Trichogramma pretiosum: 106655738
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Entry
106655738 CDS
T07644
Name
(RefSeq) ATP-dependent helicase brm-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106655738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpre03021
]
106655738
03036 Chromosome and associated proteins [BR:
tpre03036
]
106655738
Transcription machinery [BR:
tpre03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106655738
Chromosome and associated proteins [BR:
tpre03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
106655738
Chromatin remodeling factors
BAF complex
106655738
PBAF complex
106655738
GBAF(ncBAF) complex
106655738
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
ResIII
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
106655738
NCBI-ProteinID:
XP_014231767
LinkDB
All DBs
Position
Unknown
AA seq
2249 aa
AA seq
DB search
MSSGRKVSRAPKQPRGGGGQAGGGGGVAAAQSQPPAVPAATTAGYNGAAANACRDAAVRR
RLNAAAGAAQQQQQPDNDDDSSSPAATNWTNSPQTNMTSSSPQPMPPPQPPGPPTNSSQP
GQMGPPPPQAPSPHSSHPHSPASGYQDQSMPPMQPGQPNNNQPQHPMAQQNPNMFPPHHP
GQPPQGYGGPPMPPMGHHQQPPPQGYAGHPHQMPPHMGMPPPPHPSHGPSQGYDGSQMQG
GPPQQQPPSQPGGYPHSGHQVPPHPQSSHPSQQHPPPPQSPHQQGPPHSHSQSPHLQGPP
HSQSPHGPGPHQQSSHMQGPPHPQSPHPQQGPPPHSQSPHPQGPHAPSPHQQMQGPHGQP
SHQQQGPPPHQQPPPHQQGPHSQGPPPHHQGPHPQGPPHLQSHHHQPPHQMPHQPPQGPP
HSGPHSDQHQGMHQPPHGLSHQQHPHQSQMPGPQYYQHHPSQGNSGGMGQGPGHPGSAPG
PQQQSTPQGGPMMGHGPSGHSGPSPSPGPGIPHPSEMRQNLGNQQQPPVGPGGPINAGGP
GGPMSSSGQMGPGGPNSSMSGSGPGGPMPPGSSMGPGGPMNVGGQGGPLGPGNHQGPMSA
GGPMNSVTPGGPMGANANNPMGPGGPMGSAGPMVSGPGGQMSSGPGGPISSGPGGPMGPS
GPLGGPNVAMSNSGPAGPMGISGPGGPMNAGVPMGPGGPMGPGGPPPMGHPSAVHQGPSS
HQGPLGHQGPPGHQGPPGHQGPPGHQGPLSHQGPPSHQGPPGHQGPPGHQGPPSHQGPPG
HQGPPGHQGPPSHQGPPGHQGPPGHQGPPSHQGPPGHQGPPGHQGPPGHQGPGHISANVQ
NGPSPAPMSGPGIMTGPGPGPGPGPGPGPGPAPLPGQGQENLHALQKVINTMEKKGLQED
PRYLQLLALRSRQSIGENSPLSPQQLQQFHAQLIAYRILLRNQPLSPQQIMAVQGQRPTE
PNQSPMGPTVPPGAPPPPHGPMGMPGFPPGPPRMGPGGPPPQMHPQQQPGPPHIQQQQQQ
QQQQQQQLQQQQQQHQQQQQQQQQQQHQQGPQAGKGIKVTTMCRPPGIDPLEILDERETR
IARNISIRIQQLSNLPPNLPDDLRSQAMTELRMLRLLDFQRQLRSEIVTSTRRDTTLETV
VNMKAYKRAKRQGLREARATEKLEKQQKLEAERKRKQKHQEFLTAVLQHGKDLKEYHRNN
MAKLARLNKAIMNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFL
LSQTDEYIGNLTEMVKQHKIEQKKKQYEEQKRKKKKKRLSMDGENGEGIDGEDVRVEVLE
TATGRTLTGDDAPLMSQLNAFLESHPGWEAVETDSEDDEEDEENDDGENNKDKNEKTANE
IVKVKKTIEKAKVEDDEYKTEEQTYYSIAHTVHESVTEQASIMVNGQLKEYQVKGLEWMV
SLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLSNWILEFEKWA
PSVVVVSYKGSPAGRRAIQSQMRATKFNVLLTTYEYIIKDKSVLAKLQWKYMIIDEGHRM
KNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAP
FATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKV
LYRHMQSKGVLLTDGSEKGKRGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCEFLGIH
GTGIITGPLLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLNWRGFMYLR
LDGTTKAEDRGDLLKKFNDPGSEYFLFILSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQ
AQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQ
FLQSILHQDDAEDEEENEVPDDETVNQMIARSEGEFESFQKLDLERRRDEAKLGPARKGR
LLEESELPEWLVKNDDEVEKCCYDEEDEKILGRGSRQRKEVDYTNSLTEKELMRAIGDDG
CEFEEEEEEDKKKKQTRKRRKKGDEDDEPIVKKRRGQSGMNPKLKRCMKKIMSAVVNYTE
SDGRELSEPFMELPSRREFPDYYEIIKKPLAINKLLQKIDEGKYTDLDELEKDFMQLCKN
AQIYNEEASLIHENSIVLQSVFTNARQKVEAEGTGSDDNKDGDDGSDAESNSRMKIKMKG
RKSEGGGRGGRRKRISKKCISDDDDADDH
NT seq
6750 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcggccgcaaagtaagtagagcgcccaagcagccgcgaggcggaggaggacag
gccggcggcggcggcggagtagccgctgcacagtcacagccaccggccgtaccagccgcg
accacggccggctacaatggagccgctgccaacgcgtgccgggatgccgctgtgcgccgt
cggctgaacgccgcggccggtgccgcgcagcagcagcagcaacccgacaatgacgacgac
tcgtcctcgcccgcggcgaccaactggaccaacagtccccagacgaacatgaccagctcg
tcgccgcagcccatgccgccaccgcagccgccggggccgcccacgaattcttcgcagcct
ggacagatgggcccgccaccaccgcaggcgccttcgccccacagcagtcacccccacagt
ccagcgtctggctaccaggatcagtcgatgccacccatgcagcctggccaaccaaataat
aaccagccacagcatcctatggcacagcaaaatccaaacatgtttccacctcatcatcct
gggcaaccgcctcaaggatatggaggtccaccgatgcctccaatgggccatcatcaacag
cctccaccacaaggctatgcaggacatcctcatcaaatgcccccacacatgggtatgcca
ccccctccacatccttcacatggtccatcacagggttacgatggatcacaaatgcaagga
ggaccaccccagcagcagcccccttcacaacctggaggataccctcactctgggcatcaa
gttcctccgcatccacaatcgtcgcacccatcgcagcagcatcctcctcccccgcaatcg
cctcatcagcaaggaccgccgcattcgcactcgcagtcgccgcatctgcaagggccacca
cattcgcagtcgccacatgggcctggccctcatcagcagtcgtcgcatatgcaaggtccg
ccacatccacagtcgcctcacccccaacaagggcctcctccacattcgcaatcgccgcat
ccgcaaggtccacatgcgccatcacctcatcagcagatgcagggaccacatgggcaacca
tcacatcaacaacagggaccaccaccccaccagcagcctcctccacaccaacagggtcca
cactctcaaggaccaccccctcatcatcaaggtcctcaccctcaaggacctccgcatttg
caatcgcaccatcaccaaccaccccatcaaatgccacaccaacctccacaagggccccca
cattcgggtccgcattccgaccaacaccaaggaatgcatcagcccccgcatggactgtca
caccaacagcacccgcatcagtctcagatgcctggtccacaatattaccagcatcatcct
tcacaaggaaatagtggaggtatgggacaaggaccgggtcatcctggttctgcaccaggg
ccgcaacagcaatctactccacaaggaggcccaatgatgggtcatgggccttctggtcat
tctggaccgtcgccttcgccaggacctggcatacctcatccatcagagatgagacaaaat
ttgggaaatcaacaacaaccacctgtaggtccaggaggtccaataaatgcaggtggccct
ggaggtcccatgagttctagtggacaaatgggtcctggaggaccaaatagttcaatgagt
ggcagtggccctggtggtccaatgcctccaggaagctctatgggacctggtgggccaatg
aacgtcggtggacaaggaggtccgctaggccctggaaatcatcaaggacctatgagtgct
ggaggacccatgaacagtgtgacaccaggaggtcctatgggtgctaatgcaaataatcct
atgggcccaggagggcctatgggatctgctggaccaatggtcagtggtcctggaggacaa
atgtcaagtggacccggtggaccaatatctagtggacctggaggacctatgggtccaagt
ggtcctctaggtggaccaaacgtcgcaatgagtaacagtggtcctgcaggtccaatgggc
atttctggcccaggtggaccaatgaatgctggtgttccaatgggccctggaggtcctatg
ggaccaggaggtcctccaccaatgggacatccaagtgcagttcatcaaggtccttcttct
catcaaggcccccttggtcatcagggaccgccaggccatcaaggaccacctggtcatcaa
ggaccgcctggccatcaaggcccccttagtcatcaaggtccgcccagtcatcagggacca
cctggtcaccaagggcctcccggacaccagggaccaccaagtcatcagggtccgcctggt
catcaaggaccgcccggccatcaagggccaccaagtcatcaaggaccgcctggccatcaa
ggaccgcccggtcatcaaggaccaccgagtcatcaagggccacccggtcatcaaggaccg
cctggccatcaaggtccaccaggacatcaagggccaggtcatatcagtgcaaatgtgcaa
aatggaccttcacccgcaccaatgtcaggtcctggtattatgactggacctggacccggc
ccaggacccggccccggtcctggtcccggacctgctccactaccaggccaaggacaagaa
aatttacacgctttacagaaagtaataaatacaatggaaaagaaaggacttcaagaagat
ccaagatatcttcaattattagcactacgatctcgccagagcataggtgaaaatagtcca
ctttctcctcagcaacttcaacagtttcatgcacagttgatagcatatcggatattgttg
cgaaatcaacctttgagtccgcaacaaataatggctgtacaaggtcaaagaccaacagaa
cctaatcaaagtccaatggggccaactgttcctccaggtgctccacctcctcctcatggg
cctatgggaatgcctggatttcccccaggtccacctaggatgggccctggcggtccaccg
ccacaaatgcatccacagcagcaaccaggtcctccacatatacagcaacagcagcagcag
caacaacagcagcaacaacaactgcaacaacaacaacaacaacatcagcagcagcaacaa
cagcagcaacagcaacaacatcagcaaggtccacaagcgggaaaaggcatcaaagtgacc
actatgtgtaggccaccaggcatcgatccactagaaatcttggatgaacgtgaaactagg
atagcccgaaatatttctatacgcattcaacagttgagcaatttaccccctaatttgcca
gacgatttacgtagtcaagccatgacggagctgcgaatgttgcgattactcgatttccaa
aggcagcttagatcggagatcgttacttcaactcgtcgagacacgactctcgaaacggtc
gtaaacatgaaagcgtataaacgcgcaaaacgacaaggtctgcgagaagctcgagcaacg
gaaaaactcgaaaagcagcaaaagctcgaagccgaaagaaaacgaaaacaaaaacaccag
gaattcttgaccgcagtattgcaacatggtaaagatttgaaagaatatcaccgaaacaat
atggctaaattggcaaggctcaataaggcaatcatgaattatcatgctaatgcggagcga
gaacagaagaaagagcaagagaggatagaaaaagaacgtatgcgtcgtctcatggccgag
gatgaagagggttacagaaaacttatcgatcaaaagaaagacaaacgtctagccttcctc
ctatcacaaactgacgagtacattggcaatctcacagaaatggttaaacaacacaagatt
gagcagaaaaagaaacaatatgaagaacaaaaacgtaagaaaaagaagaagagattatca
atggacggtgaaaatggtgaaggcattgacggtgaagacgttcgagtcgaagtccttgaa
acggcaacaggtcgcacattgaccggtgacgatgctcctctcatgagccaacttaatgca
tttctcgagtctcatcctggttgggaagccgtcgaaactgatagcgaagatgacgaagaa
gacgaagaaaatgatgacggcgaaaataacaaggataagaacgaaaagactgccaatgag
atagtgaaggtgaagaagaccattgaaaaggccaaagttgaagacgatgagtacaaaaca
gaagagcaaacttattacagtatagcccacacagttcacgagagcgttacggaacaagcc
tcgataatggttaatgggcagctcaaagaatatcaagtcaagggtctcgaatggatggta
tcactctttaataacaatctcaatggtattctcgccgacgagatgggtctcggaaaaact
atacagaccatagcccttgtgacgtatctcatggagaagaaaaaagtcaacgggcctttc
ctcattatcgttcctttgtcaacgctgtcaaattggatattagaatttgaaaaatgggcg
cccagtgtcgtcgttgtatcttataagggatctccagctggcagaagagcgatacaatcg
caaatgcgtgccactaagtttaatgtactattgactacttatgaatacattataaaagac
aaaagtgtcttagctaagctgcagtggaagtacatgatcatagacgaaggtcacagaatg
aaaaatcatcattgtaaattaactcaagttttgaatacacattatctcgcacctcatcgt
ctgttgttaaccggaacgccactgcaaaacaaactcccagagctttgggccctgttgaat
ttcttacttccatcgatcttcaagtcgtgcagtactttcgagcagtggttcaacgcacct
ttcgcgaccactggcgaaaaagtcgagcttaacgaagaagagacgatacttattattcgg
cgtttacataaagttttgcgtcctttcctgctgagacgtcttaagaaagaagtcgagtct
cagctgcctgacaaagtagagtatataattaagtgtgatatgtctggcttgcaaaaagtt
ctttataggcatatgcaaagtaaaggcgttttactgactgatggatctgagaaaggcaaa
cgtggcaaaggcggcgcgaaagccttaatgaatacaattgtacagcttcgtaaactttgt
aatcatccatttatgtttcaacatatagaagaaaaatactgtgaatttttaggtattcac
ggcaccggcattatcactgggccacttttgtaccgagcgtctggcaaatttgaattatta
gatcgtatccttcctaaactaaaggcgacgaatcatagggtactactgttctgtcaaatg
acccagctaatgacgataatggaggattatctcaattggcgaggttttatgtatttaaga
ttggacggaacgacaaaagcagaagacagaggggatcttctgaagaagtttaacgatcca
ggatcagaatatttcctatttatactgtctactagagctggagggcttggtttgaatctt
caggctgcagatactgtaattatttttgattctgactggaatcctcaccaagacttgcaa
gctcaagatagagctcatcgaattgggcagaaaaatgaagtacgagtattacgattaatg
actgtgaattctgtagaagaaagaattttggctgctgctagatataagctcaacatggac
gaaaaggtcattcaggcgggtatgtttgatcaaaagtctactggctctgagcgacagcaa
ttcctgcagagcattttacatcaagacgatgccgaggacgaagaagaaaatgaagtacca
gacgacgagactgtgaaccaaatgattgcaaggtctgaaggcgaattcgaatctttccaa
aagctcgacttggagagaaggagagacgaagccaaattaggacctgccagaaaaggacgt
ttgctcgaagaatctgaacttcccgaatggttagttaaaaacgatgacgaagttgaaaaa
tgttgttacgacgaagaagatgaaaaaattctgggaagaggttcgaggcaacgtaaagag
gttgattacacgaatagtttaacagaaaaagaactgatgagagctatcggtgatgacgga
tgtgaatttgaagaggaagaagaggaagacaaaaagaaaaagcaaacacggaaaagaaga
aagaaaggtgacgaagatgatgaacccattgttaaaaagcgaagaggtcaatcgggaatg
aatccaaaactaaaaaggtgtatgaaaaaaatcatgtcagccgtagtgaactatacagaa
tctgatggtagagaactaagtgagccatttatggaattgccgtcgcgtcgagaatttcca
gattattacgaaataatcaagaagcccctggcgatcaataaactattgcaaaagatcgac
gagggcaagtacacggacttggacgaactcgagaaggattttatgcagctttgcaaaaac
gcacaaatatacaacgaggaagcgtcgctaatccacgagaactcaattgttttgcagtct
gtttttacaaatgcacgacaaaaagtcgaggccgaaggtacgggctccgacgacaataaa
gacggtgatgatggatcagacgcagaatctaactccagaatgaagatcaaaatgaagggt
agaaaaagcgaaggcggtggccgtggaggccgaagaaagagaataagtaaaaaatgtatt
tctgatgatgatgatgcggatgatcattga
DBGET
integrated database retrieval system
