Trichogramma pretiosum: 106655773
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Entry
106655773 CDS
T07644
Name
(RefSeq) ATP-dependent helicase brm-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106655773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpre03021
]
106655773
03036 Chromosome and associated proteins [BR:
tpre03036
]
106655773
Transcription machinery [BR:
tpre03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106655773
Chromosome and associated proteins [BR:
tpre03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
106655773
Chromatin remodeling factors
BAF complex
106655773
PBAF complex
106655773
GBAF(ncBAF) complex
106655773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
SnAC
HSA
BRK
ResIII
HDA2-3
QLQ
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
106655773
NCBI-ProteinID:
XP_014231814
LinkDB
All DBs
Position
Unknown
AA seq
1523 aa
AA seq
DB search
MASPPEQLSPLTPSTSVNQDSPMGILNQQPSPVSIQQQQQQQQQLTFNVTANQQQTLTMT
LNQLTSAPQQSPSPQSFDSQSANQTSLMQQSAQPQFIQMPVMAHNNHNSVVQQPVGNLKQ
DGQIHNIQLDQNGQCDTPPLPGSSLQGQITLSTGNQSQPTSNGSSSMINGSIDSPLSNGS
SNLSNPNKKSDYQSLLKAIQVMEEKGLQEDPRYFQLLALKERHFENPVENKQSLNSQQIH
QLRAQIMAYRVLARNQPLTQSQIAAVQGIKTETSSTVNQPPNGITGPPKPGQGPPQVGIF
TKNKLAPSGKPAPVDPLVIIQERENRVASRIALRMEQLNYLPTNMPEDLRTQAQIELGML
RVLNFQRQLRSEIIACTRRDTTLETAVNVKTNKRSKRQGLREARATEKLEKQQKLEAERK
KRQKHQEFLSCVLQHSKDFKEFHRNNVARMGRINKAILTHHANAEREQKKEQERIEKERM
RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYICNLTEMVKQHKMEQKKKQVEAEKRKK
KKKRYQDGELGDGEDENSRVSVVEIATGRTLSGEDAPTVAQLNSFLESHPGWEPMESDSE
YEDDEDEDSNEEKKMRDNEAEEEEEKVKKTIQKAKVEDDEYKTEEQTYYNIAHTINETVT
QQASIMVNGKLKEYQIRGLEWMVSLFNNNLNGILADEMGLGKTIQTISLITYLMEKKRVN
GPFLIIVPLSTLSNWMLEFEKWAPSVVVVSYKGSPAGRRAIQSQMRATKFNVLLTTYEYI
IKDKSVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLASHRLLLTGTPLQNKLPELWA
LLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKE
VESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGILLTDGSEKGKRGKGGAKALMNTIVQLR
KLCNHPFMFQAIEEKYCEHKGIPGGGLISGPDLYRVSGKFELLDRILPKLKATNHRVLLF
CQMTQLMTIMEDYLNWRQFKYLRLDGTTKSEDRGDLLKKFNDPGSDYFLFILSTRAGGLG
LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKL
NMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDADDEEENEVPDDETVNQMIARSEGEFE
SFQKLDTERRQQEAAMGIRTRLLDESELPEWLTQDEEDVEKWAYEEDEDKVVFGRGSRQR
KEVDYTNSLTEKEWLEAIGEEVEGGEEEEDNDRRNKKGSRKRKRKGDEDDDLMPKKRKNL
IDPKLKKCMKKIISCVISYNDTPDGRAVSEIFMDLPPRRDFPDYYEIIKKPLCINKILQK
IDDGKYPDLDELEKDFTQLCKNAQIYNEEKSMVYENSLVLEKIFENARKKLEAKFLADKA
EREAREASHIAAVEATGSNDDTTDPSVKMRIKLKSRKSEATQSTSAPSTSRGGRRKKAAK
KFMFDDDDEDDEPVNPLVIAGDN
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtccacctgaacaactttcgccgttgacgccatccacttctgttaatcaggac
agcccaatgggtattttgaaccagcaacctagtccggtgtcgatccaacaacaacaacag
cagcagcagcaacttacttttaatgtgactgcaaatcaacagcagactttgacaatgact
ctgaatcagttgacaagtgcacctcaacaaagcccaagccctcagagttttgatagtcaa
tcagctaatcaaacctcgttgatgcaacaatcagcacagccacagttcatacagatgcct
gttatggctcacaataaccataattccgtagttcaacagcctgtgggaaatttaaaacaa
gatggacaaattcacaatattcaattagatcaaaatggacagtgcgatactccaccccta
ccaggatcatctttgcaaggtcaaattacattgagtacaggcaatcaatcacaacctaca
agcaatggttcatcctcaatgatcaatggttcaattgattctcctttatccaatggatct
tcaaacctttcaaatcctaataaaaaatcagattaccaatcattacttaaagcgattcaa
gtaatggaagaaaaaggattacaagaagatccaagatattttcaacttttagcattaaaa
gaacgtcatttcgaaaaccctgtagaaaacaagcagtcattaaacagccaacagattcat
cagctacgagctcaaataatggcatatcgagttttagcacgtaatcaacctctcactcaa
agtcaaattgctgctgtgcaaggtattaaaactgaaacaagctcaactgtaaatcaacca
ccaaatggaataacaggtccaccgaagccagggcaaggtcctccacaagtaggaattttt
acaaagaataaactagcaccttcaggtaaacccgctcctgttgatccactagtcataatt
caagaaagagaaaaccgagttgcatcaagaatagctctgcgtatggaacaactcaattac
ctgcctactaatatgcctgaagatcttcgtactcaagcccaaattgagcttggaatgctt
agggtcttaaatttccaaagacaacttagaagtgaaattatagcttgtactcgcagagat
actactcttgaaacagccgttaatgttaagacaaataaacgatctaagcgtcaaggactt
cgagaagctagagctacagagaaactcgagaaacagcagaagttggaagcagaaagaaaa
aagcgtcaaaaacaccaagaattcctcagttgtgtgttgcagcatagtaaagatttcaaa
gaatttcacagaaataatgttgcacgaatgggtcgaattaataaagctattcttactcat
catgctaacgcagaaagagaacagaagaaagaacaagaaaggatagaaaaagaacgtatg
cgtcgtcttatggctgaagatgaagagggttacagaaaacttattgatcaaaagaaagat
aaacgtctagcgttccttctatcacaaactgatgagtatatatgtaatttaactgagatg
gttaaacaacacaaaatggaacagaaaaagaaacaagttgaagcagaaaagagaaagaaa
aagaagaaaagatatcaggatggtgaattaggagatggtgaagatgagaatagtcgggtt
agtgtggtagaaatagccactggtcgaactctgagtggtgaagatgctccaacagttgct
caactcaattcgtttttggaatctcatcctggttgggaaccaatggaatctgacagtgaa
tatgaagatgatgaagatgaagacagtaatgaagagaagaaaatgagagataatgaagct
gaagaagaagaggagaaagtcaagaaaaccattcagaaagctaaagttgaagatgatgag
tacaaaactgaagaacaaacttattataatattgctcacactatcaatgaaacagttacc
cagcaagcatctataatggttaatggaaaactaaaagaatatcaaattagaggtcttgaa
tggatggtttcattatttaataacaatcttaatggtattttagctgatgagatgggtctg
ggtaaaacaattcaaactatatctttgataacttatctcatggagaaaaagagagtgaat
ggcccgtttcttattattgttccgttatctactctttcaaattggatgctcgaatttgaa
aaatgggctccaagtgttgttgttgtttcgtataaggggtctccagctggcagaagagcg
atacaatctcaaatgcgtgccactaagttcaatgtactactgactacttatgagtacatt
ataaaagacaaaagtgtcttggccaagttacaatggaaatacatgattattgatgagggt
cacagaatgaaaaatcatcactgtaaattaactcaagttctgaatacacattatctggca
tctcatcgtctacttctaactggaacaccgttgcaaaacaaacttccagagctttgggcg
ctgttaaatttcttacttccatcgatctttaagtcgtgcagtactttcgagcagtggttc
aacgcacctttcgcgaccaccggtgaaaaagtcgagcttaacgaagaagagacgatactt
attattcggcgtttacataaagttttgcgtcctttcctgctgagacgtctcaagaaagaa
gtcgagtctcagctgcctgacaaagtagagtatataattaagtgtgatatgtctgggtta
caaaaagttctttacaaacatatgcaaagtaaaggtattttgcttactgatggatcagaa
aagggtaaacgtggaaaaggtggtgcaaaggctttaatgaacacaattgtacaactccgc
aaactttgtaatcaccctttcatgttccaagctattgaagaaaaatattgtgaacataaa
ggtattccaggaggtggtctcataagtggaccagatctatacagagtatctggcaaattt
gagcttttagatagaattttaccaaaattgaaagctacaaatcatagagtattattgttt
tgtcaaatgacccagttgatgaccattatggaagattatttaaattggcgtcaatttaaa
tatcttagattggatggtactacaaaatccgaagacagaggtgatcttttgaaaaaattc
aatgatccaggatcagattatttcctatttattctgtctactcgtgctggaggtcttggg
ttaaatctacaagctgcggacactgttattatctttgattcagattggaatcctcatcaa
gatttgcaggctcaagacagagctcatcgaattggtcagaaaaatgaagtacgagtatta
cgattaatgactgtgaattcagttgaagagagaattttagctgctgccagatacaagctc
aatatggacgaaaaagtcatccaagctggtatgttcgatcagaaatctacgggctccgag
cgtcagcaattccttcaaacgattttgcatcaagatgacgctgacgacgaggaagaaaat
gaagtacccgatgacgagactgtgaaccaaatgattgccaggtctgaaggcgaatttgaa
tctttccaaaaactcgatacagaaagaagacagcaagaagctgcgatgggaatcaggacg
cgtctactcgacgaaagcgaacttccagaatggcttactcaagatgaagaagacgttgag
aaatgggcctacgaagaagatgaagataaagtggtatttggacgtggttcgagacaacga
aaggaagtcgactacaccaatagccttactgaaaaagagtggctcgaagcgattggggaa
gaagtcgaaggtggcgaggaagaagaggacaacgatagaagaaataagaagggatcgaga
aaacgaaagaggaaaggcgacgaagacgatgatctgatgccgaagaaaaggaaaaatttg
atcgatccaaaactgaaaaagtgtatgaaaaagatcatcagctgcgttatatcttacaat
gacacacccgacggtcgtgcagtgagcgaaatatttatggatctaccgcctcgtcgtgac
ttcccggattattacgaaatcatcaagaagccactctgcataaacaagatactgcaaaag
atagacgacggcaagtatccggatttggacgaactcgaaaaggactttacgcagctatgc
aaaaacgctcagatctacaacgaagaaaagtcaatggtctacgagaactcgctcgttctg
gagaagatctttgaaaacgcacgcaaaaagctagaggcaaagttcttggcggataaggcc
gaacgcgaggccagggaagcgtcccacattgcggccgtcgaggcgaccggcagcaacgac
gacacgaccgatccgagcgtgaagatgcgcatcaagctgaaaagtcgtaagagcgaagcc
acgcagagtacaagcgcgcccagcacgagtcgtggtggtcggagaaagaaagcagccaaa
aagtttatgttcgatgacgacgatgaagacgacgagcccgtcaatccgttggtgatcgcc
ggggacaactga
DBGET
integrated database retrieval system