Trichogramma pretiosum: 106654894
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Entry
106654894 CDS
T07644
Name
(RefSeq) transcription elongation factor SPT5-like
KO
K15172
transcription elongation factor SPT5
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106654894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpre03021
]
106654894
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106654894
Transcription machinery [BR:
tpre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
106654894
RNA polymerase I system
106654894
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
106654894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
Spt5-NGN
KOW7_SPT5
KOW
KOWx_SPT5
KOW2_Spt5
KOW6_SPT5
KOW1_SPT5
GPKOW_C
VipD-like_C
Motif
Other DBs
NCBI-GeneID:
106654894
NCBI-ProteinID:
XP_014230506
LinkDB
All DBs
Position
Unknown
AA seq
1076 aa
AA seq
DB search
MKFNINDCVIVTHFDPKDEVKIKAKGPFKNNTGSIITYRNEETDVAPHNISFTVRIKTMD
LEIINSKVRKKFYGKIVKIENHNITVQDLKNNQTTYDEKYIHLDENRFAECVVPIPSNIN
ENKNNVKHDEGKKLKKIVEVIQKDKKTKDYINEEINLIEEKRNINHFSDGDVSEWVRQLE
NKYQEGPKVSDTTSPQLSLLPQFTDPNLWMVKCRIGEERATALLLMRKCLTRQFTSEPIQ
IKSVVAPDGVKGYVYIEAYKQPHVKAAIENVGNLRMGHWKQQMVPIKEMTDVLRVIKEQT
GLKAKQWVRLKRGIYKDDIAQIDYVDLSQNQVHLKLLPRIDYTRPRGALRTAQSESEAMK
RNKKKRPAAKPFDPEAIRSIGGEVTSDDDFLIFEESRYSRKGFLYKNFTMSAVLTEGIKP
TLSELEKFEETPEGVDLELSGAPVTGVSSGKDEGAGASGHSFSAGDNVEVKEGELMNLQG
KVVSVDGNTITVMPKHEELTEALMFTEYELKKSFTMGDHVKVVAGRYEGDTGFVLQVEPN
RVVLFSDLSMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDPQTVGVIVRLERENF
HILSMHGKVVEARPQGLTKRKENRNTVALDSQQNSIHKKDIVKVVDGPHSGRGGEIKHLY
RSFAFLHSRMFIDNGGIFVCKTCHLQLAGGGKRNNVVSSAQVTCGFMSPRITSPMHPAAS
GGGSTPGARGRGGRGGRGRGGHIGARRDRDLIGSHIANVGVPTKEGGFSSYSRTPSYGAG
GQTPMYSGGNKTPMHGGATPMYETGSRTPHYGSMTPSHDDGSRTPGRTGAWDPTVTNTTA
RDENFDNYSMDDGGASPGYVPNYPQSGPFTPQKPGTMYGSEQSFGPYQTSPSPAASANPS
PSQAAYSTSTPSPAGTGYIPTVAPFYTSASPMSFSPMTPGGAASPYNPQTPGSSMGDSNQ
AFVSYTSDWPSVDLEVRVRDDYSDKGLAGQQGYITAITDAMVTMYLPFKDKSVNMYYDAI
EPVVPSRNDRIRVILGGNRDSTGTLLAIDGTDGIIKSSSGEVEMLNLRCLCKVRSN
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaacattaatgattgcgtaatagtcacacatttcgacccaaaagacgaggtt
aaaatcaaagcgaagggtccattcaagaataacactggctccatcataacctaccgaaat
gaggaaactgacgtagcccctcataacatcagtttcacggtccgcataaaaacgatggat
ttagaaatcattaattcaaaagtacgaaaaaaattttacggaaagattgtgaaaatagaa
aaccacaatataacagtccaagatttgaaaaataaccagacgacatacgacgaaaaatac
atacatcttgatgaaaatcgatttgccgaatgtgtagtacccattccatcaaacataaat
gaaaacaaaaacaatgtgaagcatgatgaaggcaaaaaactaaaaaaaatagttgaagta
atccaaaaagataaaaaaacaaaggattacataaacgaggaaataaacctgatagaggaa
aaacgaaacattaatcatttttcagatggggacgtaagtgaatgggttcgtcaattagaa
aataaatatcaagaaggaccgaaagtgagtgatacaacttcaccacagttatcgttattg
ccacaatttacagatccaaatttatggatggtgaaatgtcgtattggagaagaaagagca
acagctctgcttctgatgagaaaatgtttaactcgtcagtttacaagcgaacctattcaa
attaagtctgtagtggcaccagatggtgtaaaaggatatgtttacatagaagcttacaaa
caacctcacgtaaaagctgccatagaaaatgttggaaatttacgaatggggcattggaaa
cagcaaatggttccaataaaagaaatgactgatgttttacgtgttataaaagagcaaact
ggacttaaagcaaaacagtgggttaggcttaagagaggcatttacaaagacgacattgcc
caaattgattatgtggatttgtctcaaaatcaagtacatcttaaattactaccgagaatc
gattacaccagacccagaggtgctctaagaacagctcaaagtgaaagtgaagcaatgaaa
aggaacaagaaaaaaagacctgctgcaaaaccatttgatccagaagccatccgatctatc
ggtggtgaagttacaagtgacgatgattttttaattttcgaagagagccgatacagtcgc
aagggatttttgtacaaaaattttacaatgagtgcagtgctcacagaaggtataaaaccc
actctatcagaacttgaaaagtttgaagaaacccctgagggtgtcgacttagaacttagt
ggagctccagttactggtgtatcgtctggtaaagatgaaggtgcaggagcatcgggtcac
agtttcagcgccggtgataacgtcgaagttaaggagggtgaattgatgaatttacaaggt
aaagtcgtatccgtcgatggaaacacgatcacggtcatgccgaagcatgaggagctcacg
gaagccttgatgttcaccgaatatgaattaaaaaaatccttcaccatgggcgatcacgtt
aaagttgtagcaggtcgatacgaaggagacaccggttttgtcctgcaagttgagccgaat
cgagtcgtgctattttccgatttgtccatgcacgagctcgaggtcttacccagagatctt
cagctgtgctccgacatggccaccggcgtggacagtttaggtcaattccagtggggcgat
ctcgtacaactagatccacaaaccgtcggcgtgatcgtacgcttggagcgcgaaaacttt
cacatcttgtcgatgcacggaaaagtcgtcgaagccagaccgcaaggtcttaccaagaga
aaggagaaccgaaatacagttgcgttggattcgcaacaaaacagcatccacaagaaagac
atcgtcaaagtggtcgacggaccccattccgggagaggcggcgaaatcaagcatctgtat
agaagtttcgcgttcctgcactcaagaatgttcatcgataacggtggtatatttgtatgt
aaaacctgccatctgcaactggccggcggaggcaaacggaacaatgtcgtttcctcggcg
caggtcacctgtggcttcatgtcacccagaatcacgtcgcccatgcatcctgcagctagc
ggcggtggatcgactcccggcgctcgcggtagaggcggcagaggcggacgaggtcgtggc
ggacacatcggtgctcgtcgcgatcgcgacctcatcggttctcatattgccaatgttgga
gtaccaacgaaggagggcggcttcagcagctacagccgtaccccgtcctacggtgcaggt
ggacaaacgccaatgtactccgggggcaacaaaactcccatgcacggaggagccacccct
atgtacgagactggctcgcgtacacctcattacggctcgatgacgccctcgcacgacgac
ggatcacgcacccccggtcgtaccggcgcctgggatccgaccgtcaccaacaccacggct
cgcgacgagaacttcgacaactacagcatggatgacggtggagcgtcaccgggctacgtt
cccaactatccgcagtcaggacctttcacaccccagaaacctggaaccatgtacggcagt
gagcaaagcttcggaccctatcaaactagccctagtcctgctgctagcgccaatcctagc
ccgagccaggcagcctacagcaccagcacaccgtcaccggctggaacaggctacatcccc
accgtagccccgttttatacttctgcctcgccgatgagcttcagtccaatgacacctggt
ggagcggctagcccgtacaatccgcaaacgcccggatccagcatgggcgactcgaatcag
gcctttgtctcctacacttctgattggccgtcggtcgatctcgaggtccgcgtgcgcgac
gactactctgacaaaggattggccggacagcagggatatatcactgctattacggacgct
atggtgaccatgtatttacccttcaaagacaaatccgttaatatgtattacgatgcaatc
gagcctgttgtgccgtcgcgaaatgatcgcatccgtgtgattttggggggaaaccgcgac
tcgacgggtacacttttggcaattgacggtaccgatggaataataaaatcttccagcgga
gaagttgaaatgttgaatcttagatgcttgtgtaaagtacgttcgaattaa
DBGET
integrated database retrieval system
