Trichogramma pretiosum: 106655183
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Entry
106655183 CDS
T07644
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03030
DNA replication
tpre03410
Base excision repair
tpre03420
Nucleotide excision repair
tpre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106655183
03410 Base excision repair
106655183
03420 Nucleotide excision repair
106655183
03430 Mismatch repair
106655183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpre03032
]
106655183
03400 DNA repair and recombination proteins [BR:
tpre03400
]
106655183
DNA replication proteins [BR:
tpre03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106655183
DNA repair and recombination proteins [BR:
tpre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106655183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
AAA
BRCT
AAA_22
AAA_30
BRCT_2
PTCB-BRCT
nSTAND3
AAA_14
RuvB_N
RNA_helicase
AAA_19
AAA_7
AAA_5
AAA_33
AAA_16
AAA_assoc_2
NPHP3_N
AAA_18
DUF1824
UVB_sens_C
AAA_17
Motif
Other DBs
NCBI-GeneID:
106655183
NCBI-ProteinID:
XP_014230916
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MPQDIRSFFARQSSSSAVTQEKSRRKPPRISDEENSSPSKVKKAKHDDKSKDKEVKSRSK
KRTIESSDEDDVKTVNVKKAKIEDSSKKVEIIEDPSSVFNKKPVKRINSTKVTKKESQKT
EAKKSSKHPTAFEDDDFDATLDQLDTSQIEDEYLNSLKDDEKEHNKSGKKDKSSPENKKS
ENSKVNKDNVHCDVKTKDSSKKISKKDPHPKLEVEKSSRITKDKKKNDEYNEIIEENIEK
KKQHAALYQNYLHRGGARNPGSKDVPEGAEQCFANLSFLITGVLESLEREEIEEIIKKYG
GKILTTVSKKLNYLIVGDQPGPSKMTKANSLGVKQIDEDEFLNLLRTLPGHKVKIDNSKI
QTNQKSPKEKIKEENKSSNTPIDSDKNESIKVNHKSPSKKIELMKISKVEIKKEELPKNL
KLDTLETASNKNLKVVETKVKIEESPQSTESNIAMVTALVEKYRPKDMKQIIGQNGDKSN
AKKLFKWLSNWYKYHGCHATEKGVKTSWKDDSGITNKAALLSGPPGVGKTTTAYVVCAQL
GLEILEFNASDTRSKKSLQDEISSILSNKTVKTLFSNTTDKSNATKPKHVLLMDEVDGMA
GNEDRGGMQELISLIKATEIPIICICNDRASQKIKSLANYTFDLRFQKPRVELIRAAMMS
LCFKEGIKITPDELSQIINSTNQDIRQVINHLSMMSASKQKSEQNYQEKLKNLKLGPWDV
IHKVFSCDEHKNMKFRDKSDLFFHDYNIAPLFVYENYPMVRPNAPRSELLARLSKASSSL
AIGDTIEKAIRSNQSWSLLPVQAVFSSVIPGTVMSGHMGVRPNFPSWLGRNSKSNKFDRL
LQELTLHIRLTTGASKESVNLDYIKMLVNSILTPLINDGENGIDQAVAVMNEYHLSREDL
DSLIELTQWPHTRDPMQTIPPKLKAAFTKAYNKSAQAFSNTGTTTKKKSARENKDDEYAD
GNDEPLSDENEEDEKIENDKLIKAKTSKAKSAPSKAKATAKTSKPSASKTAKKPSTANKK
K
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagatattcgctcattttttgccaggcaaagctcgtcatcagctgtcactcaa
gaaaaatcgcgtagaaagccgccgagaatttcagatgaagaaaattcaagcccttcgaaa
gttaaaaaagcaaagcacgatgataaaagtaaagataaagaagtaaaatcccggtccaaa
aaacgtaccatcgagtcttcagacgaagatgatgtcaaaactgtgaatgttaaaaaagct
aaaattgaagacagttctaaaaaagtagaaatcattgaggacccttcaagtgtatttaat
aagaaaccagtaaaacgtattaattctactaaagttactaaaaaagaaagccagaaaaca
gaagctaaaaaatcatcaaaacatccaactgcttttgaagatgatgattttgatgcaaca
ttagaccagctagatacctctcaaattgaagatgaatatttgaacagtctcaaagatgac
gaaaaggagcataataaaagtggaaagaaagacaaaagttcccctgaaaataaaaaaagt
gaaaattcaaaagtaaataaagataatgttcattgtgacgttaaaacaaaagattcttct
aagaagatttctaaaaaagatcctcacccaaaacttgaagttgaaaagtcaagcagaatt
acaaaggataagaaaaaaaatgacgaatacaatgagataattgaagaaaatattgaaaag
aaaaagcaacatgccgctttatatcaaaattatttgcaccgtggaggagccagaaatcct
ggttctaaagatgtccctgaaggagctgaacaatgttttgcaaatttaagttttttaata
acaggtgtacttgaatctttagaacgagaagaaatagaagaaataataaagaaatatgga
ggaaaaatactaactacggtatcgaaaaaactcaactacttgatagttggagaccagccc
ggaccatcaaaaatgaccaaagcaaatagcttaggtgtaaaacaaattgatgaagatgag
tttttaaatttactacgtactttaccaggtcataaagtgaaaatagacaatagtaaaatt
caaaccaatcaaaaaagtcctaaagaaaaaattaaagaagaaaataaatcttcaaataca
cctattgattctgataaaaatgaaagtattaaagtaaatcataagagcccatcaaaaaaa
atagaattgatgaaaatttctaaagtagagatcaaaaaagaagaattaccaaagaacctt
aaacttgatactttagaaactgcatcaaacaaaaatcttaaggtagttgaaacaaaagta
aaaattgaagaatctcctcaaagtactgaatcaaatatagctatggtgacagctttggtt
gaaaaatataggccaaaagatatgaaacagataatcggtcaaaatggtgataaaagtaat
gctaaaaaactatttaaatggctatctaattggtacaaatatcatggttgtcatgcaaca
gaaaaaggtgtaaaaacatcttggaaagatgattctggaatcaccaataaagcagctttg
ctgtcaggtccacctggtgtgggcaaaactactactgcttatgttgtctgtgcccaatta
ggattagaaattttagagtttaatgcttctgatacaagaagtaagaaatccttgcaagat
gaaatatcaagtattctttctaacaaaactgttaaaacactattttcaaatacaactgat
aaaagtaatgccacaaaaccaaagcatgtgttacttatggacgaagtagatggcatggct
ggaaatgaagatcgtggtggaatgcaagaattaatttccctcattaaggccaccgaaatt
cccataatttgcatttgtaatgatagagcaagtcaaaaaataaaatctcttgctaattat
acatttgatctaagatttcaaaagcctagagtagaactcatcagagcagcaatgatgtct
ctttgttttaaggaaggtattaaaattactccagatgaattgtcacaaattatcaattca
acaaatcaagatattagacaagtcattaatcatttatctatgatgtctgcaagcaaacaa
aaatcagaacaaaactaccaggaaaaattgaaaaacctcaaactaggaccatgggatgtc
attcacaaagttttcagttgcgacgaacataaaaacatgaagtttcgtgataaaagcgac
ttatttttccatgattacaatattgcgcctctttttgtttatgaaaattatccaatggtt
aggccaaatgctccacgttctgaacttcttgccagactgtcaaaagctagttccagttta
gctattggagatacaattgaaaaagctataagaagtaatcaatcgtggagtcttttacca
gtacaggctgtattctcttcagtaataccaggaacagtgatgtcaggtcatatgggtgtc
agacctaattttccaagctggcttggaagaaattctaagagcaataaatttgatcgactg
cttcaagaactaactttgcatattcgtttaactacaggagcaagcaaagaatcagttaac
ttagattacatcaaaatgctggttaattctatattgacacctttaattaatgatggtgaa
aatggtattgatcaagctgtagcagtaatgaatgaatatcatttatcaagagaagatttg
gattcattaatagaactcactcagtggccacataccagagatcctatgcaaactattcca
cctaaattaaaggcagcattcactaaagcatataacaaaagtgctcaagcgtttagcaat
actggtactacaacaaagaaaaagtctgctcgagaaaataaagatgatgaatatgcagat
ggaaatgatgagcctctatctgatgaaaatgaagaagatgaaaaaattgaaaatgataag
cttattaaggccaaaacttctaaagcaaaaagtgctccaagtaaagccaaggcaacggct
aaaacatcaaaaccttccgcatctaaaactgcgaaaaaaccttcaactgcaaataaaaaa
aaatga
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