Trichogramma pretiosum: 106657447
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Entry
106657447 CDS
T07644
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106657447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpre03021
]
106657447
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106657447
Transcription machinery [BR:
tpre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
106657447
RNA polymerase I system
106657447
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
106657447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOW2_Spt5
Spt5-NGN
KOW7_SPT5
KOW5_SPT5
KOWx_SPT5
KOW6_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
106657447
NCBI-ProteinID:
XP_014234467
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MSDSEESVYSENGSPRRAGSESDNRSVASRSPAGSPTRSASRSRSRSGSRSRSLSRSRSR
SKFRSRSRSRSRSASGDEEGEGEVLDEDIDEYDEEEEEDNEGPRKKKRKKGQVYDFIIQE
AEVDDEPEDDEEWEDGAQEIGIVPNEIDELGPTAREIEGRRRGTNLWDSQKEDEIEEYLR
NKYANESAAAHRFGDGGEEMSDEITQQTLLPGVKDPNLWMVKCRIGEERATALLLMRKFL
TYQFTSEPIQIKSVVAPDGVKGYVYIEAYKQPHVKAAIENVGNLRMGQWKQQMVPIKEMT
DVLRVIKEQTGLKAKQWVRLKRGIYKDDIAQIDYVDLSQNQVHLKLLPRIDYTRPRGALR
TAQSESEAMKRKKKRRPAAKPFDPEAIRSIGGEVTSDGDFLIFEGSRYSRKGFLYKNFTM
SAVLTEGIKPTLSELEKFEETPEGVDLELSGAPVTGVSSGKDEGAGASGHSFSAGDNVEV
KEGELMNLQGKVVSVDGNMITVMPKHEELTEALMFTANELKKYFTMGDHVKVVAGRYEGD
TGLVLRVEPNRVVLFSDLSMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDPQTVG
VIVRLERENFHILSMHGKVVEARPQGLTKRKENRNTVALDSQQNSIHKKDIVKVVDGPHS
GRGGEIKHLYRSFAFLHSRMFIDNGGIFVCKTRHLQLAGGGKPNNAVSSAPVNSGFMSPR
ITSPMHPAAGGGGSTPGARGRGGGGRGGRGRGGHIGARRDRDLIGSTIKITGGPYKGNVG
IVKDATESTARVELHSTCQTISVDRSHIANVGVPTKEGGFSSYSRTPSYGAGGQTPMYSG
GNKTPMHGGATPMYETGSRTPHYGSMTPSHDDGSRTPGRTGAWDPTVTNTPARGENFDNY
SMDDGGASPGYVPNYPQSGPFTPQTPGTMYGSEQSFGPYQTSPSPAASANPSPSPAAYGT
STPSPAGTGYTPTGAQSYTSASPMSFSPMTPGGAASPYNPQTPGSSMGDSNQAFVSYTSD
WPSVDLEVRVRDDYSDEGLAGQQGYITTITDAMVTMYLPFKDKSVNMYYDAIEPVVPSQN
DRVRVILGEDRDSTGTLLSIDNQEGVFKSSSGEVKMLNLRFLCKLRSK
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactcagaagagagcgtgtattcagaaaatggaagcccgcgtcgtgcaggtagt
gaaagtgacaatagatctgttgcatcaagaagtcctgccggaagcccaactagatctgca
tctagatcacgatcacgcagtggctccagaagtagaagtctttcaagatctcgaagtcgt
tcaaaattcagatccagatctagatcaaggtctcgctcagcttccggagatgaagaaggc
gaaggtgaggtacttgatgaagatatagatgaatatgatgaagaagaggaagaagataat
gaaggaccaagaaagaaaaaaagaaagaagggtcaggtttatgatttcattattcaagaa
gctgaagttgatgacgaacctgaagatgatgaagaatgggaagatggagcacaagaaatt
ggtattgtaccaaatgaaattgatgaactgggacctactgctagagaaattgaaggaaga
agaagaggcacaaacttgtgggactctcaaaaagaagatgagattgaagaatatctcaga
aacaaatatgcaaatgaatctgcagcagcacatcgctttggtgatggcggtgaggaaatg
agtgatgaaatcactcagcaaactttattgccaggagttaaagatcctaatttatggatg
gtgaaatgtcgtattggagaagaaagagcaacagctctgcttctgatgagaaaattttta
acttatcagtttacaagtgaacctattcaaattaagtctgtagtggcaccagatggtgta
aaaggatatgtttacatagaagcttacaaacaacctcacgtaaaagctgccatagaaaat
gttggaaatttacgaatggggcaatggaaacagcaaatggttccaataaaagaaatgact
gatgttttacgtgttataaaagagcaaactggacttaaagcaaaacagtgggttaggctt
aagagaggcatttacaaagacgacattgcccaaattgattatgtggatttgtctcaaaat
caagtacatcttaaattactaccgagaattgattacaccagacccagaggtgctctaaga
acagctcaaagtgaaagtgaagcaatgaaaaggaaaaagaaaagaagacctgctgcgaaa
ccatttgatccagaagctatccgatctatcggtggtgaagttacaagtgacggtgatttt
ttaattttcgaagggagccgatacagtcgcaagggatttttgtacaaaaattttacaatg
agtgcagtgctcacagaaggtataaaacccactctatcagaacttgaaaagtttgaagaa
acccctgagggtgtcgacttagaactcagtggagctccagttactggtgtatcatctggt
aaagatgaaggtgcaggagcatcaggtcacagtttcagcgccggtgataacgtcgaagtt
aaggagggtgaattgatgaatttacaaggtaaagtcgtatccgtcgatggaaacatgatc
acggtcatgccgaagcatgaggagctcacggaagccttgatgttcaccgccaatgaattg
aaaaaatacttcaccatgggcgatcacgttaaagttgtagcaggtcgatacgaaggagac
accggtttagttctacgcgttgaaccaaatcgagtcgtgctattttccgatttgtccatg
cacgagctcgaggtcttacccagagatcttcagctgtgctccgacatggccaccggcgtg
gacagtttaggtcaattccagtggggcgatctcgtacaactagatccacaaaccgtcggc
gtgatcgtacgcttggagcgcgaaaactttcacatcttgtcgatgcacggaaaagtcgtc
gaagccagaccgcaaggtcttaccaagagaaaggagaaccgaaatacggttgcgttggat
tcgcaacaaaacagcatccacaagaaagacatcgtcaaagtggtcgacggaccccattcc
gggagaggcggcgaaatcaagcatctgtacagaagtttcgcgttcctgcactcaagaatg
ttcatcgataacggtggtatatttgtatgtaaaacccggcatctgcaactagccggcgga
ggcaaaccgaacaatgccgtttcctcggcgccggtcaactctggcttcatgtcacccaga
atcacgtcgcccatgcatcctgcagctggcggcggtggatcgactcccggcgcgcgcggt
agaggcggcggcggcagaggcggacggggtcgtggcggacacatcggtgctcgtcgcgat
cgcgacctcatcggttcgaccatcaagatcacgggtggcccctacaaaggcaacgtcggc
atcgtcaaggatgccacagagtcgacagctcgagtcgagcttcactcgacttgccagacg
atctctgtcgatcgttcgcatattgccaatgttggagtacccacgaaggagggcggcttc
agcagctacagccgtaccccgtcctacggtgcaggtggacaaacgccaatgtactccggg
ggcaacaaaactcccatgcacggaggagccacccctatgtacgagactggctcgcgtaca
cctcattacggctcgatgacgccctcgcacgacgacggatcacgcacccccggtcgtacc
ggcgcctgggatccgaccgtcaccaacaccccggctcgcggcgagaacttcgacaactac
agcatggatgatggtggagcgtcaccgggctacgttcccaactatccgcagtcaggacct
ttcacaccccagacacctggaaccatgtacggcagtgagcaaagcttcggaccctatcaa
actagccctagtcctgctgctagcgccaatcctagcccgagcccggcagcttacggcacc
agcacaccgtcaccggctggaacaggctacacccccaccggagcgcagtcttatacttct
gcctcgccgatgagcttcagtccaatgacacctggtggagcggctagcccgtacaatccg
caaacgcccggatccagcatgggcgactcgaatcaggcctttgtctcctacacttctgat
tggccgtcggtcgatctcgaggtccgcgtgcgcgacgactactctgacgaaggattggcc
ggacaacagggatacatcactactataacggacgctatggtgaccatgtatttacccttc
aaagacaaatccgttaatatgtattacgatgcaatcgagcctgttgttccgtcgcaaaat
gatcgtgtccgagtgattttgggcgaggatcgcgactcgacgggtacgcttttgtccatt
gataatcaagaaggtgtattcaaatcttccagcggagaagttaaaatgttgaatcttaga
ttcttgtgtaaattacgttctaagtaa
DBGET
integrated database retrieval system
