Trichogramma pretiosum: 106654882
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Entry
106654882 CDS
T07644
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
tpre
Trichogramma pretiosum
Pathway
tpre04512
ECM-receptor interaction
tpre04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106654882
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106654882
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpre04147
]
106654882
00536 Glycosaminoglycan binding proteins [BR:
tpre00536
]
106654882
Exosome [BR:
tpre04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106654882
Glycosaminoglycan binding proteins [BR:
tpre00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106654882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106654882
NCBI-ProteinID:
XP_014230468
LinkDB
All DBs
Position
Unknown
AA seq
1929 aa
AA seq
DB search
MIRQTWRFVAVFVSCLVIIAEGRTPQFLNRTWPETGEASQRGDLPGILFDDKDDVYDEEN
YPDEYSTRSSTRNENEVHRNYDDEENTDINWNDYKGYKPNVNEGHRQDVNSRTDYGQNVN
NRDDYNKNGYEQTYYNRNNQGRNGYPNTYNREGQTGYDQSSYDRDNQSRRTQDERYNLHY
NHQEDYYSKQQEHGYPSSYSVYPAPGASKNCSGSNCCFPKCFAEKGSRGPPGLMGPVGPK
GERGFPGAEGFVGPKGDKGDPGPQGQRGIRGERGKMGLPGHPGQNGVPGIMGAPGPSGIP
GRDGCNGTDGIPGHQGFPGEPGPRGLPGSVGSKGDKGEAGHCGRLLVGQKGEPGIDGVQG
SRGIPGPQGPPGYPGQKGETGPMGLTGPPGNKGEKGNMGVGFEGSKGDKGQKGEVGLPGE
NSLYPFSSNPQETVGPVGLTGAKGDKGDIGPPGLKGEPGNVGDIGLPGFNGPKGERGLPG
APGIRGRDGYSGPPGPPGRKGDRGYDGVDGLPGPSGLKGDTGPAGLPGIPGLRGPPGPPG
GGKGQPGPPGEKGPRGYPGPIGIRGADGLPGIPGPRGPVGPAGGPGLPGIPGSEGPPGEK
GDKGDAGLNGFPGEVGPRGFTGAIGPPGLRGPQGEKGLSIVGPSGMDGVPGRDGSKGQKG
EKGYTGPRGRPGDSLEGIPGPPGKPGLPGEPGLPGKDGMFGFQGPMGEKGDSGGKCSQCF
PGIKGAKGDRGIDGKDGFPGARGPPGERGFPGEPGLDGLPGPTGPPGNRGNDGTPGAPGP
QGESGKDCLISKEQLNTEKGQKGERGELGRPGPFGPIGPVGEKGVQGSTGFPGLKGDKGD
AGFPGQDGIPGRPGISGSKGETGLSIKGDQGERGRDGFSGQKGEPGFPGMKGDAGICPPL
NIEHVSKGPAGDRGPKGEPGNPGYDGEKGDRGYPGDIGLPGPPGLLGVPGPVGPRGLPGP
RGEKGNTGPIGFPGEPGLVGQRGFPGLPGLKGHKGEAGISVKGIQGLQGPQGPKGDMGLP
GPEGKEGPIGHSGLPGLTGEKGELGEPGYNGIPGKPGDKGDTGPLGPPGPPGIMGTPGTD
GLKGEQGIPGEPGRTGLTGLPGPKGDMGVPGIDGPKGFSGRRGPPGLQGRPGIDGAPGVK
GERGEKGFQGFPGMPGIDGKPGKPGEQGPKGDIGYPGEPGPMGPLGAPGDKGDLGDRGFT
GQKGDPGQVSEKGQKGEPGMPGIRGPPGLTGRDGIDGEKGEAGLPGYGRDGLPGEKGEPG
LPGRDGISGEKGMKGDIGFRGYPGLKGEKGFIGPQGEPGLPGLDGVDGEKGDIGPQGIAG
FPGLDGEVGPPGRPGFDGPKGELGPAGFEGPIGYPGVPGEKGHRGPPGLTINVKGEKGEP
GLPGYPGRDGEKGDIGFPGPAGPPGEKGDKGGIGMPGYPGPHGLQGIKGDRGPIGFTGPP
GKTVKGDKGLPGSVARPGRDGIPGLPGIKGDMGLPGLPGIKGEPGLPGPLGPPGPKGDMG
LPGPVGPPGKDGSPGLEGLPGLTGDKGYKGEPGQPGLFGAPGQKGDRGFPGREGKDGIPG
EKGDRGWDGVPGLRGPPGEKGDPGLPGYDGKMGIDGITGPKGDKGDACLALPMGKGEKGD
RGFPGPMGAPGMLGEKGNHGLPGLPGLDGQKGEPGLPGSIGPPGLRGNPGLLGPPGPQGL
TGPPGIPGVPGEPGLPCETQPDYLTGILLVKHSQSKFVPECEKGHIKLWDGYSLLYTDGD
ERAHSQDLGYSGSCVRKFSTMPFLFCDVNSVCHYASRNDRSYWLSTNSPIPMMPVEEHHI
EEYISRCVVCEVPANVLAVHSQSLNIPECPEGWSGLWIGYSFVMHTGAGSQGGGQSLSSP
GSCLEDFRATPFIECNGAKGHCHYYANEFSFWMATIEDRDQFQKPEKQTLKAGNLRSRIS
RCQVCLKNT
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atgatccggcagacatggcgcttcgtcgccgtttttgtatcgtgcttggtcatcatcgca
gaagggcggaccccacaattcctaaataggacatggcctgaaaccggggaagcatcacaa
cgtggtgatttaccaggtatacttttcgatgacaaagacgatgtctacgacgaagaaaat
tacccagatgaatattcaacacggtcatctacacgaaatgaaaatgaggttcatcgaaat
tatgacgatgaagaaaatactgatattaactggaatgattataaaggatataaaccaaac
gttaatgaaggtcatcgtcaagatgtaaattcacgaactgattatggccaaaatgtcaat
aacagagatgattataacaaaaatggctatgaacaaacctattacaatcgaaataatcaa
ggaagaaatggttatccaaatacctacaatcgcgaaggtcaaactggttacgatcaaagc
agctatgatcgagataatcaatcaagaagaactcaagatgaacgttataatcttcactat
aatcatcaagaagactactatagtaaacaacaagaacatggctatccaagcagttactcg
gtatatccagcccctggtgcaagtaaaaattgctccggaagcaattgttgtttccccaaa
tgtttcgctgaaaaaggatcgagaggacctcctggattgatgggacctgtcggacctaaa
ggtgaacgtggttttccaggggctgagggattcgtaggacccaaaggagacaaaggagac
cctggtccccagggacagcgaggcatacgaggtgaaaggggaaaaatgggtctgcccggt
catccaggtcagaacggtgttcctggaattatgggtgctccgggtccctctggtattccc
ggtagagacgggtgcaacggaacagatggcataccagggcatcaaggttttcccggtgag
ccagggcccagaggtctaccaggttctgtaggctcaaaaggagataaaggagaagcaggt
cactgtggtcggttgctcgttggtcaaaaaggtgagcctggaattgatggagtacaagga
tcccgaggtattccaggccctcaaggtcctcctggttatccaggacaaaaaggcgaaaca
gggccaatgggtttgaccggaccaccgggtaataagggagaaaaaggaaacatgggtgtt
ggtttcgaaggatctaaaggagataagggacaaaaaggagaagttggattgccgggtgaa
aattctttgtatcctttttcatcgaatccccaagaaactgttggtcctgttggacttacg
ggagccaaaggagataagggtgatattggacctccaggtcttaaaggagaaccaggaaat
gttggagacataggtttgccagggtttaatggtcctaaaggtgaaaggggtctccccgga
gcgcctggaatacggggtcgtgatggctattccggccctccaggaccacctggtcgtaaa
ggagacagaggctatgatggagtcgatgggttgcctggaccatcaggattaaaaggtgat
acaggtccagctggattacctggaataccgggtctaagaggtcctccaggacctccagga
ggtggaaaaggacaacctggtccacctggcgaaaaaggacctcgaggatacccgggacct
attggtataagaggagcagatggattaccaggaatacctggtccacgagggcccgttgga
ccagctggaggtcctggtttaccgggaattcctgggtcagaaggtccaccaggtgaaaag
ggtgacaaaggtgacgctggtctaaatggttttcctggcgaagtaggaccccgaggattc
acgggagctataggacctccaggacttaggggccctcaaggagaaaagggtctttctatt
gttggtccgtcgggtatggatggtgtacctggaagagatggaagtaagggtcaaaaagga
gaaaaaggctacacaggtcctcgaggtagacctggtgattcgttagaaggaatacctggg
cctccaggaaaaccaggtcttccaggagaaccaggtttaccaggaaaagatggaatgttt
ggttttcaaggaccaatgggagaaaaaggagacagtggtggaaaatgttcacaatgtttc
ccaggaatcaaaggtgctaaaggagatcgaggcatcgatggcaaagatggatttccaggt
gctcgaggaccccctggagaaagaggatttcctggtgagcctggtcttgatggtcttccg
ggacctacaggtcctccaggaaataggggtaatgatggtacacctggcgcacctggtcct
caaggagagtctggaaaagactgtcttattagcaaagaacagctcaatacggagaaaggg
caaaaaggtgaacgaggagaattgggtaggcctgggccgtttggacctattggtccagta
ggtgaaaagggtgtgcaaggaagtacagggtttccaggtctaaaaggagataagggtgat
gctggtttccctggacaagatggtatacccggtcgacctggtatatcaggcagcaagggt
gaaacgggattgagtatcaaaggtgatcaaggtgaaagaggtcgtgatgggttctcaggt
caaaaaggagaaccaggttttcctggaatgaaaggagatgcaggaatatgtccaccttta
aatattgaacatgtatcgaaaggacctgctggagatagaggtcctaaaggtgaaccagga
aatcctgggtatgatggcgaaaaaggtgatcgaggttacccgggtgacataggattgcca
ggaccaccaggtttactcggagttcctggaccagtcggtccaagaggtttgccaggccct
agaggagaaaaaggaaacacaggaccaataggatttccgggagagccaggtctggttggt
caaagaggtttcccaggtttaccaggcctgaaaggtcataaaggagaagctggtatatcg
gtcaagggaattcaaggattacagggtcctcaaggtcccaaaggtgatatgggtttgcca
ggcccagaaggaaaggaaggacccattggtcattcaggtttacctggattgacgggagaa
aagggagaattgggagagcctggatacaatggtattccaggaaaacctggagataaagga
gatactggaccactgggtccaccagggcctccaggaataatgggaacaccaggaacggat
ggtttaaaaggagaacaaggtatacctggagaacctggaagaactggtttaacgggttta
cctggtccaaagggagatatgggagtgcctggaattgatggaccgaaaggcttttcagga
agaagagggccacctggtttacaaggacgtcctggtattgatggagcaccgggtgtaaaa
ggagagcgaggagaaaaaggattccaaggtttcccaggtatgcctggaatagatggaaag
ccaggaaaaccaggagaacaaggacctaaaggtgatataggataccctggtgaacctggt
ccaatgggaccgcttggagcacctggagacaaaggagatcttggtgaccgaggtttcacg
ggtcaaaaaggtgatcctggtcaagtttcagaaaaaggtcagaaaggcgaaccaggaatg
ccaggtataagaggaccaccaggtttgactggtcgagatggtattgatggagaaaaagga
gaagcgggtctgcctggatatggtcgcgatgggctccctggtgaaaaaggtgagcctggc
ttacctggaagagatggtatctcaggtgaaaaaggaatgaaaggcgatatcggtttccgt
ggttacccaggtctcaaaggcgaaaaaggtttcattggaccccaaggagagcctggcctg
cctggattagatggagtagatggtgaaaagggagatattggccctcaaggtattgcaggc
tttcctggattagacggcgaagtaggtccaccaggacgtccaggattcgatggaccaaaa
ggagagcttggacctgcaggttttgaaggcccaataggatatcctggagtacccggagaa
aaaggacatagaggaccacctggtcttaccatcaatgtaaagggagaaaaaggtgaacct
ggattaccaggttacccaggtcgagacggggaaaaaggtgatatcggattccctggtcca
gctggacctcctggagaaaaaggtgacaagggtggtattggcatgcctggatatccagga
ccgcacggacttcaaggaatcaaaggtgatcgaggacctataggttttactgggcctcct
ggtaaaacagtgaagggagacaaaggcttaccaggttcagttgcaaggccaggtcgagat
ggaattccaggcttaccaggtataaaaggtgacatgggattacctggtttaccaggtatc
aaaggagagcctggactaccgggtcctttaggtcctcctggtcctaaaggcgatatggga
ctaccgggtcctgtaggacccccaggaaaagatggcagtcctggactcgaaggattacca
ggtttaacaggtgacaaaggttacaagggagaacctggtcaacccggtctgtttggagct
cctggtcaaaaaggagacagaggattcccaggtcgagaaggcaaggatggaataccggga
gaaaaaggtgatcgaggttgggatggagttccaggcttacgaggtcctccaggagaaaaa
ggtgatcctggcttaccaggctatgacggaaagatgggtatagatggtattacgggtccg
aaaggtgataaaggcgatgcatgcttagcattaccgatgggcaaaggtgaaaagggtgac
cgtggattcccaggacctatgggagctccaggaatgttgggtgaaaagggtaaccacgga
cttcctggattaccaggattagacggacagaaaggtgaaccgggtctacctggatcgata
ggacctcccggcttacgaggaaatcctggtttactgggtcctccaggaccgcaaggtttg
acaggaccaccaggtattcctggagttccaggtgaaccaggccttccgtgtgaaacacaa
ccagattacctgactggaatattactcgttaaacacagtcaaagtaaattcgtgcctgaa
tgtgaaaaaggacatataaaattatgggatggatattcgttactttacactgatggagat
gaaagagctcactctcaagatttaggttactctggttcttgtgtacggaaattctctacg
atgccattcttgttttgtgacgtaaatagtgtatgccactatgcaagtcgaaatgatcgg
tcttattggttatcaacaaatagccccatacctatgatgccagtcgaggaacatcatata
gaagaatatatatctagatgtgtcgtttgtgaagttcctgctaatgtattggcagtacat
agtcaatctttgaacattcctgagtgccctgagggatggtcaggtctctggattggatat
agttttgtcatgcacactggtgctggttcgcaaggtggtgggcaatcgttatctagtcct
ggttcgtgtctcgaagacttcagagcgactccatttatcgaatgcaatggagctaaagga
cattgccattactacgccaacgaattcagtttttggatggctacgatagaagatcgtgat
caattccaaaaacctgaaaagcagaccctcaaagcgggaaatctacgttctcgaataagt
cgttgccaagtgtgtttgaaaaatacgtaa
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integrated database retrieval system
