Trichogramma pretiosum: 106655539
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Entry
106655539 CDS
T07644
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106655539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106655539
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
106655539
mRNA cycle factors
Common to processing body (P body) and stress granule
106655539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
FAT
Motif
Other DBs
NCBI-GeneID:
106655539
NCBI-ProteinID:
XP_014231450
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MSLKRTVDEMHREFQEVRKRIENLSESDVLSSSLWIIQRKYLYLGKMIIIIDLQYALRCM
VEQELWNYGFKHFISILQKMSKNEKNSQRSDAQCILTQILDEAYGFYLNLLDHFCLSYDL
KVPFRRNKYMGIDSENNTKTNSDENFKSLCYFICTHCLVHLGDLDRYRNQLNEAELFYRH
AQSVSPTSGHAYNQLALLDVIRSNKLGTVFHYVQAIMCQHPFGPSIPNLFRTLETIPDIN
ITNPYIELTQDELINIFLYFHKILHTNCTQNAQKRSGLVKFLNLRILAMVATNSFSSSIL
LQMFVINLFSIDYLKLCPTNDCNSKLSGEQQKAKQDILKLIVGQLDAMLLANYTITDSLI
GNNALPTIKLCFQWISTRSSILNEPAFSEHSKIWKGFCTVLNILQIVLSDSERPSFPVGY
PLPEDVLVQGFSPLEDCLKELNFTESDNNQRLDSQTEMYLRVARLIELGHSFTSHLVNGA
PLIKYVGGQFVVYNAAAEHVESYNPTIEPEVLDFTNETNQLDDRHTQGTSSDCRIIPAFN
LLSIGQESNDILRPECSSGRSVEKMPKNDDPMKIEPNHPDSAEGRIRRNLRSFKNAAIHS
ILNLQKNGQINEMTRDQDFNSGATSYHSPTKQNYENVEKRI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgaaaagaactgtggacgaaatgcaccgagagtttcaagaagttagaaaacgc
attgaaaatcttagtgaatcagatgttctctctagctcactatggatcatacaaagaaaa
tacttgtatctgggtaaaatgataattattatagatttacagtatgccttgagatgtatg
gttgaacaagagttgtggaattatggctttaaacatttcatatcaattttgcaaaagatg
tctaaaaacgaaaaaaatagtcaaagatctgatgcccaatgtattttgactcagattctc
gatgaagcttacggattctatttgaatctcttggatcacttttgtctatcttatgactta
aaagtaccatttcgccgaaataaatatatgggaatagactcggaaaacaatacaaaaacg
aattcagatgaaaatttcaaatctttatgttatttcatatgcacacactgtttagtgcac
ctaggagatttagaccgatatagaaatcaacttaatgaagcagaattattttatcgacat
gctcaatctgtttcaccaacaagtggacatgcttacaaccaattagcattattggatgta
atacgctcaaacaagcttggaactgtgtttcattatgtacaagcaattatgtgccaacat
ccatttggaccatcaatacctaatttattcagaacacttgaaactattcctgatatcaat
atcacgaatccatacatcgaacttacacaagacgaattaattaatatttttctttacttc
cacaaaattcttcacacaaattgcacacaaaatgcacagaagcgctcaggtctagtaaaa
tttttaaatttacgaatccttgcaatggtagcaacaaattctttcagtagcagtatattg
ctacaaatgtttgtcataaatttatttagtattgattacttgaaactttgtccaacaaat
gactgcaattcgaaactatctggtgaacaacagaaagctaaacaagatattcttaaatta
atagttggtcaattggatgcaatgttactcgcaaattatacgataactgacagtttaatt
ggtaacaatgccttaccaacaattaaattatgcttccaatggatttcaacaagatcttcc
attttaaatgaaccagctttttcagaacattctaagatttggaaaggattttgcaccgtt
ttaaacattttgcagattgttctgtcggattcggaacgcccttcatttccagttggttat
ccacttccagaagatgttttagtgcaaggattttccccactcgaagattgtttaaaagaa
ttaaatttcacagagtctgataataatcagaggttggattcacaaactgagatgtatctc
cgtgtcgcgcgtcttattgaacttggacatagttttacgagtcatctcgtcaatggtgct
cccttaatcaaatacgtaggtggtcagttcgttgtttataatgctgcagctgaacatgtt
gaatcctataatcctacgattgaaccagaagtactggatttcaccaatgaaacaaatcag
ttggatgataggcacactcagggtacttcatcggattgcagaatcattccagcttttaat
cttttgagtattggacaagaaagtaatgacattttaagaccagaatgttcgtcaggacgt
tctgtcgagaaaatgcctaagaacgatgacccaatgaagatagagccaaatcatccagat
tctgctgaaggtagaattcgtcgaaatcttagatctttcaaaaatgctgcgattcattcg
attttaaatctccaaaaaaatggtcaaatcaatgaaatgacaagagatcaagattttaat
agtggagctacatcttatcattctccaacgaaacaaaattacgaaaatgttgaaaaaagg
atctaa
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