Trichogramma pretiosum: 106655681
Help
Entry
106655681 CDS
T07644
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
tpre
Trichogramma pretiosum
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpre03041
]
106655681
03009 Ribosome biogenesis [BR:
tpre03009
]
106655681
Enzymes [BR:
tpre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106655681
Spliceosome [BR:
tpre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106655681
Ribosome biogenesis [BR:
tpre03009
]
Eukaryotic type
Pre-60S particles
Helicases
106655681
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
PRK
Cas3-like_C_2
Tir_receptor_C
Cas_GSU0053
Motif
Other DBs
NCBI-GeneID:
106655681
NCBI-ProteinID:
XP_014231682
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MTDLIKTIDSDQEIEDLSEPSDEEDDFQPRLKEKKKENGLGGDLVFNQEDFEHDTWNDLS
KYIKRKAKTKLDDKIKKIRNSHKEGDEPLEEPVNLDEEETDLFVAEEDLKKDTIKTKLKK
IKKGKIEEEEKVNFEEMPEYDNLASFEKLNISRPLLKAIGTMKYYNPTPIQAATIPVALL
GRDICGCAATGTGKTAAYMLPTLERLLYKPAGGTPVTRVLVLVPTRELGVQVYQVTKQLA
QYTSIEVGLSVGGLDVKIQESVLRKNPDIVIATPGRLIDHLANAPTFTLDTIEVLILDEA
DRMLDEYFAEQMKQIVKQCSRTRQTMLFSATMTEEVKDLAAVSLNKPVKVFVDSNQDVAS
ALRQEFIRIRKEREGDREAVLAALICRTFHDHTMIFVQTKKQAHRLHILLGLLGVKVGEL
HGNLTQPQRLENLRKFKDEEIDVLIATDVAARGLDISGVKTVINFVMPATLQHYIHRVGR
TARAGRGGVSVSLAGEQERQLVKEVIKQSKNPVKHRIIPPNIIDKYNKKLVSLEPDVEKI
LNEEREERELAKVENQANRIENMLKDEDNKDQRVWFQSQRERHIEKKKLQGKPEMDKSAK
PSKDKSEKRPEKKSKKPAKKLDPAEERALQELNKVAAFQARLAKKNIKPKKMRSCVDATA
PEDRAAGKKRKASSFASDLTDTSRKNVKRMRYEANTKKNQKASKSMKKAKMKGIKPKSNP
KRR
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgacagatttaataaaaacaatcgacagtgatcaggagattgaggatttatcagaaccc
tctgatgaagaagacgactttcaacctcgtttaaaagaaaaaaaaaaggagaatggttta
ggaggtgatttagttttcaaccaagaagattttgagcatgacacttggaatgatctgagc
aaatatatcaaacgtaaagccaaaactaagcttgatgacaaaatcaaaaaaataagaaat
tctcacaaagagggagatgaaccattagaagaacctgtcaatttagatgaagaagaaact
gacttgtttgtcgcagaagaagatcttaaaaaagataccattaaaactaagttgaaaaaa
ataaaaaaaggaaaaattgaagaggaagaaaaagttaattttgaagaaatgccagagtac
gacaacttggcttcatttgagaaactcaacatttctcgtccacttcttaaagcaataggc
acaatgaaatattacaatccaactcccattcaagctgcaacaatacctgttgctttactt
ggcagagatatttgtggatgtgctgcaacaggtacaggaaaaactgctgcctacatgctt
ccaactttagaaagattattgtacaaaccagctggcgggacaccagtaactagagttttg
gttcttgttcctactcgagaattgggtgttcaagtataccaagtaactaaacaattagcg
cagtatacttctattgaagtaggattatcagtaggtggtttagatgtaaaaatacaggaa
agtgttttaagaaaaaatccagatattgtaattgctactccaggacgtttgattgatcat
ttggctaatgcacctacttttactttagatactattgaagtgttgattttggatgaagct
gacagaatgttagatgaatattttgctgaacaaatgaagcaaattgtcaagcaatgctcc
agaactcgccaaaccatgctgttttcagctactatgactgaagaagtaaaagatttagct
gctgtttctcttaataaaccagtaaaagtttttgttgacagcaatcaagatgttgcatct
gctttacgacaagaatttataagaatccgtaaagaaagagaaggtgatcgagaagctgta
ctagccgccctgatatgccgtactttccatgatcacactatgatttttgtgcaaaccaaa
aaacaagcccaccgattacacattttgctaggacttctaggagttaaggtaggagaactc
catggaaatttaactcagccgcagcggttggaaaatctgcgaaaattcaaagacgaagaa
atagacgtcttgatagcgacagatgttgcggccagaggtttagatatcagtggtgtgaaa
acagtcattaattttgtaatgccagcgactttgcaacactacatccacagggttggtcga
actgcgcgagcgggtcgaggcggtgtctcggtctcattggctggtgagcaagaacgtcaa
ctggtaaaggaagtcatcaagcaatcaaaaaatccagtgaaacaccgtattataccgccc
aatattatcgacaaatacaacaaaaagcttgtctcgctagagcccgacgttgagaaaatc
ctcaacgaggagcgagaagagcgagaattagccaaggtcgaaaatcaagccaaccgcatc
gaaaacatgttgaaggacgaagacaataaagatcagcgtgtttggttccaatcacagcga
gaaaggcatatagagaaaaaaaaactgcaaggtaaaccggagatggataaatcagccaaa
ccgtcaaaagataaatctgagaaaaggcctgaaaagaaatcgaaaaaaccagcaaagaag
ttggatccagccgaagaacgagctttgcaagaattaaataaagttgcagcttttcaagcg
cgattagccaagaagaacattaaaccgaagaagatgagatcttgcgtagatgctactgct
cctgaagaccgtgctgccggcaagaagaggaaggcttcgtcctttgccagcgatttgacg
gatacgagcaggaagaacgtcaagagaatgcgatacgaagcaaataccaaaaagaaccag
aaagcgagcaaatcaatgaaaaaagctaaaatgaagggtattaaacccaagagcaatcct
aaaaggcgttaa
DBGET
integrated database retrieval system
