Trichogramma pretiosum: 106656701
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Entry
106656701 CDS
T07644
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03013
Nucleocytoplasmic transport
tpre03015
mRNA surveillance pathway
tpre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106656701
09122 Translation
03013 Nucleocytoplasmic transport
106656701
03015 mRNA surveillance pathway
106656701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106656701
03041 Spliceosome [BR:
tpre03041
]
106656701
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106656701
Spliceosome [BR:
tpre03041
]
Complex C
Other components
EJC/TREX
106656701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
RRM_1
Motif
Other DBs
NCBI-GeneID:
106656701
NCBI-ProteinID:
XP_014233285
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MRRKSERNKAKAAVEKVVETVTPRRTTRRRARVSPSPDKEVVKESAPVVDDNNDITNIEQ
SNDVEGTQSNVTSSELIKSVLGAKEEDGNGSVWKVARADASPGEIQKLKLCRQRNTSETS
ESSTPSKKKSNKWQDSGESIAEEVESADERVAALEKVAISQKADDSSSVNQGQEPKEEVS
DYKENLPETTSVNLSDDQTNIDQQADSKENLPETTTISSLNSEQPSNSEEYQTLTNTQED
PSPDSRDIVADCVENEAVLNQGEEEQQEDSNLPSELENKTCESQQPTDINLNENSYKVVA
EQANEDSIQETVSPDDDINQENNEVSQVNKKYDTEIIQQNEKVEEESPNAEEPLIYDENT
TEDISLKNDNNSENEVFNSENNAESICIDTENCLIEESKEDEEEEGEIKDEVENEQSPHN
HKKWSTNKNSSRTERNAISYETHLEISESTMDKEDILEITDKSDDLSASLIASKPAKVSL
KRSFNSRIPQDSENNTEDNSVKQVSETNQNKENHADNDQPDQKSTTKRRRWGTTTIAAGV
GPAFSISTDSLKALVPGAKPVSLNEVRLTKDDEERVTNKRKKEISDNEEETDLTTNSEIT
KKDQKTDNQTASRRKISIIKETPRPASPSTAEAQATNILLIKNLVRPFTLNQIKELLSRT
GTIVENGFWMDRIKSKCYVEYKNEDQAFETRQALHGISWPLSNPKKLIVEYANKEDMEKA
WASTVDQPLVRKTEQSIANETWKQDTWDREERNQTVNKITVIREWDLGKEDGLLEKKEKE
RERKEIEKKKRQRSASPTHEVHLPAPARKFKKKEEEPPTAKLLDDLFRKTKTTPCIYWLP
LTNEQIMVKEELRRQHMAEHARRVEEIRRVERGRDSRRRSRPRK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcaaaagtgagcgtaacaaggcaaaggcagctgttgaaaaagttgttgaaaca
gtcactccaaggcgaactactagaagaagagcaagagtatcaccatctccagacaaagaa
gtagttaaagaaagtgcaccagtggtggatgataataacgatattactaatatcgagcaa
agcaatgatgtggaaggtacacaaagtaatgttacttccagtgaactaattaaatctgtt
cttggagcaaaagaagaggatggaaatgggtcagtatggaaagtagcaagagcggatgca
tcacctggagaaatccagaaactgaagttatgtagacagcgtaatacatcagaaacatct
gaaagttcaacgccaagtaaaaaaaaatcaaacaagtggcaggatagtggagaaagcatt
gcagaagaggttgaatcagcagatgagcgtgtagcagctttggaaaaggttgctattagc
caaaaagctgatgattcctcttctgtaaatcaaggtcaggaacccaaggaagaggtaagt
gattacaaggagaacctgcctgaaaccacttcagtcaacttgtctgatgatcaaacaaac
atagatcaacaagctgattccaaggagaacttgcctgaaactactactatatcttctctt
aactctgaacaaccatcaaacagtgaggaataccaaactttgactaatactcaagaggat
ccatcaccagatagcagggatattgtagctgattgcgttgaaaatgaagctgtacttaat
caaggagaagaagaacaacaagaagattctaatttaccttctgaattagaaaataaaact
tgtgaatctcagcagccaactgatattaaccttaatgaaaatagttataaagttgttgct
gaacaagctaatgaagattcaatacaggaaactgtcagtcctgatgatgatattaatcaa
gaaaataatgaagtttcacaagtgaataaaaagtatgacactgaaatcattcaacagaat
gaaaaagttgaagaagaatctccaaatgcagaagagccattaatttatgatgaaaatact
actgaagatatttcattaaaaaatgacaataattcagaaaatgaagttttcaattctgaa
aataatgcagaatccatttgtattgacactgaaaattgcttaatagaagagagcaaagaa
gatgaggaagaagaaggtgaaataaaagatgaagtagaaaatgagcaaagtcctcataat
cataaaaaatggtcaactaataaaaattcatcgagaacagagagaaatgcaattagttat
gaaactcatctggaaatttctgaaagtactatggataaagaagatattttagaaattaca
gataaatcagatgatttaagtgcatcattaattgcatcaaaaccagcaaaagtcagtttg
aaaagatcgttcaattctaggatacctcaagattcagaaaataatacagaagataattct
gttaaacaagtttcagaaacaaatcaaaataaagaaaatcatgcggataatgatcagcct
gatcaaaaatcaaccacaaaaagacgtcggtggggaactactacaatagcagcaggtgtt
ggaccagctttttctatatccactgattctttgaaggctttagtacctggggcaaaacct
gtatcgcttaatgaggtacgcctaactaaagacgatgaagaaagagttacaaataaaaga
aaaaaagaaataagtgacaatgaagaagagacagatttaactacaaattctgaaataacc
aaaaaggatcaaaaaactgacaatcagacagcgtcaagacgaaaaatcagtattattaaa
gagacgcctagacctgcttcacctagtactgctgaagctcaagccacaaatattttattg
attaaaaatttggtacggccatttacattaaaccagatcaaggaactcctctcgcgaaca
ggaactattgtagaaaacggtttctggatggatagaataaaatccaagtgttatgtagag
tataaaaatgaagaccaagcttttgagactcgacaagcattacatggtatttcttggcca
ctctcaaatccaaagaaattgatcgttgagtatgccaataaagaagatatggaaaaagca
tgggcgtcaacggtagatcagcctttagtcagaaaaacagagcaatctattgcaaatgag
acttggaagcaagatacatgggacagagaagaacgaaaccaaaccgtaaataaaataaca
gtcattcgggaatgggatcttgggaaagaagatgggctacttgaaaagaaggaaaaggag
cgagagcgaaaagaaatagaaaagaaaaaacgtcagcgcagtgcatctccaacacatgaa
gttcatcttcctgcacctgcgagaaaatttaagaagaaagaagaggagcctcccacagca
aaactattagatgatctttttaggaaaactaaaaccactccttgtatatattggttacct
ttaacaaatgaacagattatggtcaaagaagaattaagacgacaacacatggcagaacat
gcacgccgagtagaagagatacgacgagtagagagaggtcgagattcacgacgccgtagc
cgcccgagaaaataa
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