Trichogramma pretiosum: 106653996
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Entry
106653996 CDS
T07644
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03020
RNA polymerase
tpre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106653996
09124 Replication and repair
03420 Nucleotide excision repair
106653996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpre03021
]
106653996
03400 DNA repair and recombination proteins [BR:
tpre03400
]
106653996
Enzymes [BR:
tpre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106653996
Transcription machinery [BR:
tpre03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106653996
DNA repair and recombination proteins [BR:
tpre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106653996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
106653996
NCBI-ProteinID:
XP_014229164
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDDQDPYEDEEGQEISSKLWQEACWIVINAYFDEKGLVRQQLDSFDEFIEMSVQRIVED
SPVIEIVAEVQHTTGEIEKPMKHLVKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTYA
APLYVDITKTIEKPDEECTSQHQKTFIGKIPIMLRSKYCLLAGLADRDLTELNECPLDAG
GYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKCEIRSCLEHSSRPTSTLWINMMSK
SGANLKKSAIGQRIVAVLPYIRQEIPIIIVFRALGFVADRDILEHIIYDFDDPEMMEMVK
PSFDEAFVIQEQNVAVSFIGARGSRPGITKEKLIKYGKEILQKEMLPHVGISDFCETKKA
YFLGYMFHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVKMYGQKF
VDRGKDFNLELAVKTKIITDGLRYSLATGNWGDQKKAHLARAGVSQVLNRLTFASTLSHL
RRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQASPIL
EFLEEWSMENLEEIAPSAINESTKIFVNGCWVGIHRDPEQLMKTLRKLRRQMDIIVSEVS
MIRDIRDREIRIYTDAGRISRPLLIVENQQLLLKKSHIDMLKERDYNNDGWQELVMSGVV
EYIDTLEEETVMISMSPDDLKQGKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQSPR
NTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSIVA
ILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDAEAKKFGDSEEQFEKPNRQTCQGMR
NALYDKLDDDGIISPGIRVSGDDVIIGKTMTLPENDDELNSTTKQFTKRDASTFLRNSET
GIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFSCEGI
TPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISSLLVDYGYQ
LRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRARD
GGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLKNNTFECKGCK
NKTQISQVRLPYAAKLLFQELMSMNIAPRLMVVS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgatcaagatccctacgaggatgaggaagggcaagaaatatcttccaagctc
tggcaagaagcttgttggattgtcatcaatgcatattttgatgaaaaaggtttggtgcga
cagcagcttgacagctttgatgaatttattgagatgtctgttcagagaatcgttgaagat
tcacctgtcatcgaaattgttgccgaggtccaacatacaactggagaaattgagaaacca
atgaagcatcttgtaaaatttgaacaaatttatttatccaaacctacacattgggaaaaa
gatggtgctccgtcgcccatgatgcctaatgaagcaagattgagaaatttgacttatgct
gcaccactttatgttgatattacaaaaactatagaaaaacctgatgaagaatgcacatcg
caacatcagaagacattcattgggaaaattccaattatgttgagatctaaatattgttta
ttggctggtttggccgatcgcgatttaactgaattaaacgagtgtcctttggatgctggt
ggctattttatcatcaatggatctgaaaaagtactgatagctcaagagaaaatggctact
aacaccgtttatgtttttagtatgaaagatggtaaatatgcctacaagtgtgaaataaga
tcttgtttagagcatagttcgaggccaacttcgacattatggatcaacatgatgtctaaa
agtggagcaaatcttaaaaaatcagctataggccaacgaattgtagcagttttgccatac
atcagacaggaaattcctatcattattgtatttcgagcacttggatttgtagctgatcgt
gatatacttgagcacatcatttatgatttcgatgatcctgaaatgatggaaatggtaaaa
ccatcttttgatgaggcatttgtgatacaagaacaaaacgtcgctgtcagctttataggt
gcccgtggttcaaggccaggtatcacaaaagagaaactcataaagtatggcaaagaaata
ttgcaaaaagaaatgttacctcatgttggtataagtgacttttgtgaaacaaagaaagcc
tactttcttggatatatgtttcatcgattgctttctgcttctcttggccgtcgtgagctc
gacgatcgagatcattatggtaacaaacgtctagatttggctggtccattgctagcattc
ttattccgaggtttgttcaaaaatctcatgaaagaagttaaaatgtatggtcaaaagttc
gtggacagaggaaaagattttaatttagaacttgccgtaaagaccaaaatcattacagat
ggtttgagatattccttagctactggtaattggggtgaccagaagaaagcccatttagct
agagccggagtatctcaggtattgaacaggctcacttttgcttcaacactctctcatttg
agaagagtaaactctccaattggcagagatggtaaattagccaagcctcgtcaattacat
aatactctgtggggaatgttgtgtccagctgagacccctgagggagctgctgttggtctg
gtaaaaaatttagctcttatggcatacatcagtgttggatcccaagcatcacctattctt
gagtttttggaagaatggtccatggaaaacttggaagaaattgctccaagcgcaattaat
gagtctacgaagatatttgtcaatggttgctgggtaggcattcacagagatccagagcaa
ctcatgaaaactcttagaaaattgagaaggcagatggacatcattgtgtcagaagtatca
atgatcagagatattcgtgatcgtgagatcagaatttataccgatgctggcagaatcagt
agacctttactgattgttgaaaaccaacaacttttgctgaaaaaatctcacattgacatg
ttgaaagaaagagattataacaacgatggatggcaagaattagttatgagtggagtagtg
gagtacattgatactctagaggaagaaacagtaatgatttccatgtcaccagatgatctg
aaacaaggcaaggagtacgcttactgtacaacttatacacattgtgaaattcatcctgcc
atgattttgggtgtttgtgcctcaatcattccattccctgatcacaatcaaagtcccaga
aacacctatcaaagtgctatgggtaaacaagctatgggagtttacattaccaacttccat
gttcgtatggacactctagctcacgtcctttattatcctcacaaacctcttgtcactacc
agatcgatggaatacttgagattcagagaattgccagcaggcatcaacagtattgtagct
atcttgtgttacactggttacaaccaagaagacagtgtcatcctcaatgcaagtgcagtc
gaaagaggattcttcagatctgtattttacagatcttacaaagatgccgaagcgaaaaag
ttcggcgacagcgaagaacagtttgagaagccaaaccgccagacctgccaaggtatgcgt
aatgccttgtacgacaaattggacgatgacggaatcatttcaccaggtattcgtgtatcc
ggtgacgatgttatcattggaaaaaccatgactcttccagaaaacgacgacgagttgaat
agcacaacaaaacaattcacaaagagagatgcctcgacatttttacgtaacagtgaaact
ggaatcgtcgatcaagttatgctgaccttgaacagcgaaggctacaaattctgcaaaatt
cgagttcgcagtgtacgcatccctcaaatcggcgacaaatttgcatctcgtcacggtcag
aaaggtacctgcggaatccagtaccgtcaagaggacatgcccttctcgtgcgagggcatc
acacccgacatcatcattaatcctcacgccatcccatcgcgtatgacgatcggtcacttg
atcgagtgcattcagggcaaagtttcgtcgaacaagggagaaatcggcgacgctacgccc
ttcaacgacgccgtcaatgtacaaaagatctcaagtctcctcgtggattacggctatcaa
cttcgaggcaacgaagtcatgtacaatggccacaccggccgcaagatcaatgcccaagtt
ttcttgggtccgacctactatcagcgtctcaaacatatggtggacgacaaaatccacagc
agagccagaggaccggttcagattttggtccgtcaacccatggagggtagggcccgagac
ggaggcctgcgtttcggcgagatggagcgcgattgtcaaatcagtcacggagcagctcaa
ttcctgcgtgaacgtctctttgaagtgtcggacccttaccgcattcacgtttgcaacttt
tgcggtctgattgccatagccaatctgaaaaacaacaccttcgaatgcaaaggctgcaag
aataaaacacagatatcccaggttcgattgccctatgcggccaagcttttgttccaggag
cttatgtccatgaatatcgctccacgtctcatggtggtgtcataa
DBGET
integrated database retrieval system
