Trichogramma pretiosum: 106654815
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Entry
106654815 CDS
T07644
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106654815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpre03041
]
106654815
Spliceosome [BR:
tpre03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106654815
Complex C
U5 SnRNP specific factors
106654815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
106654815
NCBI-ProteinID:
XP_014230333
LinkDB
All DBs
Position
Unknown
AA seq
2379 aa
AA seq
DB search
MSIPPYHLLGPNPWAQMMAQQQAAQMAAAQAAHAQAAAQAQAAHHAHMQAMSTGPPLPQP
SPSMKQSEIITEDKLQEKAQKWQQLQSKRFAEKRKFGFVDAQKEDMPPEHIRKIIRDHGD
MSSRKYRHDKRVYLGSLKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWV
IEPLYIAQWGTMWVMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQIEM
DADEDSPVAEWFYDHKPLVGTKYVNGSTYRKWNLSLPVMAALYRLANPLLTDLVDNNYFY
LFDPKSFFTAKALNMAIPGGPKFEPLVKDSNAADEDWNEFNDINKIIIRQPIRTEYRIAF
PYLYNNMPHYVHLSWYHAPNVVYIKTEDPDLPAFYFDPLINPISHRNSLKTNEPVIDDDE
EYVLPEGVQPFYQETPLYTDNTANGIALLWAPRPFNTRSDRTRRAIDIPLVKSWYREHAP
PGQPVKVRVSYQKLLKYFVLNALKHRHPKPQKKRYLFRSFKSTKFFQTTMIDWVEAGLQV
CRQGYNMLNLLIHRKNLNYLHLDYNFNLKPSKTLTTKERKKSRFGNAFHLCREILRLTKL
IIDSHVQYRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRF
NTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQR
VESHFDLELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIE
NMILRYVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLK
DGPYISPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRL
NQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEK
ITDAYLDQYLWYEADKRRLFPPWVKPADAEPPPLLVYKWCQGINNLQDVWDVSEGECNVL
LESKFEKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQF
ASFIAQYYGLVLDLLVLGLQRASEMAGPPQMPNEFLTFQDVASEVAHPIRLYCRYVDRIH
LFLRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWD
IKNRLPRSATTVQWENSFVSVYSKDNPNLLFNMSGFECRILPKCRMTHEEFTHRDGVWNL
QNEVTKERTAQCFLRVDDESLQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFRE
AVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIP
QSDLRWSKQTEVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEA
NAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWT
HQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYK
KLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQI
FRAHLWQKVHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYK
WNVSRPSLLADSKDVMDNTTTQKYWIDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYP
SPTGLLIAIDLAYNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSS
EPTEPYLSSQNYGELFCNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQ
LFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHL
LDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRL
ILILRALHVNTERTKVVLKPDKTTITEPHHIWPSLTDDEWVKVEVQLKDLILADYGKKNN
VNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIIT
ATTSNYETQSFSSKTEWRIRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVT
ISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQTVHLPSTLPGHQYLKEMEPLG
WIHTQPNELPQLSPQDITTHAKVMAENPAWDGEKTIVITCSFTPGSCSLTAYKLTPSGFE
WGKQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPNQGSWNYNFMGVRHDPNMKYEL
QLMNPKEFYHEVHRPAHFLNFASLEDGDGVGADREDMYA
NT seq
7140 nt
NT seq
+upstream
nt +downstream
nt
atgtccataccgccttatcatttgctgggtccaaacccatgggcccagatgatggctcag
caacaagctgcccaaatggctgcagctcaagctgctcatgctcaagccgctgctcaagct
caagctgctcatcatgctcatatgcaagcaatgagtacaggaccaccactgcctcaacca
tcaccctcaatgaaacaatctgaaattattacagaagataaattgcaagagaaagctcaa
aaatggcaacagcttcaatccaaacgatttgctgaaaagcgcaaatttggttttgttgat
gctcaaaaagaagatatgcctccagagcatattagaaaaataataagagatcatggtgac
atgagcagtcgtaaatatagacatgataaacgagtttatttaggttctcttaaatatatg
cctcatgcggtgatgaagttacttgaaaatatgcccatgccttgggaacaaataagagat
gtcaaagtattgtaccacatcactggtgctattacatttgtcaatgaaataccatgggtc
atagagcctctgtacatagctcaatggggtaccatgtgggttatgatgagaagagaaaaa
agagatcgaagacattttaaacgcatgagatttccaccttttgatgatgaagaacctcca
ttagattatgctgacaatgttttagatgttgaacctttggaagctatccaaattgaaatg
gatgcagacgaagattcccctgtagctgaatggttttatgatcataaacctcttgtagga
acaaagtatgtaaatggctccacttatagaaagtggaacttatctctaccagttatggca
gctctctaccgtctagcaaatcccttgttgaccgatttagtagataacaattacttttat
ctatttgatcctaaatcattcttcactgctaaagccttgaatatggctattcctggtgga
ccaaagtttgaacctctagttaaagattcaaatgctgccgatgaagattggaatgaattt
aatgatattaacaagattataattaggcaaccaattagaactgaatacagaattgctttt
ccttatttgtataataacatgccgcattatgtccatctatcatggtatcacgctccaaat
gttgtgtacattaaaacagaagatccagatttacctgccttctactttgatcctctgatc
aatccaatttctcatagaaactcgttaaagacaaatgaacctgtaattgatgatgatgag
gagtatgtactaccagaaggtgttcaaccattctatcaagaaactcctctctacacagac
aatacagctaatggcattgctttgctttgggctccacgaccattcaatactagatctgat
agaactagaagagcaatcgatattcccttagtaaagtcatggtacagagaacatgctcca
ccaggacaacccgtgaaagtcagagttagttatcaaaaattactgaaatattttgttttg
aatgccttgaaacacaggcaccctaaacctcaaaagaaaagatatctattccgttcattc
aaatcaacgaaattcttccaaacaactatgattgattgggtagaagctggtttacaagta
tgccgtcaaggatataatatgttgaatttattgatacaccgaaagaatctgaactacctt
catctggattacaatttcaacttaaaacctagcaagacactaaccaccaaggaaagaaaa
aaatctcgtttcggaaacgccttccatctttgccgcgaaattcttcggctgactaagttg
attattgattcacatgttcaataccgcttgaataatgttgatgctttccaactagctgat
ggtcttcaatatatctttgctcatgttggtcagttaactggaatgtatcgttataaatac
aagttgatgagacagataagaatgtgcaaagatttgaagcatttaatttactatcgattc
aatactggtccagttggaaaaggaccaggctgcggattttgggcacctggttggcgtgtg
tggcttttcttcatgcgtggaatcacacctctattagaaagatggcttgggaatttattg
tcgagacaatttgaaggacgacactctaaaggtgttgcaaaaactgtgactaaacaaaga
gtagagtctcactttgatctagagcttagagcatctgttatgcacgatattgtagacatg
atgccagaaggtatcaaacagaataaagccagaacaatcttgcagcatttgagtgaagcc
tggagatgttggaaagcaaacattccgtggaaggttccaggattgcccattcctattgaa
aatatgattcttagatacgtcaaaatgaaagctgattggtggacaaatactgcgcattac
aatcgcgagcgtattcgtagaggagctacagttgacaaaaccgtatgtaaaaaaaatttg
ggacgcctcactcgactctacttgaaagctgagcaagaacgtcaacataactatctgaag
gatgggccatatatttcgcctgaagaagccgttgcaatttacactactaccgttcattgg
cttgaatcaagaagattcgctccaattcctttcccaccactttcttataaacatgacacc
aaattacttatattagcccttgaaagattgaaagaagcttacagcgttaaatcaagattg
aatcagagccaaagagaagagctcggattaattgaacaagcctatgataatcctcatgaa
gcattatccaggatcaagcgtcatttgcttactcaaagagcatttaaagaagttggtatt
gaattcatggatctgtacagccatttgataccggtttatgatgtagaacctttagaaaaa
atcacagatgcatatctagatcaatacttgtggtacgaagccgataagcgtcgtcttttc
ccaccatgggttaagcccgctgatgccgaacctcctccattacttgtctacaagtggtgc
caaggtataaataaccttcaggatgtttgggatgttagcgaaggtgaatgcaatgttctg
ctggaatcgaagtttgagaaactgtacgaaaagattgacttaaccttactcaatcgatta
ttgcgtctcattgttgatcataatattgctgattacatgacagccaaaaacaacgttgtc
ataaattacaaagacatgaatcacaccaacagttatggcatcataaggggtcttcaattt
gcttcgtttattgcacaatactatggcctcgtattggatttgttggtccttggtctgcaa
agggctagtgaaatggctggtccaccacagatgcccaatgaattccttacattccaggac
gtcgcttccgaagttgcccatccaatccgcttgtactgtcgttacgtcgatagaattcat
cttttcttgcgcttcagtgccgatgaagcgcgtgatttgattcagcgatatttaacagaa
catccagatcctaacaatgaaaatatagttggctacaacaataagaaatgttggccacgt
gatgcgcgtatgcgtctgatgaaacacgatgttaatcttggccgtgctgtcttttgggat
atcaaaaaccgtttgcctcgttcagcaactactgttcaatgggaaaacagttttgtcagt
gtttacagcaaagacaatccaaatttgctatttaatatgagtggctttgaatgccgtata
ttgcctaaatgtcgaatgacgcatgaagaatttacgcacagagatggtgtttggaatctt
cagaatgaagtaaccaaagaacgtacggcacaatgctttttaagagtcgatgatgagagt
ttacaaagattccacaatcgtgtccgacaaattctcatggcatcaggctcaactactttc
acaaaaattgtcaacaaatggaacactgcattgattggtcttatgacctatttccgtgaa
gcagttgtcaatacacaagaattgctcgatttattagttaaatgtgagaacaaaatacaa
actcgtatcaaaattggtcttaattcaaaaatgccttcgagatttccacccgttgtattt
tatacaccgaaagaattgggaggcttaggaatgttgtctatgggtcatgtacttattcca
caatcagatcttcggtggtctaaacagactgaagtgggtattactcatttccgttcgggt
atgagccacgacgaagatcagctcattccaaatttgtacagatatattcaaccctgggaa
tctgaattcattgattcacaaagagtgtgggcagaatacgcattaaaacgtcaagaagct
aatgcacaaaatcgtcgtttaactcttgaagatctcgaggacagttgggatcgtggtatc
cctcgtattaatactttgttccaaaaagacagacacactcttgcgtatgacaagggttgg
aggatacgtacagaatttaaacaatatcaggttttgaagcaaaatccgttctggtggact
catcaacgtcacgacggcaaattgtggaatttaaataactatagaacagatatgattcaa
gctttgggtggtgttgaaggaatcttggaacacactcttttcaaaggaacatacttccct
acatgggaaggtctgttctgggaaaaagcatcaggctttgaagaatcaatgaagtacaaa
aaattgactaacgctcaacgatctggtttgaatcaaattcctaatcgtcgttttaccttg
tggtggtcgcccactattaacagagccaatgtatatgttggtttccaagtacaactagat
ttgacaggaattttcatgcacggaaagattccaactttaaaaatttctcttattcaaatt
ttccgtgctcacttgtggcaaaaagtccacgagtccatcgttatggatctttgtcaagtt
tttgatcaagaacttgatgctctagaaattgaaacagtacaaaaagaaaccatacatcca
cgtaaatcttacaaaatgaactcttcatgtgccgatattttactgttctctgcatacaag
tggaacgtctcaagaccatcgcttttggctgactctaaagacgtgatggacaatactacg
acgcaaaaatactggattgacgttcagttacgttggggtgattatgattctcacgacata
gaacgttatgcccgagccaaatttttagattacactactgacaacatgtcaatatatcca
tctccaaccggtttattgattgctattgacttggcctacaacttacacagtgcatatggt
aactggttccctggttgcaagcctttaattcaacaggccatggctaaaattatgaaagct
aatcctgctctgtatgtgttgagagaacgtataaggaaagcattgcagttgtactcgtcc
gagcccactgagccctacctatcgtcgcaaaattacggagagctgttctgtaaccaaatt
atttggttcgtcgacgataccaacgtttatcgtgttactattcacaaaacgtttgaagga
aacttgacgacgaagcccatcaacggcgcaattttcattttcaatcccagaaccggacaa
ctgtttctcaagattattcatacttcggtatgggcaggtcagaaacgtctgggtcaatta
gctaagtggaagactgcagaagaagttgctgctcttattcgttcactgcctgttgaagaa
caacctaagcaaattatcgttactcgtaagggaatgttggacccgctggaagtgcattta
cttgacttcccaaatattgttattaaaggttccgagttacaattaccattccaagcttgt
ctcaaagttgagaagttcggtgatctcattttgaaagcaactgaaccacaaatggtatta
ttcaatctatacgatgattggctcaaaacaatttcatcttatactgcattctctcgttta
attttaattctccgtgctctgcacgtgaatactgaaagaaccaaagtggttcttaaacca
gataaaacaactatcactgaacctcatcacatatggccatcacttactgatgacgaatgg
gtcaaggttgaagtacaattgaaggatctaattcttgccgattatggtaagaagaacaac
gtcaacgttgcttctttaacacagtccgaaattcgagacattattcttggtatggaaatt
agtgcaccatcggctcaaagacaacaaattgctgaaattgagaagcagactaaagaacaa
tctcaactcactgctactacaaccagaacagtcaacaaacacggtgatgaaattattacc
gcaacaacatccaactacgaaacacaatccttcagttccaaaactgaatggcgtattcga
gccatttcagctactaatttgcatttgcgaacaaatcatatttacgtcagttctgatgat
atcaaggaaactggttacacgtacattttaccgaaaaacgttctaaagaaattcgtgact
atctccgatttgcgtgctcaaatcgccggatatttatatggtgtcagtccacctgacaat
cctcaagtaaaagaaattagatgcattgtcatgcctcctcaatggggaacccatcaaact
gtgcatctccccagtacgttacctggtcatcagtatctcaaagaaatggaacctttgggg
tggattcacactcaacctaatgaattgcctcagttgtcaccacaggatattacaacacac
gctaaagtgatggcagaaaatccagcttgggatggtgaaaagacaatagtgataacttgc
agtttcactcctggttcctgttctctaacagcttataagctgactccaagcggatttgaa
tggggtaaacaaaacaccgacaaaggaaataatccaaaaggttaccttccaagtcattac
gaaaaggttcaaatgttactatctgatagattccttggattcttcatggtaccgaatcaa
gggtcatggaattataactttatgggtgtgagacacgatccaaatatgaagtatgaactt
caattgatgaacccgaaagaattttaccatgaagtacacagacccgcccacttccttaac
tttgcaagtctggaagatggtgatggtgttggagcagatcgtgaagatatgtacgcttaa
DBGET
integrated database retrieval system
