Trichogramma pretiosum: 106654928
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Entry
106654928 CDS
T07644
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
tpre
Trichogramma pretiosum
Pathway
tpre04512
ECM-receptor interaction
tpre04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106654928
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106654928
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpre04147
]
106654928
00536 Glycosaminoglycan binding proteins [BR:
tpre00536
]
106654928
Exosome [BR:
tpre04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106654928
Glycosaminoglycan binding proteins [BR:
tpre00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106654928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106654928
NCBI-ProteinID:
XP_014230565
LinkDB
All DBs
Position
Unknown
AA seq
1848 aa
AA seq
DB search
MRYYSIVTFCSLLLLATVFLRSPVHAINCQNYKCNCTGIKGNLGHAGIPGIHGPQGEPGD
TGPDGPEGSKGEKGQYGELGLMGEKGLRGEQGFQGFVGRPGESGRAGLTGPPGPDGLDGC
NGTDGRPGIPGYPGLHGQRGLFGPPGLKGPPGDAGDGGVNTVGVKGIRGEPGLDGRPGVQ
GSLGPRGDLGYSGPSGDVGPTGFQGLPGMQGDRGDDIVGWKGESGEQGDRGEKGLPATGR
SKQNDLTVRVGPPGAKGYKGDMGERGLKGEIGDKGPTGYPGRDGLKGLKGEQGDDGLRGV
QGLTGVAGPAGDKGEIGDEGFSAGIGPVGPKGVMGDAGQQGPPGRQGAPGEPGEYIPELD
EIIVGSIGIQGDVGLPGDPGPSGTPGEAGRVGYVGPPGFPGPQGPSGRPGPKGTSIKGER
GDDGTPGPMGYQGPIGYPGPIGPTGEKGFPGITITGPPGLDGYPGMDGIDGLLGDRGEPG
DAGPKGFPGVGTPIEGPTGEAGLPGLPGVPGTPGRRGADGAKGFKGPKGDDCGICTSGAP
GAKGDSGSPGFDGYPGAPGFAGLPGPRGYKGEMGQMGMVGAPGIPGENGIPGMVGVQGPK
GMSGRIVLPGSIHTMSPPGDFGDKGYPGPPGPPGFRGPPGPVGDYGFDGPKGNKGDYGVP
GIPGRDGQPGWDGYPGIKGDAAIGSKYELKGDQGFNGFPGQKGERGNPGQKGWRGDSSQH
NLLPFKGDRGPKGYAGENGLDGLKGIRGDTGRQGLPGKVGEQGPAGLSAQGPEGLKGYPG
IPGDEGFRGNPGTPGIQGPEGYPGLAGIKGDRGEMGNIYNYGDIGEMGPKGDTGDIGLAG
VPGFRGLPGPEGFKGRKGDKGERGYYGFDGTPGAKGPRGDSIQGHRGEPGMPGQPGRPGM
IGDVGLKGTNGLPGFDGLKGIRGDIGLPGNRGPEGDVGPVGFVGMDGHMGFIGIPGEDGD
AGEAGDDGVQGLPGLDGESGLLGIKGERGERGFAGLQGPPGPTGWHGLKGNRGPPGFKGE
RGENSFSGPQGDLGEPGYQGEQGPPGLPGVDGRPGMIGNPGLSINGAIGIKGEVGQPGYD
GYNYTIGEKGDQGDMGPPGFDGEKGEEGQKGYVGLAGAPGRSGFKGSRGSIGPPGIDGEK
GKCGLEGDPGLIGHPGMPGDIGPPGLRGRRGPQGPKGPQGDTGFTGYANATRGDAGTPGL
SGLPGKKGVRGDSGFYGPPGLKGERGDLGLRGPNGTMGTMGLPGMPGDIGPVGPPGPPGE
LAETGDDGEPGIHGLDGIPGRPGLKGLSGDYGLDGPDGIQGEPGYSYPGPKGMRGDEGLP
GYYGYPGQPGLEGKPGITGPRGPKGHQGEPGYSATAQKGEMGDYGLPGLDGRPGLKGPRG
QDGTPGLMGLYGLKGEHGDFGAPGLPGLPGAPGRQGQKGERGTYFEQRVEKGNMGEPGLK
GYPGLRGMPGLIGEPGEDGFPGRFGEPGIPGRPGPPGKVGPDGPDGLEGPMGMTGFQGKP
GEPGQPGLPAISRPRPQNRGFYFARHSQSTMIPQCPKNTIKMWDGFSLLHITGNAYAHSQ
DLGVPGSCMRKFSVMPFIFCNLNNVCDYANRNDYSYWLSSNEQMPMSMTPIPAREAGPYI
SRCVVCEAPTRLIVTHSQSMSIPKCPGGWEELWAGYSFLMHRDAGSVGGGQSLSSAGSCL
EEFRARPFIECRGQGSCNFFSTAISYWLSTIHDNEMFRKPQQQTLKMDHTLRVSRCTVCL
RRHIPNERDRGGIGGSRWPPKGGAFRHDGAPQQPTVSLHPDNVNNEIGQYEQQQRGYENS
NDWRSLYHPGENNYQSYRRNPNTRTRNPPYRQYKPQSDYQNSRLQQKP
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgcgttactattcgatcgtaactttttgctctctgctcttacttgccactgtttttctt
cgctcgccggtgcacgcaatcaactgtcaaaattacaaatgcaactgcacgggtatcaaa
ggcaatctaggccatgcggggattccaggaattcatggacctcaaggagagccaggcgac
acaggccctgatggaccggaaggttccaagggcgaaaaaggtcaatatggagaattggga
ctcatgggagaaaaaggtcttagaggcgaacaagggtttcaagggtttgttgggcgacct
ggtgaatctggaagagcaggactcacgggaccacctggaccggatggacttgacggttgt
aacggcacagatggtcgtcccggtataccaggttacccaggtcttcatggtcaacgcggc
ctttttggtcctccgggattgaaggggcctccaggagatgccggagatggtggcgttaat
accgtaggagtcaagggtattcgaggtgaacctggtcttgatggtcgaccgggtgttcaa
ggctctctcggacctcgaggcgatctaggctattctggaccttccggtgatgttggtcca
acaggattccagggtttacctggcatgcaaggtgaccgtggtgatgatatagtcggatgg
aaaggtgaatctggcgagcaaggagatcgcggcgaaaaaggtttacccgctactggtaga
agtaaacaaaatgatcttaccgtgcgagttggtccaccgggtgcaaagggatataaaggc
gacatgggtgaacgaggcttgaagggagaaattggagataaaggtcctaccggctatcct
ggtcgagacggtttgaaaggattaaaaggtgagcaaggtgacgatggtcttagaggagtc
caaggcttaaccggagtcgctggtccagcgggagataaaggcgaaataggagatgaaggt
ttttctgctggcataggtcctgtgggaccaaaaggtgtgatgggtgatgcagggcagcaa
ggtccacctggtcgacaaggtgctcctggagaaccaggagaatatattccagaattagac
gaaataatcgtaggaagtattggcattcaaggcgacgttggcttgcccggagaccctgga
ccatctggaacgccaggggaagcaggaagagttggttatgttggaccacctgggtttcct
ggtccacaaggaccttcaggtagacccggaccaaaaggaacttcgattaaaggagaaaga
ggagatgatggaacccctggaccaatgggatatcaagggccaataggttatccaggacca
ataggaccaacaggagaaaaaggatttcctggtatcacaataactggacctccaggatta
gatggatatcccggcatggatggaatagatggattattgggagaccgtggcgagccaggc
gatgcaggtccaaaaggatttccaggagtaggtacgccaattgaaggtccaacaggtgaa
gcaggattgccaggtttacctggtgtaccgggtactccaggccgaagaggtgcagatgga
gctaaaggctttaaaggacctaagggtgacgattgcggaatatgtacttctggtgctcct
ggtgcaaaaggagattccggctcaccaggcttcgatggttatcctggagcgccgggattc
gccggtcttccaggtccacgtggttacaaaggtgaaatgggacagatgggcatggtcgga
gctcctggaattcctggagagaatggaatacctggaatggttggcgtacaaggaccaaaa
ggaatgtcaggcagaatagttttgcctggctccattcatactatgtcccctcctggagat
tttggtgacaaaggttatccaggtccgccaggtcctcctggtttcagaggcccacctgga
ccggtgggagattatggatttgatggacctaaaggaaataagggagactatggagtacct
ggaataccgggtcgcgatggacaacccggttgggatggttatcctggtatcaaaggagac
gctgccataggtagtaaatatgaactcaaaggagatcaaggcttcaatggctttcctgga
caaaaaggagaaagaggcaatcctggtcaaaaaggttggcgaggagactcttctcaacat
aatttactacctttcaaaggagatcgtggtcctaaaggatatgctggtgaaaatgggctt
gatggattaaagggtataagaggtgacaccggtagacaaggcttaccaggaaaagttggt
gagcaaggtccagcaggattatcggctcaaggccccgaaggtctaaaaggttatccagga
atacctggagatgagggcttccggggtaatccaggaactccaggaattcaaggacctgaa
gggtatccaggtctagcaggaataaaaggagatcggggtgaaatgggaaatatctataat
tacggtgatatcggagaaatgggaccaaaaggagatacaggcgatataggacttgctgga
gtaccaggtttccgtggtctacctggccccgaaggtttcaaaggtcgcaaaggagataaa
ggagagagaggctattatggcttcgatggtactcctggtgcaaaaggccctcggggagac
agtattcaaggtcatagaggagaaccaggaatgccaggacaacctggaagaccaggaatg
atcggtgacgttggattgaaaggtaccaatggtctaccgggtttcgatggattaaaggga
atacgaggagatattggcctaccaggaaatcgaggaccagaaggagatgtaggtcctgta
ggatttgtaggaatggatggtcacatgggcttcattggaattcctggagaagatggagat
gccggtgaagctggagatgatggtgttcaaggtttacctggattagatggagaatctggt
cttttgggaataaaaggtgaaaggggtgaaagaggttttgctggccttcaaggaccaccc
ggtccgacaggttggcatggattaaaaggaaatagaggacctcctgggttcaaaggagaa
cgaggcgaaaattcatttagtggacctcaaggagatttgggagaacctggttatcaaggc
gaacaaggaccgcctggattacctggagttgacggacgacctggtatgattggaaaccct
ggtttatctataaatggcgctatcggcattaagggtgaagtagggcaacctggatatgat
ggttacaattatacaattggagaaaaaggcgatcaaggtgatatgggaccgcccggattc
gatggtgaaaaaggagaagaaggtcaaaaaggttatgtagggcttgctggtgctccagga
cgatcaggtttcaaaggcagccgaggttcaattggaccaccaggaattgatggcgaaaaa
ggaaaatgtggtcttgaaggtgatccaggattgattgggcatccaggaatgcctggtgat
attggaccgcctgggttacgaggtcgtcgtggtccacaaggaccaaaaggaccgcaaggt
gacactggttttactggttatgctaatgcaacgcggggtgatgctggtaccccaggactg
agtggtttaccaggaaaaaaaggggtcagaggagattctggcttttatggacctcctgga
ctaaagggtgaacggggagacttgggattaagaggtcctaatggaaccatgggaacgatg
ggcttaccaggtatgcccggtgacataggtcctgttggaccacctggtccaccaggagag
ttggctgaaacaggtgacgatggagaacctggcattcatggattagatggaataccaggc
cgccctggattaaaagggttatccggagattacggattagatggtccagatggtattcag
ggtgaaccaggatatagctatcctggtccaaaaggaatgcgaggagatgaaggattacct
ggatattatggttatcctggtcagcctggtttagaaggaaaaccaggtattacgggacca
aggggaccaaaaggtcatcagggagagccaggttattcagcaactgcacagaaaggtgaa
atgggtgactacggattacctggtttagatggcagacctggtttgaaaggcccacgtgga
caagatggtacaccgggattaatgggattatatggtttgaagggagagcatggtgatttc
ggagcacctggattgccaggtttaccaggtgcaccaggtcgacagggtcaaaaaggtgaa
agaggaacatacttcgaacaaagagttgaaaaaggaaatatgggtgaacctggattaaag
ggttatccaggtctccgaggaatgccaggattgattggcgaaccaggagaagatggattc
cctggaagatttggtgagcctggaatcccgggtcgccctggtccacccggtaaagttgga
ccagatggtccagatggattagagggaccaatgggaatgactggattccaaggaaaaccc
ggtgaacctggtcaacctggacttccagccatttctagacctcgacctcaaaatcgaggc
ttctacttcgcaagacattcacaaagtacaatgatacctcagtgtcctaaaaatacaata
aagatgtgggatggattttcgctgttgcatattacaggaaatgcctatgctcattcacaa
gatcttggtgtacccggaagctgcatgcgtaaattctcggtaatgccgttcatattctgc
aatctcaacaacgtgtgcgactacgcgaatcgcaacgactacagttactggctcagctcg
aacgagcagatgccgatgtcgatgacaccgattccagctcgcgaagccggtccctacata
tctcgctgcgtcgtctgcgaggcacccacgcggctgattgtcacccacagtcagagcatg
agcataccaaagtgcccgggcggctgggaggagctctgggctggatacagttttctcatg
catcgcgacgcgggttcggtaggcggaggccaatcgctgtcgtccgcgggctcctgcctc
gaggagttccgagctcgtccgttcatcgagtgtcgcggccagggctcgtgcaacttcttc
tccacggccatatcttactggctgtcgacgatccacgacaacgagatgttccgcaaaccc
cagcagcagaccctcaagatggatcacactctgcgcgtgtcgcgctgcaccgtctgcctg
cgacggcacatacccaacgagagggacaggggcggtattgggggctctcgctggcctccg
aagggaggcgctttcaggcacgacggagcaccgcagcagcccacggtgagtctgcatccg
gacaacgtcaacaacgagatcggccagtacgagcagcaacagcgaggctacgagaacagc
aacgactggcgctcgctctatcatccgggcgagaacaattatcagtcgtatcgcagaaat
ccaaatacgaggacgcgcaatcctccatatagacaatataaacctcaatccgattatcaa
aattctcggctgcaacagaagccctga
DBGET
integrated database retrieval system
