Trichogramma pretiosum: 106657457
Help
Entry
106657457 CDS
T07644
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03013
Nucleocytoplasmic transport
tpre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106657457
03015 mRNA surveillance pathway
106657457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106657457
Enzymes [BR:
tpre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106657457
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106657457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
106657457
NCBI-ProteinID:
XP_014234479
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MSAQVDWGKLALEQADKVGTMGISDKVPLPTDSEDDSKDEIPVAEKSLLQKIIRKGLVET
TKPLDIQRKNPNSPLYSVKTFEALHLKPELLKGVYDMGFNTPSKIQETALPTLLADPPQN
MIAQSQSGTGKTAAFVLAMLSRVDVTKNYPQVLCLSPTYELAIQTGEVAAKMSKHCPEIK
IKYAVRGEDLQRGTKLSDHIIIGTPGKVLDWAIKFKFFDLKKISVFVLDEADVMIATQGH
QDQCIRIHKLLPQNCQMMFFSATYETEVMEFAEIIVSNPIIIKLLKEEESLDNIKQYYVK
CKDGDIDDKYQAITNIYGVITIGQAIIFCHTRKTANWLANKMQKDGHTVAILSGDLTVND
RIVVLDRFREGLEKVLITTNVLARGIDVEQVTIVVNFDLPMDQNRKADCETYLHRIGRTG
RFGKSGIAINLIDSPHSMQLCREIERHFKKKIHFLNTEDPDEIEKIGA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctcaagtggattggggaaaattagccctcgagcaggctgataaggtgggaacc
atgggaatatcggataaagtacctcttcctactgactcagaagatgattcaaaagatgaa
atccctgttgctgaaaaatccttgttgcagaaaattatcagaaagggacttgttgaaaca
acaaaacccttagatattcaaagaaaaaatcccaactcgccgttgtacagtgtaaaaact
tttgaagctttgcatttaaaaccggagctattaaaaggtgtgtatgatatgggattcaat
acaccatcaaagatccaagaaaccgcattacctaccttattggctgatccaccacaaaat
atgattgcccaatctcaatctggtactggaaaaacagcagcatttgtcttggccatgtta
agtcgtgtagatgtgacaaaaaattatccacaagtactttgcctatctccaacatatgaa
cttgctattcaaacaggagaagtagctgctaaaatgtcaaaacactgcccggaaataaaa
attaaatatgctgtgagaggagaagatttgcaaaggggaacaaaattatctgatcacata
atcattggaaccccaggaaaagttttagattgggctattaaatttaaattttttgacctt
aaaaaaatatctgtttttgtacttgatgaagcagatgttatgattgccacacaagggcat
caggatcaatgtatcagaattcataaattgctccctcaaaattgccaaatgatgttcttc
tctgcaacttatgaaacagaagttatggaatttgctgaaatcattgttagcaatcctatt
attataaaactgctgaaagaagaagaaagcttagataatattaaacaatactatgttaaa
tgtaaagatggagatattgatgataaatatcaagccataacaaatatttatggcgttatt
accattggtcaagctattatcttttgtcatactcgaaaaactgcaaattggcttgcaaat
aaaatgcaaaaagatggacacactgtagcaatattgtccggtgatcttactgtcaatgac
cgaatagttgttcttgatcgatttagagaagggcttgaaaaagtattaattactaccaat
gtattagctagaggaattgacgtagaacaagtaacaattgtagttaattttgatttaccc
atggatcagaatcgtaaagccgactgcgaaacatacctgcatcgaatcggtagaactggc
cgattcggtaaatctggaatagcaattaatttgatcgactcaccgcattcaatgcaactg
tgtcgagaaatcgagcggcatttcaagaagaagattcacttcttgaataccgaagatccc
gatgagattgaaaaaatcggtgcttaa
DBGET
integrated database retrieval system
