Trichogramma pretiosum: 106656223
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Entry
106656223 CDS
T07644
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03013
Nucleocytoplasmic transport
tpre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106656223
09122 Translation
03013 Nucleocytoplasmic transport
106656223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106656223
03041 Spliceosome [BR:
tpre03041
]
106656223
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106656223
Spliceosome [BR:
tpre03041
]
Complex C
Other components
EJC/TREX
106656223
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106656223
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
CTB
Motif
Other DBs
NCBI-GeneID:
106656223
NCBI-ProteinID:
XP_014232513
LinkDB
All DBs
Position
Unknown
AA seq
1409 aa
AA seq
DB search
MTATRFWSPDLWKNWDKQGKTEFFKLMKTNYQEGHEHEWKRGLYELILSGVLGTMKKEVV
VTSLGELADQNPAIPSAIVDIFTIIDAEIQGETRSNFYFIVRESKKYLTERILKERLDTD
TLQDVGILKNMSFQTKFIKVKTKLYYKQKKFNLFREESEGYSKLIVELSQEHTESDVESL
LQIVKSLIGYFNLDPNRVLDILLETFENRPQDVAVFIPLIRSYMSDRQVLCEVLGFKYCS
TVNDTPKSLQVLTALMLQYGVINLDDILPWLVPDDRVIIRDYENEIKLAREYVRKMSVIS
TKEKEEEKEDRDAIVDKYSANQKFGLCEALLEVGAWDVAQNLFDRLPDFCFTDNKPIAKA
LCSMIHALIEPVYRKYCLIHPKLPGRKIAPLSSPLAPPPLKRLEDIHDRLLPMLIALGPN
LHHDPVLMYKIMRLNYAAIKQCSLNSAKLPLPKDSVLYYDILTILDVALLPALSFMDCNC
CVAEEIWNILKYYPYQSRYSLYARWKNDTPQQHAALLRKRADAQKKIKNVIKRVSKETIK
PVGRSIGKLTHSSPGVLFDYVIIQIQLYDNLIGPVVDSLKYLTNISYDVLSYCLIEALAS
AERNRFKHDGTSISLWLTSLAAFCGAIFKKYNIELTGLLQYVANMLKAQKSLDLLILKEI
VQKMAGIEASEELTSDQLDAMAGGDLLRIEAGYFSQVRNTKKSSQRLKEALAENDLAVAL
CLLMAQQKHCVVYRETEQSHLKLVGKLYDQCHDALVQFGTFLGSTMTVDEYVERLPSIHS
MLRDYHIHADVAFFLARPMFAHAINIKYDTLRKADPNYKKMSTSMKQAKYAEAAQAVMAP
VASSVRPLHSIKVWEDISPQFLVTFWSLSMYDLYVPVDSYQREINKLKQMASQAADSKDM
TASKGKKEQERYQTMIDKLQDEKKKQEEHVEKVHAYLRQEKDTWFLSRSAKSAKNETITQ
FLQLCLFPRCTFTTVDSMYCAKFVHTIHSLKTANFSTLLCYDRLFCDITYSVTSCTENEA
HRYGRFLCAMLETVMRWHSEKAIFDKECSNYPGFVTKFRVSNQFSEANDMVGFENYRHVC
HKWHYKITKAIVVCLDSKDYVQIRNSLIILIKILPHFPVLAKLSQILERKVEKVRDEERS
KRQDLHVLATSYCGQLKAKAPQMIRETDFHHVNDKATKSAETTNNDSNNDKAVNGVTAKE
TNNSESRTEKESKEKKSINVNDSSEKSKKENKESSENKEKYSKKEEEDAFDKKDKKYKDD
YHAASIDNFDRDLSSVSNSSAGSGQDDRDPKRRKVEVPKETKRTEAASEKKERTSAKKQA
RDDKEPRKEKKVGRKRDRTDEVSAAVDQKRRKDDDRAKSTHQNGDLPEHRADKHHYNKEK
SPYGKERVHERDGRETREKHRRSTDPKRR
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgacgagattttggagccccgatctttggaaaaactgggacaagcagggcaag
accgaatttttcaagttgatgaaaacaaattatcaggagggtcatgaacacgaatggaag
agaggcctttatgaactgatcctcagtggtgttcttggaactatgaagaaagaggtggtt
gttactagtttaggggaacttgcagatcagaatcctgcaataccatctgctattgtagat
atttttactatcatagatgcagaaattcaaggagaaaccagaagtaatttttattttatc
gtaagagaatctaaaaagtatcttacagaaagaattttaaaagaacgtttggataccgat
actctccaagatgttgggattcttaaaaatatgagctttcaaacaaagtttattaaagtg
aaaaccaagttatactacaaacagaagaaatttaatttatttagagaagagagtgaaggt
tattccaagctaattgtagagctcagtcaagagcacacagaatcagatgtagaaagcctt
ttgcaaatcgtcaaatcccttattggttattttaatctggatcccaatagagtattagat
atactattggaaacttttgaaaaccgacctcaagatgttgctgttttcatacctcttata
cgttcatacatgagtgatagacaagtattgtgtgaagtacttggttttaaatattgttct
acagttaacgatacacctaaatctctacaagtgctaacagcactaatgcttcagtatgga
gtaataaacttggatgacattttaccatggttggttcctgatgatcgagtaataattcgc
gattatgaaaatgaaatcaaattagcaagagaatatgttagaaaaatgagtgtgatttca
actaaagaaaaagaagaagaaaaagaagatagagatgctatagtggacaagtattctgct
aaccaaaaatttggtttatgtgaagcacttttggaggtgggagcttgggatgtagctcaa
aatttatttgataggttaccagacttttgtttcactgacaacaaaccaatagctaaggca
ctctgcagtatgattcatgcccttattgaacccgtctacagaaaatactgtttaattcac
cctaaacttcctggaagaaaaattgctccattatcaagccctttggctccaccaccttta
aaacgtcttgaagatattcatgataggttattaccaatgcttattgctttaggaccaaat
cttcatcatgatcctgtactcatgtacaaaataatgcgtttaaattatgctgctattaaa
cagtgttctcttaactctgctaagctaccattacctaaggatagtgtactttattatgat
atactaacaatacttgatgtagcacttctaccagcgctttcttttatggattgtaattgc
tgtgtagctgaagaaatttggaatattttaaagtactatccttatcagagcagatactct
ctttatgccagatggaaaaatgacacacctcagcagcatgcagcattattaagaaaacgt
gccgatgctcaaaaaaaaattaagaatgtgataaaaagagttagcaaagaaacaattaaa
cctgtaggaaggtcaataggaaaattgactcattcatcgcctggagtattatttgactat
gttataattcaaattcaattgtatgataatttgataggaccagtagtagattcacttaaa
tatcttacaaatatttcttatgacgttttaagttattgtttaattgaagctcttgctagc
gcagagagaaatcgtttcaagcatgatggaactagcatctctctttggctaacatctctt
gctgcattttgtggtgctatattcaaaaaatataacattgaattgacaggattgctacaa
tatgtagctaacatgttaaaagcccagaaaagtttggacttactgattttgaaagagatt
gttcaaaaaatggcgggcatcgaagcttctgaagaactaacatctgatcaattagatgcc
atggctggtggagatttacttcgcatagaagctggatattttagtcaagttagaaataca
aaaaaatcatcccagcgtcttaaagaagccttagctgaaaacgatttggctgtagctctt
tgtctattgatggctcaacaaaaacattgtgttgtttatagggaaacagaacagtcacat
ctgaaacttgttggtaaactatacgatcaatgccacgatgctctcgttcaattcggtact
ttcctgggctcaacaatgacagtcgacgaatacgtagagcggctaccttcgattcattcg
atgctccgagattatcacatacacgctgatgtggctttcttcttggccaggccgatgttc
gcgcacgctatcaatatcaagtacgatacgctgcgcaaagctgatccgaactataagaaa
atgtcaacgtcgatgaagcaggctaaatatgcagaagctgctcaagcagtcatggcacct
gtagctagctccgttcgccctttgcactcgatcaaagtttgggaggacatatcgccccaa
tttttagtgacgttctggtcgctgtcgatgtatgacctgtatgtaccagtagatagctat
cagcgcgaaatcaacaaactcaagcaaatggctagtcaagcggcagattcaaaggatatg
actgccagcaaaggtaaaaaagagcaagaaagatatcagacgatgatcgataagctgcaa
gacgagaagaaaaagcaagaggagcacgtggaaaaagttcacgcttacttgagacaagag
aaagacacgtggtttttgtcacggagcgcaaagtctgccaaaaatgaaacaatcactcag
tttttgcaactttgtctatttccacgctgcacgttcaccacggtcgattcgatgtattgc
gctaaattcgttcacactatacattctttgaaaactgctaacttttccacgcttctttgc
tacgacagactcttttgtgatataacatattcggttacatcgtgtaccgagaacgaagcc
catcgttatggtagattcttgtgtgccatgctggagacagtaatgagatggcattcggaa
aaggctatattcgataaagaatgtagtaattatccaggtttcgtgaccaaatttagagtg
tctaatcagttttcagaagctaatgacatggttggttttgaaaactaccgacacgtttgc
cacaaatggcattataaaattacaaaggcaattgttgtatgtcttgactcgaaagattat
gtacaaataagaaattctttgattatattaatcaaaattttacctcactttcctgttttg
gcgaaactgtctcaaattctcgagcgcaaagtcgagaaagtgcgggacgaagaacgctcc
aagaggcaagatcttcacgttttggcaacatcttattgcgggcagctgaaggccaaagca
cctcaaatgatcagagaaacagacttccatcacgttaatgataaggcaacaaaatctgca
gaaacaacgaacaacgattccaataatgataaggccgtgaacggtgttactgctaaagag
accaataattccgaatctcgtacagaaaaagaaagcaaagaaaagaaatcaatcaatgtc
aatgacagttctgagaagtcgaaaaaagaaaacaaagaatcatcagaaaataaagaaaaa
tactcaaagaaagaagaggaagatgcttttgataaaaaagataaaaagtacaaggatgat
tatcacgctgcgtcgatagataatttcgatagagatctctccagcgtttctaacagcagt
gcaggttcgggtcaagatgatagagatcctaagcgacgtaaagtggaggttccaaaagaa
actaaacgaacggaagctgcaagtgaaaaaaaggagcgcacctcggcaaaaaaacaagca
cgtgatgacaaagaaccacggaaagagaaaaaagttggcagaaaaagagacaggacagat
gaagtatcggccgcagttgatcaaaagcgtcgaaaagacgatgaccgggccaagagcacg
catcaaaatggagatctcccagagcatagagccgataagcatcattataacaaggaaaag
tcaccctacggcaaggaacgagttcacgagagagatggccgtgagacacgagaaaaacat
aggcggagcaccgatcccaaacgaagatga
DBGET
integrated database retrieval system
