPEELDKLEA
EAMEREVEVEDTEEAQTQNVSNKILLDAFLNHLPNCVNREMIDNAAVDFVMTLNTKNNKK
KLIKTLFGVSRIRLDLLPFYSRLAAILYPVMPEVGNDLCQMLKQDFKYHVHKKDQINIES
KIKVVRYIGELVKFKLYSKAEALYCLKVLLYDFTHHHVDMACNLLETCGKFLFCSPDSHH
RTKVYLEQMMRKRQVTSLDPRYVTLIENAYYSINPPESVTIVKKERPPLHEFIRKLLYQD
LGRNTIDKVLQLMIKLDWHNKEVSDYAIRCFIAAHNVKYLNIRQVAYVLQGLASICDWIA
PPVIDGVLEDIRINLEINQIKFNQRRIAMIKFLGELFNYRLIDHDDLFQVFYLLITFASS
TDLSVICPLDPPDNLFRIRLVCTLMDTCASYIDSGSGKKKLDYYLVFFQHYYWSKFASFV
WTTENPFPWSITSIYQDAIRKVRPNLTLYQSYQESLEAVIEVQKALFPNLAEMQEKKENV
NDLEAIPEEDLDILPENEDVKSQPSEENSEETNEVTATQSTRDNTENNTPNNTQGQISPD
DSDPSAPIDNSENEVALPVAPKLVSCQEDEDFLSALDKMVSDNIQDRMRETSKPQQVDIS
VPLNVKNTKKTYEQLQDTTTADTSTVDFVLMVRKGNKPQYKNVAVPVNSELAKNLKNREQ
ELKEEKEKVKRLTLNITERQEEEDYQEAISQGTRPVTANLNRERRPKYNHPKGAPDADLI
FGPKKIR
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtcaatcaacagtgagagtttagaaacagtgagtgcgagtggtgacgttagc
gatgaagacaaaaaaattttaagtgattatgtgaaagaggcagaagctagactagccaac
aaagaagaaatgcgtgcatctaatactaattttacgagaccgccggactcttattttagt
aagcttgactcgaatttgaaaaaaaataccacttttgttaaaaagctcaagacttttgca
gcgagtcagttagataatgtgatgaaggatgtgaccactttgaacttgacaaaatacatc
agtgaagttgcttcagcgttggtagaggcaaaactgaagatgacagatataccatcagtt
ctcaaaatatgcagttatttacatcagaaatacgcagatttttcaaatcatttttttgaa
aattggcaaaagaccttaattttcaaaaatggagataaaatagctaatcccagtaaactc
agagtggatttgagactttattcagagctcgtagcttcaggtatatttacgccaaaacaa
ggactcccattactgggatctgttcttacttttttaataaacatggacaaagaggaacac
aataatactaatattatattaagcttttgtaaacattgtggggaagattatgctggttta
gtttcaaaaaaaatcagagaattatctgaaaaaatgaatgtgccgttgcctacaagcaat
tttttacccacagaaaagaagcaaaatgtcaaaactttacttcgtgattactacaattct
ttgtgtaaacatctttacaaggatcataaagcactacaagcatttgaaaagcaaaatcga
aaaattttacaaaccagaggtgaactaagttcagaaaggaaagaaaaacttgaagctttt
caaatttcctatgatcgtcttttaaataatgctcaacttttctctgaaattcttgatgaa
ccaatgccagaacttccagttgaaatagaagctaaaactgaatcagaaaatggtgtgaaa
aaactcagcgaaagttcagatagtagcatcttagaagatttgtggggagatgaagaaact
tgtcgtttttatgagagccttacagatcttacagtctttctacctggctcttataagaaa
gtatctcctaaaaaagaagtgcaaagcacagaacaagaaaaacagtcattagaaataaat
gatgatcaagaagaagatttgactgtgttatctccagaggaattggataaattagaggca
gaagcaatggagagagaagtagaagtggaagacacagaagaagctcaaactcagaatgtt
agtaacaagattttactggatgcttttctaaatcacttaccaaattgtgtcaacagagaa
atgattgacaatgccgcagttgactttgtaatgactctcaatactaaaaataacaagaag
aaacttataaaaaccctttttggagtttcgcgaattcgacttgatcttttgccattttat
tcacgtctagctgcaattttgtatccagtaatgcctgaagtaggaaatgatttatgccaa
atgctcaagcaagattttaaatatcatgttcataaaaaagatcagattaatatagaatct
aaaatcaaagttgtcagatatattggtgaacttgttaaatttaagctttattctaaagca
gaagctctttattgcttaaaagttttattatatgactttacacatcatcatgttgacatg
gcttgcaatcttctggagacttgtggcaaatttttattttgttcaccagattctcatcat
cgaaccaaagtgtatttagagcaaatgatgagaaagagacaagtaacatctctagatcca
agatatgttaccctcattgaaaatgcttattactctatcaatccacctgaatctgtaact
atagtaaaaaaagaacgtccacctttacatgaattcattcgtaaacttttatatcaagat
ttgggaagaaatactatagataaagtgttacagttaatgattaaacttgattggcataac
aaagaagtatctgattatgctatacgatgttttattgctgctcacaatgtgaagtatttg
aatatacgtcaagttgcatatgtcttgcaaggactagcttctatctgtgattggatagca
cctcctgttattgatggagttctagaagatataagaattaatttagaaataaatcaaata
aagttcaatcaacgacgtatagctatgataaaatttttaggtgaattgttcaactatcgt
ttaattgatcacgatgatttatttcaagtattttatttgctaattacttttgcaagtagc
acggatctttctgtgatatgccctcttgatccaccagataacttgtttcgaataagatta
gtctgtacattaatggatacttgtgcatcatatattgatagtggttcaggcaaaaagaaa
ttagattattatctggttttttttcaacattattattggtctaaatttgcaagctttgta
tggacaacggaaaacccgtttccttggagcatcacatccatttatcaggatgcaataaga
aaagttagaccaaatctgacgttataccaaagctatcaagaatctcttgaagctgtcatt
gaagttcaaaaagcactatttccaaatttagccgagatgcaagaaaaaaaagaaaatgtt
aatgatttggaggctataccagaagaagatttggatattttacctgaaaacgaagatgta
aaatctcaaccatcagaagaaaattctgaagaaacaaatgaagttaccgcaactcaaagt
actcgagacaatactgaaaataatactccgaataacacccaaggacaaatttcaccagat
gattctgatcctagtgctccaattgataactctgaaaatgaggtagctttaccagtagca
cctaaactagtatcttgccaagaagacgaagattttctctcagctttggataaaatggta
tctgataatatacaagacagaatgcgcgaaacttccaagcctcaacaagttgacatatca
gttcctttaaatgtaaaaaacaccaaaaaaacttatgaacaattgcaagacactactact
gctgatacttcaactgttgactttgtattgatggttcgtaagggtaataaaccacaatat
aaaaatgttgctgtaccagtgaattcagaattggctaaaaatctcaaaaatagagaacaa
gaacttaaagaagaaaaagaaaaagtcaaaagattaactcttaatatcactgaaaggcaa
gaagaagaagactaccaagaagcaattagtcaaggaactaggccagtcactgcaaattta
aacagagaaagaaggcctaaatataatcaccccaaaggagcaccagatgcagatttaatt
tttggacctaaaaaaattagatag
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