Trichogramma pretiosum: 106653287
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Entry
106653287 CDS
T07644
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
tpre
Trichogramma pretiosum
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpre03009
]
106653287
Ribosome biogenesis [BR:
tpre03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106653287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
106653287
NCBI-ProteinID:
XP_014228174
LinkDB
All DBs
Position
Unknown
AA seq
2687 aa
AA seq
DB search
MPKVEVDTAHRFVPFSKRVHDIDVNIFHKVKHRNEEVPDKVESYFYQQVQEENFLNLAEN
YLNFRKEVSHIVTLPQLLVCKEHVINTLLKYLKLKDPLCLESIFRILLAVAKDLEDEFYP
YFPDFLAAIIDLLNVKDADQLEYTFRTLAYLFKYQWRYMIKNIDKIFYLLVPLLAESYPA
YINNFAAEGFAFVVRKVKDKPAFLQLVIEALEEQQNKVVGCGKLFYHVLVGTPGHFHSCA
ETMLSIYFDALENTPSHQQLHFQVLTTVFNCITKEIHFQKSEVLWTVILKYLDKFEGNNL
KLLLKLIKIIIKNKEEMVKDPAAWALKLGQLIQKYQNNNELIAEIVDVSIDTLLAIKKLQ
QESSSFLVIKLLSIEDQNCLIKITRDLIPYSSFETMVLPRVLKKSQFSILNNDLLDLFVN
IIMFKSPPKLGGIEFEKWNKFNLNIQGKENYTYLANILNTFEEISSVNEDFLKVLYIIPH
LSTLSDEIYNAVTKSLMNLYKRIQQKENSTDGNNFAFLLAMESVLRIASSDKLFDLIQNL
PNLLDTLCFYQNDTAVLKSLDMLLSYMKNSSCENEYINLSVFDHIHQALVSKLGSSNSLI
RLTVSHIFSLFASIPTMKPPTSEENLSKSALELPYLAECQPVTVHQYRQRLVYSQSLNSN
SASVIHLEAKYQDIPIHHCFGSLYLNFRLIWDPMCQIITSYANPDCKVFWPIFISKLRSI
NAEKDEVDKVCKPSYGNEILNDTVSKVYTSDKIDLENVRYLLWKCMGMMTTYIEPKNRDY
VDIFIDFVEKNFYRAYSEEAKSCSIRIYKTDESNKKLSDKKSFDDETSTESTRRERVQLL
VTMLQVFGKFTNTRSLSREPEICSIYHHFLTSKDLEIQKAALNCIYTYKHKYIVPYQIQL
DNIVNEQNLKNELVRFQISVEQSEIQEEHREGLMPILMRILHTKMSQRVGMRTGGKAGGL
VKRKTILRFLAGIKEEEMMVFIRMAFKPFENYLPILKVEKESQNDVKLCAMIRELIPNVD
LDNVIPPKRLQSAMNLISTMIEQFGGKMTKHVLPHLLSILVCILAQTVGILDLVNDVHPD
FLKMIKNVRNTGINVLARFFQHFEYYDWTSDEIDAVFETAVFPWLNKLPIEGIHSPTPLL
KMFDIWSKNPRYYPLFVKLNKNNQTPINFVIELLSNEKTEKSVLRMIMEIIEKLLTTLDF
EKEDPEAMDVDDTIKAKSLFDVVTGKVEIVRDDTINYGSAMLLPHVSKILAFLVKKLREQ
KKHGANRTELTVLSSITEFATDPETSDTLLTLTLPILTKKSGDSEDVVMGFLTAVANLMK
RVNNPAIYLRPVQQLLALLTTPQARKLLMQVLEEVARNNEDLQNNHRLLVELNAYDRRWI
EQADYDRRLNAFQQIDSLIREEKVTVDFGVSIILNCYYFLKTENEQSMEDRASECLKYIS
VYLCKKFNAVPSDRRYLVEDTILNLIRNGIKDKRDKVKLQSIAYLGHMAMECPDVHVVLR
DLHALTNKVDPEVDFFNNIGHIQRHRHGRALLKFCSVAKTLTRAPNPRTLSQFILPLASY
YLCNEKYANKDGHNTITAAIDTVGTVCRLLPWNQYEFVLKYYLFKLRNNMEHQKQVIRIV
VAILDAFHFDLSKYKEVNEAVEDNNENDDDESVEDDSKFENVENETEDVPNVEDVDESAE
NENAEENENAEPDTEEVPIVQEIPIVERQTVLSQYMARRLVQSISTVLLPQLHRSITVRA
RLDGAHKVNKKIVRDDQEERDLQRVPIALAMVKLLQKLPSNILDTNVRGIFMKVCTFLKS
RLESVRRDTRKILEEIMITLGPDYLHHLLVEMNSLLTRGFQVHVLAVTVHAVLIKLEPSL
EPKHIKANMALLHSVCKIDLFGPSAEEKEISGIIKNTSEAKATKSYDIYKIMGQFTGADS
LVPLIQPLRDVLRTNSSKTIRKATTSLQEIGKGLARNTFIPLTNLLSFLQGVVNETIPEI
MPDSKRKKNNEDKQAKSKFLTDEDRTLSLIIQPPPKTRMGIKTKSKISEDTNANVIMEFG
LRILSLLLKQNKLNDQDSKKQLDGFVPFLSRCLESQHVELSTLALRCLCHVVATDLPNVR
KFSTEICESMFKILHKYAVSGLGKGVNFDLVMTAFKAMSILVKDAKHFKLTPEQLKILLQ
YVEKDIHDHERRATGFDLLKAIIKRKLIVPQMHEVMEEVSKLIVTSKSEDVRKRARNACY
TYLMDYPVDKENLESRINFFFRNLEFSEAFGRMSVITMAYEIITTFPQQKLEEFAEELFC
LLAPRLVNEEDQTCQKNVAKCIRELINRISHNLKSKLFNFTCLWMEEEKLRFRRLAVQVC
GMFVQTEKNDFSSRLDRLLPLLMKQFNKNLDEIDENAPGRFVKQVKSIFVKDRKVKSMKS
LRDHHFILVFELILKICKNCPNFLGKGANEKNKYQKYVDILRDCCHSHLVHPHLWVRERA
SQVLGFVLHAVDVKKWSAEKLRSLILDNVDQLDPGVDHEEFFDQIIKNLLYLAKFVEIEN
TEESEKKMSLHWLIKSLRKKINLEITQAPQSIVVRKAVFHWIAGVTVNIDIEKLKPMLPQ
LVSPLVREMSTTEVENAPLRQLAKEVSTMFKKLLDVDEYTRLFNAASQHLEVKRAEKKAE
RSRQFVTNPEIANKRKLKRQEKKRKRKSDVKRRSKPKKMRMNDDEDN
NT seq
8064 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagtggaagtagatacggcccatcggttcgtaccgttctccaaaagggtccat
gacatagatgtcaatatttttcataaagtcaagcatcgcaatgaagaggttcctgataag
gttgaatcatatttctaccagcaagtccaagaggaaaactttctcaatcttgctgaaaat
tatttgaattttcgtaaagaagtttcgcacatagttactcttccacaacttcttgtttgt
aaagaacacgttataaatactttattgaagtatttaaagttaaaagatccattgtgtttg
gaaagtatttttagaatactacttgctgttgctaaagatttagaagacgagttttatcca
tactttccagattttttggcagcgattatagatttattaaatgtcaaagatgctgatcag
ctcgaatatacttttagaactcttgcatatctctttaaataccaatggcgttacatgatc
aaaaatattgacaaaatcttctatttactggttcctttactggcagaatcatacccagct
tatatcaacaattttgctgctgaaggttttgcttttgtagtaagaaaagttaaagataaa
cctgcatttcttcaattagttattgaagctctagaagaacaacaaaataaagttgttgga
tgtggaaaattattttatcatgttttagtaggtactcctggacattttcactcatgtgcc
gaaaccatgttaagtatttattttgatgcccttgaaaatacaccttcacatcaacaatta
catttccaagtacttacaactgttttcaactgcatcacaaaagaaattcatttccaaaaa
agtgaagtgttatggacagttattttaaagtatctggataaatttgaaggaaataatttg
aaattattactaaaactcattaaaatcattattaaaaataaagaagaaatggttaaagat
ccagcagcatgggcattaaaattaggacaactcattcagaagtatcaaaataataatgaa
ttaattgctgaaatagttgatgtgtcaattgacacactcttagccataaaaaaattacaa
caagaaagttctagtttcttggtaataaagctgttatccattgaagatcaaaattgtttg
ataaaaattactcgtgacttgattccatattcatcttttgagacaatggttttaccaaga
gttttgaagaaaagtcaattttcaattttgaacaatgatttattggatctttttgtgaat
ataattatgttcaaatctccaccaaaacttggtgggattgaatttgaaaagtggaataag
ttcaatcttaatattcagggcaaagaaaattatacttatctagctaatattttgaatact
tttgaagagattagttcagttaatgaagatttcttaaaagttttatatattattccacat
ctgtctactttatcagatgaaatatataatgcagttacaaagagcttgatgaatttatac
aaaagaattcaacagaaagaaaatagtacagatggaaataattttgcatttctacttgcc
atggagtctgtattgcgaatagcgagttcggataaattattcgatttaatccaaaatctt
ccgaaccttttagatacattgtgtttttatcaaaatgatacagcagttttgaaatcttta
gatatgctattgagttatatgaaaaattctagttgtgaaaatgaatatattaatctgtcc
gtatttgatcacattcatcaagctttagtttcaaaattaggatcatcaaattcattaata
cgtctaactgtgtcacatattttttcactgtttgcttcaattccaacaatgaagcctcct
acttctgaagaaaatctatcaaaatcagctttggaattaccttacttagctgaatgtcaa
ccagttacagtccaccaatatcgccaacgtcttgtatactctcagtctcttaattctaac
agtgcttcagttattcaccttgaagctaaatatcaagatatccctatacaccattgtttt
ggcagtctgtatttgaacttccgtcttatttgggatccaatgtgtcagataataacatca
tatgccaacccagattgcaaagtattttggccaatttttatttctaaattaagaagtata
aatgctgagaaagatgaagtagataaagtttgcaaaccaagttatggaaatgaaatatta
aatgatactgttagcaaagtttacacaagtgataaaattgacctagagaatgttcgatat
ctgttatggaagtgtatgggtatgatgaccacgtacatagaaccaaaaaatcgagattat
gttgatatttttatagattttgttgaaaaaaacttttatcgtgcatactcagaggaagca
aaatcttgttccattagaatttataaaacagatgaatctaacaaaaaattgtctgataaa
aagagctttgatgatgaaacatctacagaatcaactcgtcgtgaacgagtccaacttctt
gttacaatgcttcaagtttttggcaaatttacaaatactcgatcgctgtcacgtgaaccg
gaaatttgtagcatttaccaccattttctaacttccaaagacttggaaattcaaaaagct
gctttaaactgtatttatacttacaagcacaaatatatagttccttaccaaatacaattg
gacaatattgtaaatgaacaaaatcttaaaaatgagctagtgagatttcaaataagcgtt
gaacaatctgaaattcaagaggaacatagagaggggttgatgcccatattaatgagaatc
cttcatactaaaatgagtcaacgtgttggaatgcgtactggtggtaaagcaggtggactt
gttaaaagaaaaaccattttaagatttttggcaggtataaaagaagaagaaatgatggta
ttcattcgcatggcctttaaaccttttgaaaactacttaccaattcttaaagttgaaaaa
gaatctcagaacgatgttaaattatgtgcaatgattagagaactcattcccaatgttgat
cttgacaacgtcattccaccaaaacgtcttcaaagtgctatgaatctaatatcaacaatg
atagagcagtttggtggaaaaatgacaaaacatgtacttccacatttactgtcaatactt
gtgtgcattcttgctcaaactgttggtatacttgatttagttaatgatgtacatcctgat
tttttgaaaatgatcaaaaatgttaggaacactggaattaatgtgcttgctagattcttc
caacatttcgaatattatgactggacaagtgatgaaattgatgctgtatttgaaacagct
gtattcccttggttaaataaactgccaattgaaggcattcatagtccgactcctttattg
aaaatgtttgacatttggagtaaaaatcctcgttattatcctctttttgtgaaattaaat
aagaacaatcaaacaccaatcaactttgtaatagaactattatccaatgaaaaaactgag
aagtctgtgctcagaatgattatggaaattattgaaaagttactaactacactagacttt
gaaaaagaggatccagaagcaatggatgtcgatgacacgataaaagctaaatctcttttt
gatgttgttactggaaaagtagaaattgttagagatgatacaattaattatggttctgcc
atgttacttcctcacgtaagtaaaatattggcttttttggtaaagaaattgagagaacag
aagaaacatggagcaaatcgcacggaattaaccgttctatcgtcaattacggaatttgct
actgatcctgaaaccagtgatacattgctcactttgacattaccgattctcacgaaaaaa
tctggtgattccgaagacgttgttatgggatttttaacagcagttgctaacttaatgaag
cgtgttaataatcctgcaatatatttgcgacccgttcaacaacttttggctcttttaact
acgccacaagcgagaaaattattgatgcaagttctagaagaagttgctcgaaataacgaa
gatttacaaaataatcataggcttttggtagaactgaatgcttatgatcggcgttggatc
gaacaagctgattatgatcggagattaaacgcatttcaacagatcgacagcttgatcagg
gaagaaaaagtaaccgttgattttggtgtatctattattttaaattgctactacttttta
aaaactgaaaatgaacaatctatggaagatcgagctagcgaatgcttgaaatacataagt
gtttatttgtgcaaaaagttcaatgctgtaccgagcgacagaagatacctcgtagaagat
actatattgaacttgattcgcaatggaataaaggataaacgtgacaaggtaaagttgcag
tccatagcctatttagggcatatggccatggagtgtccagatgtgcatgtagtattacgc
gatctccacgccttaacaaacaaggtagatccagaagtggatttctttaacaatattgga
cacatacagcgccatcgtcatggtcgcgctctattaaagttctgtagcgtcgcaaaaacc
ctcactagagctccaaatccgagaacactttcgcaattcattttgcctcttgcatcttat
tatctgtgcaatgaaaaatatgcaaacaaggatggccataatactatcaccgcagctatt
gacaccgtcggtaccgtatgcagattgttgccatggaatcagtatgaattcgtactcaag
tactacttgttcaagttgcgaaacaatatggaacaccaaaaacaagtcattagaatagtg
gtagcgattttagacgctttccatttcgatctgtcaaaatataaagaagtcaatgaagcc
gttgaggataacaacgagaatgacgacgatgagagcgttgaagatgactcaaaattcgaa
aatgtcgaaaatgaaactgaagatgttcccaatgttgaagatgttgatgaatcggcagaa
aatgaaaatgccgaagaaaatgaaaatgctgaaccagacacggaagaagtccctattgtt
caagaaatacctattgtagaaagacaaacagtcctatcacaatatatggcgaggcgactc
gtgcagagtatttccactgtgttactgcctcaattgcaccgaagtatcaccgtacgagcc
cgtttagatggggcccacaaagtcaacaaaaagattgtacgtgatgatcaggaggaacgt
gatttgcaacgagtacccattgctttagctatggtcaaattgctacagaagctcccgagc
aatatactcgatacaaatgtgcgaggaatatttatgaaagtttgtaccttcttgaaatct
cgtcttgaatcggtgcgtagggacactcgaaaaattttagaggaaatcatgattactctt
ggacccgactatttacatcatttacttgtagaaatgaacagtttgttgactcgtggattc
caagttcacgttttagctgttactgttcatgcagttttaatcaaattagagccttcactt
gagcctaagcatattaaggcaaatatggcattgttacatagtgtgtgtaagatagattta
ttcgggccatcggccgaagagaaagagatttctggaatcataaaaaatacttcagaagct
aaagccactaagagttatgatatttacaaaattatgggccaattcactggtgcagactcg
ttggttcctttaattcaacctttacgcgatgttttacgcacgaattcatcaaaaaccatt
cgcaaggctactacatccttacaagaaattggaaagggacttgcacgtaacacttttata
ccccttacaaatttattgagttttcttcaaggcgtagtaaacgaaactataccggagatt
atgccagactctaaacgtaaaaaaaacaacgaggataaacaagcgaaatcgaaattcctt
actgacgaagatcgtacactttcactgattattcagccaccacctaaaacgagaatgggt
atcaagaccaaatcgaaaatttccgaagacaccaatgcaaacgtgatcatggaatttgga
ctgaggattttgagtttattattgaaacaaaataagctcaatgatcaggattcgaaaaag
caacttgatggattcgtgccatttttgagtcgttgtttagaatcacaacatgtagagttg
agtacattagcattgcgttgtctatgtcatgttgtggcgactgatttaccgaacgttcga
aagttttcaacggaaatttgtgaatcaatgtttaagattctgcacaaatatgcggtatca
ggtcttggtaaaggtgtcaatttcgatctcgtgatgactgctttcaaggccatgtctatt
ctagtaaaagatgctaaacattttaaacttactccagaacagttaaagattttattacaa
tatgttgaaaaagatatacatgatcatgaacgaagagcaacagggtttgatttactaaaa
gctattataaagcgaaaacttatagttccccaaatgcatgaagttatggaagaagtgtca
aaacttattgttacttcaaaatcagaagatgtgcggaaaagagctcgaaatgcttgttac
acctatttaatggattatcctgtggataaagagaacttagaaagtcgtataaatttcttc
ttcaggaatcttgaattctcggaggcttttggtcgcatgagtgtaataacaatggcatat
gaaatcattactacctttccacagcaaaaacttgaagaatttgcagaagaacttttctgt
ttacttgctccaagattggtcaatgaagaagatcagacttgtcagaaaaacgtagccaag
tgcataagagaattaataaaccgtatctcacataatctgaaaagcaaactttttaatttc
acttgtctttggatggaagaagaaaaactgaggttcagaagactagcagttcaagtttgt
ggaatgttcgtccaaacggaaaaaaatgacttttcttctagattagatagactcctacct
cttttgatgaaacaatttaataaaaatttagatgaaattgatgaaaatgccccagggcgt
ttcgtcaaacaagttaaatcaatttttgttaaggatcgtaaagtaaagagtatgaaaagt
ctgagagatcaccatttcattttagtttttgaactaattcttaagatatgtaaaaattgt
ccgaactttttgggcaaaggcgcaaatgagaaaaacaaataccagaaatacgttgatatt
ttgcgagattgctgtcattcacatttagttcatccacatttatgggtaagagagagggca
tctcaagtgcttgggtttgtactccatgctgtggatgttaagaaatggtcggctgaaaaa
ttacgcagtcttatcttagataacgtagatcaattggaccccggagtagatcacgaagaa
ttttttgatcaaattattaaaaatcttctatatttggcaaaattcgtagaaattgaaaat
acagaggaatcagaaaagaagatgtctttacattggctcataaaatccctgagaaagaaa
attaatttggaaataactcaagcaccacaatcaatagtagtgaggaaagcggtatttcac
tggatagcaggtgtgactgtcaatattgacatcgaaaaattaaagccaatgctgcctcaa
ttagtatcgccattggtgcgcgaaatgtcaactactgaagtggaaaatgcacctctccga
cagttagctaaagaagtatctacaatgttcaaaaaacttctggatgtggacgaatacact
cgactcttcaatgccgcaagtcaacatttggaagtgaaaagagccgaaaagaaggcagag
agatcccgccagtttgtaaccaatccagaaatagccaataaaagaaaattgaagaggcaa
gagaaaaagagaaaacgaaaatcagatgtaaaaagacggtcaaaacctaaaaagatgcga
atgaatgatgacgaagacaattaa
DBGET
integrated database retrieval system