Trichogramma pretiosum: 106656204
Help
Entry
106656204 CDS
T07644
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
tpre
Trichogramma pretiosum
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106656204
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
106656204
3'-5' decay
Other 3'-5' decay factors
106656204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
AAA_22
ResIII
UvrD-helicase
PAM2
AAA_7
AAA_16
T2SSE
AAA_24
Motif
Other DBs
NCBI-GeneID:
106656204
NCBI-ProteinID:
XP_014232444
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MADDEAASTRNKFLIGLRSRWLRSAAPRSVICDDNLEDAVVQTNSNLNVRFTWNTTDSYV
WSWSFEVTTKDDKYLRNVSLALDSHRKNYGILSVVGDNFCFHSPEADGQHVEALPVIEDP
LDSSNSSTHSYMVEIKFHAKSVGTYCQDVIFGFGDDCPVIRRQLVNDCVVDSDNVRLQAA
KEYLMYLSNNVPIPSKSIVPFNSPFVTDRDPRELELCDFYPKPDVDTFFLTHSTLKAIAL
DPQNYRRILHELVTIEEIARREQIARYNQVTELRLSNCFILASDTDGSTVAKYAAPGELF
AQFPLGREVSEDSKSGRLLLRSCTHLLVQKIEVNKNDPNGPPPVLGPKIFEAHVEDKCNH
SIFARLSKDCVEYFNLKHDTSEQMFVQFVMNRTPFAEWHRAIDALPDPELIFPKRQLGLS
GTSGNGILQQQLKNLKFEWLPEWASKLTDCQLNERQKEAVAAMMAPSNLILPPILILGPF
GTGKTSTIAQALRILLVNNLQSKVILCTHSNSAADLYVKEFFDLWYKETCDERLKPLRIY
YKGRTLNTVHLAVRPYCPIDSNGRFRDPTPDELENCGLVISTLATSSCLTGLDYTPTHII
IDEAAQALECEALACLSMATPKTRLILAGDQMQLAPEVYSDLARERGLGISLLERIHLIY
EKPHPCRVQLCKNYRAHADIVKLTSELFYGGQIEHGATLPRHELYAPLTFYACEGVVQKG
NNSTGFYNDIEAAEIAERVSELRRKWPADIWGPFQEGSIGVVSHYAEQVVRIRSELRKRK
LFNVSVERVLNVQGKQFVAVFISIVRTRHCSRLPAERNLSDYGFLTNPRLLNTAVTRAKS
LVAVVGDPVGLLTIGSCVKHWRLYLRSASVHGMEQRELEFHLNKVLEEPAAPALNPLAEE
FVPRESVRMENPTWIEYVPMPVPVPIIHCAVDPKGTVVVGKT
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacgaagctgcgtcgacgaggaacaagttcctcatcgggctacgctcgagg
tggctcaggtccgcggcgcccaggagcgtcatctgcgacgacaatctcgaggacgcggtc
gtgcagaccaacagcaaccttaacgtgaggttcacctggaacaccaccgacagttacgtc
tggagctggtcgttcgaggtcacgaccaaggatgacaaatacttaagaaatgtgagcctt
gcacttgattctcacaggaaaaattatggcattctatctgtggttggggataatttttgc
tttcactcgcctgaggctgacggacagcatgttgaagctcttccagttatcgaagaccct
ttagacagttcaaatagttctacgcactcttatatggttgaaattaagtttcatgccaaa
tctgttggaacttattgtcaggatgtgatttttggctttggtgatgattgcccagtcata
agaagacagttggttaatgactgtgttgtagattcagataatgttcgtctacaagctgct
aaagagtatctcatgtacttgagcaacaatgttccgataccatcaaagtcaattgtacct
ttcaattcaccttttgtaactgatagagatccaagagagttagaattatgtgacttttat
cctaaacctgatgtggatacattctttttgacacactccactttgaaagccattgctttg
gatcctcaaaattatagaagaatactgcatgaacttgtgactattgaagaaattgcacgg
cgagagcagattgcgcgttacaatcaagtgacggagttgagattatctaattgttttatc
ttagcttcagatacagatggttcgaccgtggctaaatatgcagcacctggagaattattt
gcacaatttcctcttggtcgcgaagtttcggaagactcaaaaagcggtcggctgcttcta
cgaagctgtacgcatttacttgttcaaaaaatagaggtcaacaaaaacgacccaaatgga
ccccctcctgtattgggtcccaaaatattcgaagctcacgtcgaagacaaatgtaatcat
tcgattttcgcgcgtctctctaaagactgtgttgaatacttcaatctaaaacacgacacc
agtgagcagatgtttgtacaatttgtcatgaaccgcacgcctttcgctgagtggcacaga
gccattgacgctttgccggatcctgagttaattttccctaaacgtcaactcggtttatct
ggaacttcgggaaatggcattcttcaacaacagctcaaaaatctcaaattcgaatggtta
cctgaatgggcttcgaagctaacggattgccaactgaacgagcgccagaaagaggccgtg
gcagcaatgatggcaccatcaaatttgatcctaccaccaatacttatattaggtccattc
ggtacgggaaaaacgtcgaccattgcccaagctctccgtatacttctggtgaacaaccta
cagagtaaagttattctgtgcactcacagtaacagtgcggctgatttatatgtcaaagaa
ttcttcgatctctggtacaaagagacatgtgatgagaggttaaaacccctcagaatttac
tacaaaggacgtacactaaatacggtacatctagcggtgcgcccatactgcccgatagac
tctaacggtcggttccgcgatcccacacccgatgaattagagaactgtggcttagtcatc
tcgaccttggcaacgtcgagctgtctaactggcttggactatacaccgactcacattatc
atcgacgaagctgcacaggctctcgagtgcgaagctttggcgtgtctgtcaatggccacg
ccgaagactcgtctcattctggctggtgaccaaatgcaattggcgccggaagtatacagc
gacttagctagagaacgtggcttaggaatcagtttactagaacggattcatctgatctac
gagaaaccacatccatgccgagttcaactttgtaaaaattaccgagctcacgctgacata
gttaagctcacatcagaactattctacggaggtcagattgaacacggcgctaccctgccc
cgacacgagctctacgcgccattaacgttttacgcttgcgagggtgtcgttcagaaggga
aacaactcgacaggcttttacaacgacatcgaagctgcggaaatagccgagcgagtatca
gaattacgacgcaagtggcctgccgacatttggggtccattccaggaaggttcaataggt
gttgtgtcgcactatgcggaacaggtggttcgcattcgtagcgagctgcgcaagaggaaa
cttttcaatgtctcggtggagcgtgtactcaatgtacaaggcaaacaattcgtggctgta
ttcatcagcattgtgcggacgaggcactgcagtcgattgcctgcagagcgaaatctcagt
gactacgggttcttgacgaatcctagactgctcaacacagcagttacgcgagccaaaagt
ttggtcgctgttgtcggagacccggttggactactgactatcggttcttgcgtcaaacat
tggcgcctatacttgcgctctgcgagcgttcacggaatggagcagcgggaactcgagttc
caccttaacaaggtactcgaggaaccagcagcaccggcgctcaatcctctggcagaagaa
ttcgtgccgcgcgagagcgtgcgcatggaaaatcccacgtggattgaatacgtcccgatg
ccggtgcctgttccgatcatacactgcgccgttgatccgaaaggaactgttgttgttggt
aaaacataa
DBGET
integrated database retrieval system
