Trichogramma pretiosum: 106656286
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Entry
106656286 CDS
T07644
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
tpre
Trichogramma pretiosum
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpre03021
]
106656286
03036 Chromosome and associated proteins [BR:
tpre03036
]
106656286
Transcription machinery [BR:
tpre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
106656286
Chromosome and associated proteins [BR:
tpre03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
106656286
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
SH2
S1
Tex_central_region
Tex_YqgF
HHH_9
HHH_3
Tex_N
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
106656286
NCBI-ProteinID:
XP_014232643
LinkDB
All DBs
Position
Unknown
AA seq
1674 aa
AA seq
DB search
MSQYIDSEAEESEEEMMETKRKMKRISSDESSEDEDEDMEEVKDLIDDRPIEEDDSDNSS
DDDDGSPNAKRKRTDDDFDDRLDEEDYDVIEENLGVKVERKRFRRLKKIQDEESDNEQDM
EADDERNAIANQLFEAGSGDEDEKSSPSRRDKNETEQYDDEEAEEESDADDFIVDDDGKP
LKTHKKRPRIFADSALQEAQDIFGVDFDYDELAKFDGDYDEDEDEDEEDEYADEDEVGRT
KKSKKASRRKGTKKSIFDIYEPSELKRGHFTDLDNEIRGTDIPERMQLRVVPVTPADEAE
LKEEGKWIYEQAFVKKTISIQDDHLTPEAKEAAVKKSSAIQKIVTALDFMRNQFMEVPFI
AFYRKEYYLTDLNMNDLWKIYKYDAKWCQLNSRKKALIKLFTRMKEYQTMKLSQDKDAPL
PENIRIFDDNDLQFLNGVQNIEELNDCYNHFMLYYHEDVRQMQQEAKKYNKEKKKQERQE
RRKKLIAEAEENGEEPPPEEIEEDEDDAAEETLKQAARTGPYALCKKAGLEPFAKRFGLT
PEDFAINLSEEYGTKEVEQDPMEASEIAKQYLGKKFQTTEEVLKAVTLMVAIQLSRQPLL
RESVRKLYRDKATITVKPTKKGLKMIDESHPIYSMKYLKEKPVKELKGDEYLKLLVAQED
KLIELTFSDKFQTHGNTNYIDHVASLYQRDEFSKNVQEWNTLRKNAVNLALSDMVIPDLK
KELKAILLSEAKDCVLRHCTRKMYNWIKHGPYKVDKNDFEESDEEWSTSKGLRVMGLAYV
PDFSVAAFACLVTPDGDCSDYLKLPHILKKKNSYRDNEKQLKMADLRSLRNFIETKKPHV
IVIGGESREATMIAEDLKEVVNGLMVDEQFPKIEVEIIENELSFVYANSNKGVAEFRDYP
DLLRQAISLARRMQDPLVEFSQLCNADDEILCLKYHPMQDQISKEDLLEGIHQEFINRVN
EVGVDINQVVLQPYYTNLVQFICGLGQRKGQYLIKMLKQTNQRLENRTQLVTSCHMGPKV
FVNCAGFIRIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDQDANPAGAL
EEILEAPHRLKELDLDAFAEELERQGFGNKGVTLYDIRSELDDRYKDLRPPFQSYTPDQL
FTALVKETPETFYVGKLLEATVIGISYRKPKGDQLDQANPVRNDETGLWQCPFCLKNSFP
ELSEVWNHFDAGSCPGKAVGVRLRLDNGLSGYINIKNLSDKHVDNPEERVRIGHRIHVRV
IKIEPERFGCECTSRGSDLQDVNKEWKPQKDLYYDTEAEKEDIKKEEDLKKGSQRQVYVT
RVIIHPSFKNITYIDAENLMATMQQGEAIIRPSSKGEDHLTVTWKVAEGVHQHIDVLEKG
KENKYSLGKSLFIGNEEFEDLDEIIARHINPMAAFASELIEYKYYKPQVLGNYEKAEEIL
RQMKKENENSIPYILSACQKEPGRFLLSYLPREKCGHEKIQVSHEGYEFRLKRFQRVMDL
IRWFKEHYRDPIPGKATPASSTPRAFPTTPALNVVNGVSTDAIQRVAQNMPRQLYNQLSQ
VATNATPHYTPYVTPYQTPVNPTPRYGENTPSSTTPHHHHHHHHQYAGSNAPDDWRKAAE
AWVVNKTTTPVYRSSSTPRPFKHPYKSPRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtacatcgattctgaagccgaagagagtgaggaggaaatgatggaaactaaa
agaaaaatgaaaagaatctcttcagacgaaagctctgaagacgaagatgaggacatggag
gaagtcaaggatttgatcgatgatcgtcctatcgaggaagacgacagcgacaactcctcc
gacgatgacgatggttctccaaacgcaaaaagaaagagaacggatgatgacttcgatgac
cgtctagatgaggaagactacgatgtcatcgaggagaatcttggtgttaaagttgaaaga
aaacgcttcagacgtttgaaaaagattcaagacgaggaatctgataatgaacaagacatg
gaggcagatgatgaaagaaacgctatagctaatcaattgtttgaagctggctcaggcgac
gaagatgaaaagagctcacctagcagacgcgataagaacgaaaccgaacagtacgacgat
gaagaggccgaggaagaatctgacgctgatgacttcatcgtcgatgatgatggaaaacca
ctgaaaacgcataagaagcgtccacgaattttcgctgattctgccctccaagaagctcaa
gacatttttggagttgattttgattacgatgaattggctaaatttgacggagattatgac
gaagatgaagatgaagatgaggaagacgagtatgcagacgaagatgaagtaggacgcacc
aaaaagtctaaaaaagcctcaagacgcaaaggaactaaaaagagtatcttcgacatttat
gagccaagcgaattgaagcgaggacattttactgacttggacaatgagattaggggaaca
gatattccagagcgaatgcaattgcgagtcgtaccggtaactccagcagacgaagccgag
ctaaaagaggaaggtaaatggatctatgagcaggctttcgttaaaaagactattagcatc
caagacgaccacttgacaccggaagccaaagaagctgcagttaagaaatcgtcagcaatt
caaaaaattgtcacagcactcgatttcatgagaaatcagttcatggaagttccattcatt
gcattctatcgcaaagaatattatcttactgatttaaacatgaacgatttgtggaagata
tataagtatgatgctaaatggtgtcaattgaactcgaggaagaaagccctcatcaaactc
tttacaagaatgaaggaatatcaaaccatgaaattatcacaagacaaagatgctccatta
cctgaaaatattcgtatctttgatgataatgatttgcagttcctcaacggtgttcaaaac
atcgaagaactgaatgattgctacaatcatttcatgctttactatcatgaagatgtgcgt
caaatgcaacaagaggcaaaaaagtataataaagaaaagaagaagcaagaaagacaagaa
agacgtaaaaagttaattgctgaagcagaggaaaatggggaagaaccaccacctgaggaa
atagaagaagatgaagatgatgctgctgaagaaacattaaaacaagcagctcgtactggt
ccatatgctctatgcaaaaaagctggattagaaccttttgcaaaaaggttcggattgact
ccagaagattttgcaattaacttgagcgaagagtatggcaccaaagaggttgaacaagat
ccaatggaagctagtgaaatagccaagcagtaccttggaaagaaattccaaacaactgaa
gaggtattaaaagcagttaccttgatggtagctattcaattgtctcgtcagccattgctc
agagaatctgtacgtaaactgtacagagataaagcgactatcaccgtcaagcctacaaaa
aaaggccttaaaatgattgatgaaagccatccgatttacagtatgaagtatctcaaagaa
aaacctgttaaagaattaaagggggacgaatacttgaaattgttagtggcgcaagaagat
aaacttattgaacttactttttccgataagttccaaactcatggaaacacaaactacatt
gatcatgtagcttctctttatcagagagatgaattcagtaaaaatgttcaagaatggaac
acgttacgtaaaaatgcagtcaatttagctttgtcagatatggtcattccagatttaaaa
aaagaactgaaggctatactgctaagcgaagctaaagactgtgtgctcagacattgtaca
agaaaaatgtacaattggatcaagcatggtccatacaaagtagacaaaaatgattttgaa
gaatcagacgaagagtggtcgaccagcaaaggattaagagtcatgggactcgcatatgtt
ccggacttttcagttgccgcttttgcatgtctcgtcacgccagatggagattgcagtgat
tacctcaagcttccacatattttgaaaaagaaaaatagctacagagataatgaaaagcag
ttaaaaatggcagatttgcggtcactaagaaacttcattgaaaccaaaaagccccatgtc
attgtaatcgggggtgaatcaagagaagccaccatgattgccgaggacctgaaggaagtt
gttaatggtttgatggtcgacgaacagttcccgaagatagaagtagaaataatcgagaac
gaattgtcgtttgtttatgctaacagcaacaaaggcgtagctgaattccgcgactatcca
gatctcttgcgacaggcaatttcattggctcgtcgcatgcaagatcctctggtcgaattt
tctcaattgtgcaacgcagatgacgagattctttgtttaaagtaccacccaatgcaagat
cagatatcaaaagaagacttacttgaaggtattcatcaagaattcattaaccgcgtaaac
gaagttggtgtagatataaatcaggtagttttgcaaccctactacacgaatctggtacag
ttcatctgtggtcttggacaacgaaaaggacaatacttgataaaaatgttgaagcaaacc
aatcagcgactagagaacaggactcaactggtcacatcatgtcacatgggcccaaaggtc
ttcgtcaattgtgctggattcatccgtatcgataccaatagccttggggacagtactgaa
gcctatgttgaggtactcgatggctcgcgagtccatcccgagacttacgagtgggcacga
aaaatggctgtcgacgctctagagtacgatgatcaagacgcaaatccagccggtgccttg
gaagaaattctcgaagcaccccaccgattgaaggagttggacttggacgctttcgccgag
gagttagagagacaaggctttggtaacaaaggtgtcactctgtacgatatcagatccgag
ctagatgacagatacaaagacctgcgacctcctttccagtcgtacacaccagatcagctt
ttcaccgcgctagtgaaagaaactccagaaactttttatgtcggtaagctcctggaagcg
acagtaatcggcatcagttatcgcaaaccaaaaggagatcaactagatcaagccaaccca
gtgcgcaacgatgagacaggcctatggcagtgcccgttctgtttgaagaattcattccct
gaattatccgaggtctggaaccacttcgacgctggctcttgccctggaaaagctgtcggc
gttagattgaggctcgataatggcctctctggatatattaacattaaaaatttatccgat
aagcacgtcgacaatcctgaagagcgcgttcgaatcggacacagaattcacgttcgagta
ataaaaatcgagccagaaagattcggttgtgagtgcactagccgaggcagcgacttacaa
gacgtcaataaagagtggaagccacagaaagatctatactatgacacagaagccgaaaag
gaggacataaaaaaagaagaagacttgaaaaaagggtcacagcgccaagtttacgtgact
cgagtaatcattcatccttccttcaaaaacataacatatatagatgcagaaaatttgatg
gcaaccatgcaacagggcgaagcaatcataaggccatcgagtaagggcgaagaccatctt
acagttacgtggaaggtggctgaaggcgttcatcaacatattgatgtgctcgaaaaggga
aaagaaaacaaatattctttgggcaaaagtttgttcattggcaacgaagaattcgaggat
ttagatgaaataatcgctcgccacatcaatccaatggcagcgttcgccagtgagctgatc
gaatacaaatactacaagccacaggtgttggggaactatgagaaagcggaagaaatccta
cgtcaaatgaaaaaagagaatgaaaattccattccatacatcttatcagcgtgccaaaaa
gaacccggtagatttctattgtcgtaccttccacgagagaaatgcggccatgaaaagatt
caggtatcacacgaaggttacgaattccggcttaaacgcttccagagggtgatggacttg
attcgctggttcaaagaacactacagagatcccatccctggcaaagcaacgccagccagc
agcaccccacgcgctttccccacgacgccagcactcaacgtcgttaacggtgtcagcact
gacgcgatacagcgagtggcacagaacatgccaaggcaactttacaatcagttatcacaa
gtggctaccaatgcaacgccacattacacaccatacgtcacaccttaccagactccggtg
aatccaactccgaggtacggagaaaacacaccaagcagcaccacaccgcatcatcatcac
catcaccatcatcaatatgctggtagcaatgcccctgatgattggagaaaagctgccgag
gcctgggtggtaaacaagacaacaactcctgtttatagatcttcgagcacgcctagacca
tttaagcatccatacaaatcaccaagagggacaccacacacgaactcgagccctcgcagt
atgtcccttagtggcgacggtactcccttgtatgatgagagttaa
DBGET
integrated database retrieval system