KEGG   Trichogramma pretiosum: 106657373
Entry
106657373         CDS       T07644                                 
Name
(RefSeq) DNA ligase 3 isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
tpre  Trichogramma pretiosum
Pathway
tpre03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tpre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    106657373
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpre03400]
    106657373
Enzymes [BR:tpre01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     106657373
DNA repair and recombination proteins [BR:tpre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     106657373
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C RNA_ligase LIG3_BRCT Spectrin_5 DUF1871
Other DBs
NCBI-GeneID: 106657373
NCBI-ProteinID: XP_014234355
LinkDB
Position
Unknown
AA seq 1006 aa
MEDDDEKPFAIEKAKTGRAKCKKCKNPIDKDEVRIARMMANPFGEGKMKAWHHVNCLFEV
FAKQRATTKRIEDPEADIDGWAEMDAEDKKEIMEKISEFEDSDPFKALKKKMKAKENSNF
DSSAKKNKESIDKAKSEKGHSSKTESTSPIQTIPKKISQDDKFSEFQRLCHDISNESSYL
EKTAIVKKFFTQGSQSNGFQSDIILWCRLLLPLAEKRIYNLQSKALIKLFSRILGQNEDA
MLEDLEQGDVAQTIEKFFEKSSVIKPLKTSELTLQEVDEFLDKLSKLTKEDEQTYHFKSI
VKRCTANDLKMIIRLIKRDLRINTGPKHILAAVHKDAYTAFQVSQDLVGIIKKCLGITPS
SPEVNAGKKAKLANLSLMTPVLPMLAEACKSVEMAMEKCPNGMFSEVKYDGERVQVHKNG
SDFRYFSRSLKPVLPHKVNFLQEYIPKAFPSGDDLIIDAEILMIDTRNGQPLPFGTLGVH
KKNEFKHANVCLFIFDIIFYNGESLLERTIKERRKLLEEKMIQIPNRIVLSEVEELDDPD
KLAKMISKVFKLGLEGLVLKDLKSKYEPGKRHWLKIKKDYLLKGAMADTADLVVIGAWYG
TGQKGGMMSIFLMGCHDPTRDKWLTVTKVHSGHDDATLALLQKKLDMIKISKDPNLVPSW
LIANKPMVPDFVARDPKVNKIYVQKQPVWEITGAEFTNQGVHTADGISIRFPRVTRIRDD
KDWKTATNLQELHNLFNKSADSVDFLLLQGGSATDSDNAKSKKKIKAASSKVAADTRKVD
ETEAMDDECVSANETKSSERKRKRKSRDETDSDINETSPKKSKKTMHTSEEKDKDDLYYS
DVSIDGQKKAAYYSFIGTDYIEHDASGYPLNWVEGRKPHLLPKNAKPISELDRAEVNGRC
ILPNVRVCFAKDLSYDKMSVALRTLKTLGAVILSKSERSQATHVIHGRTSIPATFCNVES
GIPKLARHVTEEWINAAVARCKTPNAVDFAVTLSETYCSCLCARHK
NT seq 3021 nt   +upstreamnt  +downstreamnt
atggaagatgacgatgaaaagccattcgctatcgaaaaagccaagactggaagagccaag
tgtaaaaaatgtaaaaatcctatcgacaaggatgaagtaagaattgcgagaatgatggcc
aatccttttggcgaagggaaaatgaaagcttggcaccatgtcaattgtttatttgaagtt
tttgctaaacaacgtgccactaccaaaagaatcgaggatccagaagctgatatcgatggt
tgggcggagatggatgccgaagacaaaaaagaaattatggaaaagatatctgaatttgag
gattcagatcctttcaaagcattgaaaaagaagatgaaagccaaagaaaattctaacttt
gactcttcggcgaaaaagaacaaagagtcgattgataaagcaaaaagtgaaaaagggcac
tccagtaaaactgagtcaacttcgccaattcaaacgattccgaagaaaattagccaagat
gacaaattttccgaattccaacggttatgtcatgatatatcaaacgaaagttcatacctg
gaaaaaacggcaattgtaaaaaagttttttacccaaggatctcaaagtaacggatttcaa
agtgacattattctttggtgcagattattattgccactggcggaaaaaagaatttacaat
cttcagagcaaagccttaattaaattattttcacgaatacttggccaaaacgaggatgcg
atgctcgaagatttagaacaaggtgacgttgcgcaaacgatcgaaaagttttttgaaaaa
agctcagttatcaaacctcttaaaacgagtgaattaactttacaagaggttgatgaattt
ttagataaattgtcaaaacttacgaaagaagatgaacaaacatatcactttaaatcaatc
gttaaaagatgtaccgccaatgatttaaaaatgattattcgtttaattaaacgagatctt
cgaattaatactggtcctaagcacatattggctgcagttcacaaagatgcttatacagct
ttccaagtttcccaagatcttgtagggataataaaaaaatgtttagggattaccccgagt
tcgcctgaagttaatgccggaaaaaaagccaaactagccaacctttcgttaatgactcct
gtgttacccatgctggcagaagcatgtaaatccgtcgaaatggctatggaaaaatgtcct
aacggcatgttttcggaagtgaagtacgatggtgaacgtgtacaggttcataaaaatgga
tctgattttcgatatttcagccgatcgctaaaaccagttttacctcacaaagtcaatttt
ttacaagaatatattccaaaagcctttccgtcgggtgatgatttgataatagatgctgaa
atactgatgatcgatactcgtaacgggcaaccattaccatttggaacattaggggttcat
aagaaaaatgaattcaagcatgcaaatgtttgtttattcatttttgacattatattttac
aatggcgaatcacttttagagagaacaataaaggagcgaagaaaattattagaagaaaaa
atgattcaaatacctaatcgaattgtattatcggaagttgaagagttggatgatcctgat
aaactagcaaaaatgatatctaaagttttcaaattaggtttggaaggattagtactcaaa
gatttaaagagtaaatatgaaccaggaaaaagacactggttaaagataaaaaaggattat
ttgctgaaaggagccatggctgataccgcagatctcgttgttatcggagcttggtacggc
acaggtcaaaaaggtggcatgatgtctatatttttgatgggttgtcatgatcctacacgg
gataaatggttaactgtaacaaaggtacattcaggacacgacgatgccaccttagcttta
cttcagaaaaaacttgacatgataaaaatcagtaaagatccaaatttagtacccagttgg
ttaatcgccaataaacctatggtgcctgattttgttgcaagagatcccaaagtaaataaa
atttatgttcagaaacaacctgtgtgggaaataacaggagcagaattcactaatcaaggt
gtacacacagccgatggtataagcattagattccctcgagtaacgcgtattcgcgatgac
aaggattggaagactgcgacaaatctacaagagcttcataatttattcaacaaaagtgcc
gattccgttgattttttgttgcttcaaggaggatctgccactgattcggataatgccaag
tcaaagaaaaaaatcaaagcagcatctagcaaagtcgctgcagacacaagaaaagtagat
gaaactgaagcgatggatgatgaatgtgtatcagcaaacgaaaccaaaagttcggaaagg
aaaagaaaaagaaagtcgcgtgacgaaaccgatagtgatataaatgaaacgtcccccaaa
aagtctaaaaaaacaatgcacactagtgaagaaaaagacaaagatgatttatattatagt
gatgtcagtattgatggacagaaaaaggctgcatattattcttttattggtacagattat
atagagcacgatgcatctggatatccattaaattgggttgagggtcggaaacctcatctt
cttcctaaaaatgccaaacctataagtgaattagacagagcagaagtgaacggacgatgt
atattaccgaatgtgcgcgtttgtttcgccaaggatttgagttacgataaaatgagcgtc
gctctacgcacattgaaaacccttggggcagtaattctttcaaaatcggagcgttcccag
gccactcatgtgattcatggacgtacgagtatccctgcaacgttttgtaacgtggaatca
ggtatccccaagttggcaaggcatgttaccgaagaatggattaatgcagcggtggctcgc
tgtaaaactcccaacgccgtagacttcgcagttactttgtcagaaacttattgctcttgt
ttatgtgctcgtcacaaataa

DBGET integrated database retrieval system