Trichogramma pretiosum: 106654007
Help
Entry
106654007 CDS
T07644
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03020
RNA polymerase
tpre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106654007
09124 Replication and repair
03420 Nucleotide excision repair
106654007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpre03021
]
106654007
03400 DNA repair and recombination proteins [BR:
tpre03400
]
106654007
Enzymes [BR:
tpre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106654007
Transcription machinery [BR:
tpre03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106654007
DNA repair and recombination proteins [BR:
tpre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106654007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
106654007
NCBI-ProteinID:
XP_014229180
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDDQDPYDDDEGQEISSKLWQEACWIVINAYFDEKGLVRQQLDSFDEFIEMSVQRIVED
SPVIEIVAEVQHTTGEIEKPMKHLVKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTYA
APLYVDITKTVEKPDEECTSQHQKTFIGKIPIMLRSKYCLLAGLADRDLTELNECPLDAG
GYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKCEIRSCLEHSSRPTSTLWINMMSK
SGANLKKSAIGQRIVAVLPYIRQEIPIIIVFRALGFVADRDILEHIIYDFDDPEMMEMVK
PSFDEAFVIQEQNVAVSFIGARGSRPGITKEKLIKYGKEILQKEMLPHVGISDFCETKKA
YFLGYMFHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVKMYGQKF
VDRGKDFNLELAVKTKIITDGLRYSLATGNWGDQKKAHLARAGVSQVLNRLTFASTLSHL
RRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQASPIL
EFLEEWSMENLEEIAPSAINESTKIFVNGCWVGIHRDPEQLMKTLRKLRRQMDIIVSEVS
MIRDIRDREIRIYTDAGRISRPLLIVENQQLLLKKSHIDMLKERDYNNDGWQELVMSGVV
EYIDTLEEETVMISMSPDDLKQGKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQSPR
NTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSIVA
ILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDAEAKKFGDSEEQFEKPNRQTCQGMR
NALYDKLDDDGIISPGIRVSGDDVIIGKTMTLPENDDELNSTTKQFTKRDASTFLRNSET
GIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFSCEGI
TPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISSLLVDYGYQ
LRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRARD
GGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLKNNTFECKGCK
NKTQISQVRLPYAAKLLFQELMSMNIAPRLMVVS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgatcaagatccctatgacgatgatgaagggcaagaaatatcttccaagctc
tggcaagaagcttgttggattgtcatcaatgcatattttgatgaaaaaggtttggtgcga
caacagcttgacagctttgatgaatttattgagatgtctgttcagagaatcgttgaagat
tcacccgtcatcgaaattgttgccgaagtccaacatacaactggcgaaattgagaaacca
atgaagcatcttgtaaaatttgaacaaatttatttatctaaacctacacattgggaaaaa
gatggtgctccgtcgcccatgatgcctaatgaagcaagattgagaaatttgacttatgct
gcaccactttatgttgatattacaaaaactgtagaaaaaccagatgaagaatgcacatcg
caacatcagaagacattcattgggaaaattccaattatgttgagatctaaatattgttta
ttggctggtttggctgatcgtgatttaactgaattaaacgagtgtcctttggatgctggt
ggctatttcatcatcaatggatctgaaaaagtactgatagctcaagagaaaatggctacc
aacaccgtttatgtttttagtatgaaagatggtaaatatgcctacaagtgtgaaataaga
tcttgtttagagcatagttcgaggccaacttcgacattatggatcaacatgatgtctaaa
agtggagcaaatcttaaaaaatcagctataggccaacgaattgtagcagttttgccatac
atcagacaggaaattcctatcatcattgtatttcgagcacttggatttgtagctgatcgt
gatatacttgagcatatcatttatgatttcgatgatcctgaaatgatggaaatggtaaaa
ccatcttttgatgaggcatttgtgatacaagaacaaaacgttgctgtcagctttataggg
gcccgtggttcaaggccaggtatcacaaaagaaaaactcataaagtatggcaaagaaatt
ttgcaaaaagaaatgttacctcatgttggtataagtgacttttgtgaaacaaagaaagct
tactttcttggatatatgtttcatcgattgctttctgcttctcttggccgtcgtgagctc
gacgatcgagatcattatggtaacaaacgtctagatttggctggtccattgctagcattc
ttattccgaggtttgttcaaaaatctcatgaaagaagttaaaatgtatggtcaaaagttc
gtggacagaggaaaagattttaatttagaacttgccgtaaagaccaaaatcattacagat
ggtttgagatattctttagctactggtaattggggtgaccagaagaaagcccatttggca
agagccggagtatctcaggtattgaacaggctcacttttgcttcaacactctctcatttg
agaagagtaaactctccaattggcagagatggtaaattagccaagcctcgtcaattacat
aatactctgtggggaatgttgtgtccagctgagacccctgagggagctgctgttggtctg
gtaaaaaatttagctcttatggcatacatcagtgttggatcccaagcatcacctattctt
gagtttttggaagaatggtccatggaaaacttggaagaaattgctccaagcgcaattaat
gagtctacgaagatatttgtcaatggttgctgggtaggcattcacagagatccagagcaa
ctcatgaaaactcttagaaaattgagaaggcagatggacatcattgtgtcagaagtatca
atgatcagagatattcgtgatcgtgagatcagaatttataccgatgctggcagaatcagt
agacctttactgattgttgaaaaccaacaacttttgttgaaaaaatctcacattgacatg
ttgaaagaaagagattataacaacgatggatggcaagaattagttatgagtggagtagtg
gagtacatcgatactctagaggaagaaacagtaatgatttccatgtcaccagatgatctg
aaacaaggcaaggagtacgcttactgtacaacttatacacattgtgaaattcatcctgcc
atgattttgggtgtttgtgcctcaatcattccattccctgatcacaatcaaagtcccaga
aacacctatcaaagtgctatgggtaaacaagctatgggagtttacattaccaacttccat
gttcgtatggacactctagctcacgtcctttattatcctcacaaacctcttgtcactacc
agatcgatggaatacttgagattcagagaattgccagcaggcatcaacagtattgtagct
atcttgtgttacaccggttacaaccaagaagacagtgtcatccttaatgcaagtgcagtc
gaaagaggattctttagatctgtattttacagatcttacaaagatgccgaagcgaaaaag
ttcggcgacagcgaagaacagtttgagaagccaaaccgccagacctgccaaggtatgcgt
aatgccttgtacgacaaattggacgatgacggaatcatttcaccaggtattcgtgtatcc
ggtgacgatgttatcattggaaaaaccatgactcttccagaaaacgacgacgagttgaat
agcacaacaaaacaattcacaaagagagatgcctcgacatttttacgtaacagtgaaact
ggaatcgtcgatcaagttatgctgaccttgaacagcgaaggctacaaattctgcaaaatt
cgagtccgcagtgtacgtatccctcaaatcggcgacaaatttgcatctcgtcacggtcag
aaaggtacctgcggaatccagtaccgtcaagaggacatgcccttctcgtgcgagggcatc
acacccgacatcatcattaatcctcacgccatcccatcgcgtatgacgatcggtcacttg
atcgagtgcattcagggcaaagtttcgtcgaacaagggagaaatcggcgacgctacgccc
ttcaacgacgccgtcaatgtacaaaagatttcaagtctcctcgtggattacggctatcaa
cttcgaggcaacgaagtcatgtacaatggccacaccggccgcaagatcaatgcccaagtt
ttcttgggtccgacctactatcagcgtctcaaacatatggtggacgacaaaatccacagc
agagccagaggacctgtacagattctggtccgacagcccatggagggtagggccagagat
ggaggcctgcgtttcggcgagatggagcgcgattgtcaaatcagtcacggagcagctcaa
tttctgcgtgaacgtctctttgaagtgtcggacccttaccgcattcacgtttgcaacttt
tgcggtctgattgccatagccaatctgaaaaacaacaccttcgaatgcaaaggctgcaag
aataaaacacagatatctcaagttcgattgccctatgcggccaagcttttgttccaggag
cttatgtcgatgaacatcgctccacgtcttatggtagtctcctaa
DBGET
integrated database retrieval system
