Trichogramma pretiosum: 106656584
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Entry
106656584 CDS
T07644
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106656584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106656584
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106656584
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106656584
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
106656584
NCBI-ProteinID:
XP_014233127
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVSEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLEYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEVSNWLSNSIDALNLQLDTFESEIESLLAGKKKKLDKDKQDRMDDLKAKLDKHRYHIR
KLETLLRMLDNMSVEVDTIKKIKDDVEYYIESSQEPDFEENEYIYDDIIGLDEIELSGVT
IPSSATTDSNNSNDTGGTPTSTNSCTSPIPSPSLSSTMHNHSSDSSTDNDKKSKPLKPMA
VRPMPNTQASTTMTCSTSNIKTSLSSSTPNKQAVTVSHSQISSMSHVTTNTGNFATITAA
HGNCQTSLSSSNKIQHGSENGLQSSIMANAVITPIVITQHQQQQMTQHQAIQQLQTVSHS
SQSHITQQHNNSTAPTPHIINNPQNQNMSEEMELISSVPCSATPQMSNQSSPILNHSISP
VTSTANSHLSKLPDNMSTLKSIAQQVIVRAGIEIPLTESNRNIYDTSKIKNSMNNNINLT
AEAHIPPLLGVAPLGPVPLQKEHQHQFQMMEAAFYHMPHPSDSERMRPYLPRNNCPTPPY
YQQVQLPHSDTVEFFQRLSTETLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQR
HEEPKIINEEFEQGTYVYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaacgaggaaattgcaaggtgaaatcgatagatgtctcaaaaaagtatcggag
ggtgttgaaacatttgaagatatttggcaaaaagttcacaatgctactaatagtaatcaa
aaagaaaagtatgaagcagatctcaaaaaagaaattaaaaaacttcaaaggttacgagat
caaatcaaaagttggattgcctcgggtgaaatcaaagataagagtacgttattagagtat
agaaagcttattgaaacgcaaatggaacggttcaaagttgtagagagagaaacaaaaaca
aaagcctattctaaagaaggcttaggagcagcacaaaaattagaccctgcacaaaaggaa
agagaagaagttagcaactggttatccaattcaattgatgccttgaatttacagttagat
acattcgagtccgaaatagaatctttattagctggaaagaagaaaaaattggacaaagat
aaacaagacagaatggatgatctgaaagccaaacttgataaacataggtatcacatacgt
aaattagaaacattattacgtatgcttgataatatgtccgttgaagttgatacgatcaaa
aaaattaaagacgacgttgaatattacatcgaatcatcgcaggaacccgattttgaagaa
aatgaatatatatatgatgatataattggtcttgatgaaattgaattatcgggagtaaca
attccttcttcagctactactgatagtaataatagtaatgatactggtgggacaccaacg
tctaccaattcatgcacttctcctattccatctccctctttaagttcaaccatgcataat
cattcaagtgatagctctacagataatgataagaaatcgaagccactaaagccaatggct
gtgagaccaatgcctaatactcaagcaagtacaactatgacttgcagcacctctaacata
aaaacttctttgtcaagtagtacaccaaataaacaagctgtgacagtaagccattctcaa
ataagttccatgagtcacgttactacgaatacaggaaatttcgcaacaatcacagcagct
catggtaattgtcaaaccagtctttcatcttcaaacaaaatacaacatggcagcgaaaat
ggattgcaatcgtcaatcatggccaatgctgttattacacctatagttattactcagcat
caacagcaacaaatgactcaacatcaggctattcaacaacttcaaactgtttctcattct
tcccaatctcatataactcaacaacataataacagtacagcaccaacacctcatataatt
aataatccgcagaatcaaaacatgtcggaagagatggaactaatttcttctgtaccctgt
tctgctactcctcaaatgagtaatcaatcttctccaatactgaatcattctatttcgccc
gtgacatctactgcaaatagccatctatctaaattacctgataacatgtcaactctaaaa
tcaattgcgcagcaagtaatcgttagagctgggatagaaattcctttaactgaatctaat
aggaatatatacgatacttcgaaaattaaaaattccatgaacaataatattaatcttacg
gcagaagcgcatattccaccattgctcggggttgctcccttaggtccagttccattgcaa
aaagagcatcaacaccaatttcaaatgatggaagcagccttttatcatatgcctcatccg
tcagattcagagcgtatgagaccatacttacctcgaaataactgtccaactcctccttat
tatcaacaggttcaattacctcattcggatactgtagaattttttcaacgtctttcaacg
gaaacgttattttttatattctattatatggaaggatcgaaaggacagtatctagctgct
aaagcattaaaaaaacaaagttggagatttcatacaaagtatatgatgtggtttcaaaga
cacgaagaaccaaaaatcattaacgaggaatttgaacagggaacttacgtctatttcgat
tacgaaaaatggggtcaaagaaaaaaagaaggttttacatttgaatacaaatatttagaa
gatcgtgatttgaattaa
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