Trichogramma pretiosum: 106654882
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Entry
106654882 CDS
T07644
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
tpre
Trichogramma pretiosum
Pathway
tpre04382
Cornified envelope formation
tpre04512
ECM-receptor interaction
tpre04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106654882
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106654882
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106654882
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpre04147
]
106654882
00536 Glycosaminoglycan binding proteins [BR:
tpre00536
]
106654882
Exosome [BR:
tpre04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106654882
Glycosaminoglycan binding proteins [BR:
tpre00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106654882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106654882
NCBI-ProteinID:
XP_014230468
LinkDB
All DBs
Position
Unknown
AA seq
1929 aa
AA seq
DB search
MIRQTWRFVAVFVSCLVIIAEGRTPQFLNRTWPETGEASQRGDLPGILFDDKDDVYDEEN
YPDEYSTRSSTRNENEVHRNYDDEENTDINWNDYKGYKPNVNEGHRQDVNSRTDYGQNVN
NRDDYNKNGYEQTYYNRNNQGRNGYPNTYNREGQTGYDQSSYDRDNQSRRTQDERYNLHY
NHQEDYYSKQQEHGYPSSYSVYPAPGASKNCSGSNCCFPKCFAEKGSRGPPGLMGPVGPK
GERGFPGAEGFVGPKGDKGDPGPQGQRGIRGERGKMGLPGHPGQNGVPGIMGAPGPSGIP
GRDGCNGTDGIPGHQGFPGEPGPRGLPGSVGSKGDKGEAGHCGRLLVGQKGEPGIDGVQG
SRGIPGPQGPPGYPGQKGETGPMGLTGPPGNKGEKGNMGVGFEGSKGDKGQKGEVGLPGE
NSLYPFSSNPQETVGPVGLTGAKGDKGDIGPPGLKGEPGNVGDIGLPGFNGPKGERGLPG
APGIRGRDGYSGPPGPPGRKGDRGYDGVDGLPGPSGLKGDTGPAGLPGIPGLRGPPGPPG
GGKGQPGPPGEKGPRGYPGPIGIRGADGLPGIPGPRGPVGPAGGPGLPGIPGSEGPPGEK
GDKGDAGLNGFPGEVGPRGFTGAIGPPGLRGPQGEKGLSIVGPSGMDGVPGRDGSKGQKG
EKGYTGPRGRPGDSLEGIPGPPGKPGLPGEPGLPGKDGMFGFQGPMGEKGDSGGKCSQCF
PGIKGAKGDRGIDGKDGFPGARGPPGERGFPGEPGLDGLPGPTGPPGNRGNDGTPGAPGP
QGESGKDCLISKEQLNTEKGQKGERGELGRPGPFGPIGPVGEKGVQGSTGFPGLKGDKGD
AGFPGQDGIPGRPGISGSKGETGLSIKGDQGERGRDGFSGQKGEPGFPGMKGDAGICPPL
NIEHVSKGPAGDRGPKGEPGNPGYDGEKGDRGYPGDIGLPGPPGLLGVPGPVGPRGLPGP
RGEKGNTGPIGFPGEPGLVGQRGFPGLPGLKGHKGEAGISVKGIQGLQGPQGPKGDMGLP
GPEGKEGPIGHSGLPGLTGEKGELGEPGYNGIPGKPGDKGDTGPLGPPGPPGIMGTPGTD
GLKGEQGIPGEPGRTGLTGLPGPKGDMGVPGIDGPKGFSGRRGPPGLQGRPGIDGAPGVK
GERGEKGFQGFPGMPGIDGKPGKPGEQGPKGDIGYPGEPGPMGPLGAPGDKGDLGDRGFT
GQKGDPGQVSEKGQKGEPGMPGIRGPPGLTGRDGIDGEKGEAGLPGYGRDGLPGEKGEPG
LPGRDGISGEKGMKGDIGFRGYPGLKGEKGFIGPQGEPGLPGLDGVDGEKGDIGPQGIAG
FPGLDGEVGPPGRPGFDGPKGELGPAGFEGPIGYPGVPGEKGHRGPPGLTINVKGEKGEP
GLPGYPGRDGEKGDIGFPGPAGPPGEKGDKGGIGMPGYPGPHGLQGIKGDRGPIGFTGPP
GKTVKGDKGLPGSVARPGRDGIPGLPGIKGDMGLPGLPGIKGEPGLPGPLGPPGPKGDMG
LPGPVGPPGKDGSPGLEGLPGLTGDKGYKGEPGQPGLFGAPGQKGDRGFPGREGKDGIPG
EKGDRGWDGVPGLRGPPGEKGDPGLPGYDGKMGIDGITGPKGDKGDACLALPMGKGEKGD
RGFPGPMGAPGMLGEKGNHGLPGLPGLDGQKGEPGLPGSIGPPGLRGNPGLLGPPGPQGL
TGPPGIPGVPGEPGLPCETQPDYLTGILLVKHSQSKFVPECEKGHIKLWDGYSLLYTDGD
ERAHSQDLGYSGSCVRKFSTMPFLFCDVNSVCHYASRNDRSYWLSTNSPIPMMPVEEHHI
EEYISRCVVCEVPANVLAVHSQSLNIPECPEGWSGLWIGYSFVMHTGAGSQGGGQSLSSP
GSCLEDFRATPFIECNGAKGHCHYYANEFSFWMATIEDRDQFQKPEKQTLKAGNLRSRIS
RCQVCLKNT
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atgatccggcagacatggcgcttcgtcgccgtttttgtatcgtgcttggtcatcatcgca
gaagggcggaccccacaattcctaaataggacatggcctgaaaccggggaagcatcacaa
cgtggtgatttaccaggtatacttttcgatgacaaagacgatgtctacgacgaagaaaat
tacccagatgaatattcaacacggtcatctacacgaaatgaaaatgaggttcatcgaaat
tatgacgatgaagaaaatactgatattaactggaatgattataaaggatataaaccaaac
gttaatgaaggtcatcgtcaagatgtaaattcacgaactgattatggccaaaatgtcaat
aacagagatgattataacaaaaatggctatgaacaaacctattacaatcgaaataatcaa
ggaagaaatggttatccaaatacctacaatcgcgaaggtcaaactggttacgatcaaagc
agctatgatcgagataatcaatcaagaagaactcaagatgaacgttataatcttcactat
aatcatcaagaagactactatagtaaacaacaagaacatggctatccaagcagttactcg
gtatatccagcccctggtgcaagtaaaaattgctccggaagcaattgttgtttccccaaa
tgtttcgctgaaaaaggatcgagaggacctcctggattgatgggacctgtcggacctaaa
ggtgaacgtggttttccaggggctgagggattcgtaggacccaaaggagacaaaggagac
cctggtccccagggacagcgaggcatacgaggtgaaaggggaaaaatgggtctgcccggt
catccaggtcagaacggtgttcctggaattatgggtgctccgggtccctctggtattccc
ggtagagacgggtgcaacggaacagatggcataccagggcatcaaggttttcccggtgag
ccagggcccagaggtctaccaggttctgtaggctcaaaaggagataaaggagaagcaggt
cactgtggtcggttgctcgttggtcaaaaaggtgagcctggaattgatggagtacaagga
tcccgaggtattccaggccctcaaggtcctcctggttatccaggacaaaaaggcgaaaca
gggccaatgggtttgaccggaccaccgggtaataagggagaaaaaggaaacatgggtgtt
ggtttcgaaggatctaaaggagataagggacaaaaaggagaagttggattgccgggtgaa
aattctttgtatcctttttcatcgaatccccaagaaactgttggtcctgttggacttacg
ggagccaaaggagataagggtgatattggacctccaggtcttaaaggagaaccaggaaat
gttggagacataggtttgccagggtttaatggtcctaaaggtgaaaggggtctccccgga
gcgcctggaatacggggtcgtgatggctattccggccctccaggaccacctggtcgtaaa
ggagacagaggctatgatggagtcgatgggttgcctggaccatcaggattaaaaggtgat
acaggtccagctggattacctggaataccgggtctaagaggtcctccaggacctccagga
ggtggaaaaggacaacctggtccacctggcgaaaaaggacctcgaggatacccgggacct
attggtataagaggagcagatggattaccaggaatacctggtccacgagggcccgttgga
ccagctggaggtcctggtttaccgggaattcctgggtcagaaggtccaccaggtgaaaag
ggtgacaaaggtgacgctggtctaaatggttttcctggcgaagtaggaccccgaggattc
acgggagctataggacctccaggacttaggggccctcaaggagaaaagggtctttctatt
gttggtccgtcgggtatggatggtgtacctggaagagatggaagtaagggtcaaaaagga
gaaaaaggctacacaggtcctcgaggtagacctggtgattcgttagaaggaatacctggg
cctccaggaaaaccaggtcttccaggagaaccaggtttaccaggaaaagatggaatgttt
ggttttcaaggaccaatgggagaaaaaggagacagtggtggaaaatgttcacaatgtttc
ccaggaatcaaaggtgctaaaggagatcgaggcatcgatggcaaagatggatttccaggt
gctcgaggaccccctggagaaagaggatttcctggtgagcctggtcttgatggtcttccg
ggacctacaggtcctccaggaaataggggtaatgatggtacacctggcgcacctggtcct
caaggagagtctggaaaagactgtcttattagcaaagaacagctcaatacggagaaaggg
caaaaaggtgaacgaggagaattgggtaggcctgggccgtttggacctattggtccagta
ggtgaaaagggtgtgcaaggaagtacagggtttccaggtctaaaaggagataagggtgat
gctggtttccctggacaagatggtatacccggtcgacctggtatatcaggcagcaagggt
gaaacgggattgagtatcaaaggtgatcaaggtgaaagaggtcgtgatgggttctcaggt
caaaaaggagaaccaggttttcctggaatgaaaggagatgcaggaatatgtccaccttta
aatattgaacatgtatcgaaaggacctgctggagatagaggtcctaaaggtgaaccagga
aatcctgggtatgatggcgaaaaaggtgatcgaggttacccgggtgacataggattgcca
ggaccaccaggtttactcggagttcctggaccagtcggtccaagaggtttgccaggccct
agaggagaaaaaggaaacacaggaccaataggatttccgggagagccaggtctggttggt
caaagaggtttcccaggtttaccaggcctgaaaggtcataaaggagaagctggtatatcg
gtcaagggaattcaaggattacagggtcctcaaggtcccaaaggtgatatgggtttgcca
ggcccagaaggaaaggaaggacccattggtcattcaggtttacctggattgacgggagaa
aagggagaattgggagagcctggatacaatggtattccaggaaaacctggagataaagga
gatactggaccactgggtccaccagggcctccaggaataatgggaacaccaggaacggat
ggtttaaaaggagaacaaggtatacctggagaacctggaagaactggtttaacgggttta
cctggtccaaagggagatatgggagtgcctggaattgatggaccgaaaggcttttcagga
agaagagggccacctggtttacaaggacgtcctggtattgatggagcaccgggtgtaaaa
ggagagcgaggagaaaaaggattccaaggtttcccaggtatgcctggaatagatggaaag
ccaggaaaaccaggagaacaaggacctaaaggtgatataggataccctggtgaacctggt
ccaatgggaccgcttggagcacctggagacaaaggagatcttggtgaccgaggtttcacg
ggtcaaaaaggtgatcctggtcaagtttcagaaaaaggtcagaaaggcgaaccaggaatg
ccaggtataagaggaccaccaggtttgactggtcgagatggtattgatggagaaaaagga
gaagcgggtctgcctggatatggtcgcgatgggctccctggtgaaaaaggtgagcctggc
ttacctggaagagatggtatctcaggtgaaaaaggaatgaaaggcgatatcggtttccgt
ggttacccaggtctcaaaggcgaaaaaggtttcattggaccccaaggagagcctggcctg
cctggattagatggagtagatggtgaaaagggagatattggccctcaaggtattgcaggc
tttcctggattagacggcgaagtaggtccaccaggacgtccaggattcgatggaccaaaa
ggagagcttggacctgcaggttttgaaggcccaataggatatcctggagtacccggagaa
aaaggacatagaggaccacctggtcttaccatcaatgtaaagggagaaaaaggtgaacct
ggattaccaggttacccaggtcgagacggggaaaaaggtgatatcggattccctggtcca
gctggacctcctggagaaaaaggtgacaagggtggtattggcatgcctggatatccagga
ccgcacggacttcaaggaatcaaaggtgatcgaggacctataggttttactgggcctcct
ggtaaaacagtgaagggagacaaaggcttaccaggttcagttgcaaggccaggtcgagat
ggaattccaggcttaccaggtataaaaggtgacatgggattacctggtttaccaggtatc
aaaggagagcctggactaccgggtcctttaggtcctcctggtcctaaaggcgatatggga
ctaccgggtcctgtaggacccccaggaaaagatggcagtcctggactcgaaggattacca
ggtttaacaggtgacaaaggttacaagggagaacctggtcaacccggtctgtttggagct
cctggtcaaaaaggagacagaggattcccaggtcgagaaggcaaggatggaataccggga
gaaaaaggtgatcgaggttgggatggagttccaggcttacgaggtcctccaggagaaaaa
ggtgatcctggcttaccaggctatgacggaaagatgggtatagatggtattacgggtccg
aaaggtgataaaggcgatgcatgcttagcattaccgatgggcaaaggtgaaaagggtgac
cgtggattcccaggacctatgggagctccaggaatgttgggtgaaaagggtaaccacgga
cttcctggattaccaggattagacggacagaaaggtgaaccgggtctacctggatcgata
ggacctcccggcttacgaggaaatcctggtttactgggtcctccaggaccgcaaggtttg
acaggaccaccaggtattcctggagttccaggtgaaccaggccttccgtgtgaaacacaa
ccagattacctgactggaatattactcgttaaacacagtcaaagtaaattcgtgcctgaa
tgtgaaaaaggacatataaaattatgggatggatattcgttactttacactgatggagat
gaaagagctcactctcaagatttaggttactctggttcttgtgtacggaaattctctacg
atgccattcttgttttgtgacgtaaatagtgtatgccactatgcaagtcgaaatgatcgg
tcttattggttatcaacaaatagccccatacctatgatgccagtcgaggaacatcatata
gaagaatatatatctagatgtgtcgtttgtgaagttcctgctaatgtattggcagtacat
agtcaatctttgaacattcctgagtgccctgagggatggtcaggtctctggattggatat
agttttgtcatgcacactggtgctggttcgcaaggtggtgggcaatcgttatctagtcct
ggttcgtgtctcgaagacttcagagcgactccatttatcgaatgcaatggagctaaagga
cattgccattactacgccaacgaattcagtttttggatggctacgatagaagatcgtgat
caattccaaaaacctgaaaagcagaccctcaaagcgggaaatctacgttctcgaataagt
cgttgccaagtgtgtttgaaaaatacgtaa
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integrated database retrieval system
