Trichogramma pretiosum: 106657643
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Entry
106657643 CDS
T07644
Name
(RefSeq) histone deacetylase 6 isoform X2
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tpre
Trichogramma pretiosum
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpre01009
]
106657643
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106657643
04131 Membrane trafficking [BR:
tpre04131
]
106657643
03036 Chromosome and associated proteins [BR:
tpre03036
]
106657643
Enzymes [BR:
tpre01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
106657643
Protein phosphatases and associated proteins [BR:
tpre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106657643
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
106657643
Membrane trafficking [BR:
tpre04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
106657643
Chromosome and associated proteins [BR:
tpre03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
106657643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Polo_box_2
Motif
Other DBs
NCBI-GeneID:
106657643
NCBI-ProteinID:
XP_014234740
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MSVAKKNVTNNNSRKSPRIAHAKPSAALLAAKREGAERKRNLGNISTIIRDIYQKAIDAK
DMIRHNTGVIYEPSMVEHKCLWDPNYPECPERLSRVLDRCQQLGLLERCKYIAPRKAEAS
ELLLKHTPGHLEIIKSTDNVNDVEKLEKLSSNYDAVYFHPKTYELSLLATGSTIDLVKNI
CLGNIQNGMAIIRPPGHHAMKSEYCGYCFFNNVAIAAEVALKNNLAKKILIVDWDVHHGQ
ATQQMFYNDSRVVYFSIHRYEHGEFWPNLKESDYHYIGEGPGEGYNFNVPLNKTGMTNAD
YIAIFQQILLPMAYELNPDLILVSSGFDAAMGDEKGQMNITPACYSHLLNMLMGLANGKV
AVILEGGYCLRSLAESAALTLRRLLGDPCPMLENLEPPCESIQETILNVIYSHRSHWKCY
QFQDTFNVNGYNTNSKQKKHLPNVIYKGPEEFPTVFETRNCYPVQNRSEVLQINKKLDHL
AKITKLSKAQHQVGIVYDERMLKHYNVVDESHPERPSRISSIYSKHKDYGLLTRCHTFQG
RLGSDQEILLAHTQEYLDSIKKTSETKLRDLAKQAGELNSVYFHPETWDSARVAVGSLLE
IVDKVLNEECQSGVAIIRPPGHHAADDAACGFCIFNNIAIAAKYAVSKYGLNRVMVLDWD
VHHGNGTQSILEDDPNILYMSLHRYDNGNFFPHSKAADYTVVGTGKGEGFNVNIPFNKKG
MGDVEYTAAFQQVVMPIAYQFNPELVLVSAGFDACIGDPLGGFKLSPEMYGHMTHWLSAL
ANGRVVLSLEGGYNVNSIANAMSMCTKALLGDPLPALDPPKDPCCPSAVQSLRLVIETQR
QYWPNLVFSDRALPLESAGLLPKARVPRAKPTQRLLDGPPAELTTIQKSAEPPRPPSPFL
PGSTTSLEEGLKKLSVRDCINPDQQQRQNTSNEGAPGREEEQQNQSSASSSSQAPAGAAA
ATTLQDYLQSNLRALVEEQMFAVVPLRDCPHLRAAVRPVPTTGIDCATPCAECASTAENW
VCLTCYSVHCARSVNQHALDHESVHQHPLALSFSDLSVWCYACEAYIDNPVLYDARNAVH
LSKFKYVMPWTYDTPRNHSDSD
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcgcaaagaagaatgtcaccaacaataatagcagaaaatcaccaagaattgct
catgcaaaaccctcagcagctttattggctgccaaacgagaaggtgctgaacgtaaaaga
aatcttggaaatatttcaacaattattagagacatttatcaaaaagctatagacgccaaa
gacatgattcgtcacaatacaggagttatctatgaaccttcaatggttgagcataaatgt
ctgtgggatccaaattatccagaatgcccagaaaggctaagtagagtgcttgacagatgc
cagcaattgggtttactagagagatgtaaatatattgctccacgtaaagcagaagcatca
gaacttttattaaaacatacacctggtcatttggagataatcaaatctactgacaatgtt
aatgatgttgaaaaattggaaaaattatcttctaattatgacgcagtttattttcatcca
aaaacatatgaattatctcttctagcaactggttcaactattgatttagtgaaaaacatt
tgcttaggaaatattcaaaatggcatggcaatcataaggcccccaggacatcatgctatg
aaatctgaatactgtggatattgcttctttaataatgtagctatagctgcagaggtcgct
ttgaaaaataatttggcaaaaaaaattttgattgttgattgggatgttcaccatggacaa
gctacacaacaaatgttttataatgattcaagagttgtatatttttctatacatcgttat
gaacatggagagttttggcccaatttgaaagagtcagattaccactacattggagagggt
ccaggagaagggtacaattttaatgtgcctctcaacaaaactggcatgaccaatgcagat
tatatcgcaattttccaacaaattttacttccaatggcatacgaattaaaccctgatctc
attcttgtctcatctggatttgatgcagcaatgggagatgagaagggtcaaatgaacatc
actccagcttgttattctcatttacttaatatgttgatgggcttagctaacggtaaagtt
gctgtaattttagagggcggctattgtctaaggtctttagccgaaagcgcagctcttact
ctaagaagacttttaggagatccttgcccaatgttagaaaatttggaacctccttgcgaa
agtattcaggaaactattttaaatgtgatatactcacatagatcccattggaaatgttat
caatttcaagatacctttaatgtgaatggatacaataccaattccaaacaaaagaagcat
ctacctaatgtcatctacaaaggccctgaagaatttccgacggtattcgaaacacgcaat
tgttatcccgttcaaaatagatcggaggtattgcaaataaacaaaaaattggaccatctt
gcaaaaattacgaaactcagtaaagctcagcatcaagtcggcatcgtctacgacgagaga
atgttgaaacattacaacgtcgtcgatgagtcgcatcccgagcggcccagcagaataagc
agcatatactccaaacacaaagattatggcttattaacaagatgtcataccttccaagga
agactcggaagcgatcaagaaattttactggctcacacgcaagagtatctcgatagcatc
aaaaaaaccagcgagacgaaattacgagacctggcgaagcaagccggtgaactgaactcg
gtctactttcatccggagacttgggacagcgctcgagtcgccgtcggttcgctcttggaa
atcgtcgacaaggtcttgaacgaggagtgccagagcggcgtggccattattcgaccaccg
ggacatcatgcagctgacgatgcggcctgcggtttttgcatcttcaacaatatcgccatt
gccgccaagtatgcagtgtccaaatacggcttgaacagagttatggtactcgactgggac
gtgcatcatggtaacggcacgcagtcgatactcgaggacgatccaaacatactgtacatg
tcgttgcatcgctacgacaacggtaactttttccctcattccaaggcagcggattacacg
gtggtgggcacgggcaagggagaaggtttcaacgtcaatattccctttaacaagaaaggc
atgggcgacgtagagtacacagcggcttttcaacaagtagtcatgccgatcgcctaccag
ttcaatccggaattggttttggtttccgctggattcgacgcctgcatcggagatcccctc
ggaggtttcaaattgagcccggagatgtacgggcacatgacgcactggctgtcggcgctg
gcgaacggccgagtggtgctgagcctcgagggcggctacaacgtcaactcgatcgccaac
gcgatgagcatgtgcaccaaggcgctgctgggcgatccgctgccggcgctcgacccgccc
aaggatccgtgctgcccgagcgcggtccagagtctgcgcctggtcatcgagacgcagcgc
cagtactggccgaatctcgtcttctcggatcgcgccctgccgctcgagtcggcgggcttg
ctgccgaaggcgcgagtgccgcgcgccaagcccactcagcgcctcctcgacggtccaccc
gcggagctaacgacgatccaaaagtccgccgagccacctcgtccgccgtctcctttttta
ccaggcagcacgaccagtttggaggagggtctaaagaaactgagcgtgcgagattgtatc
aatccagaccagcagcagcggcagaacaccagcaacgaaggagcacccggtcgggaggag
gagcagcagaatcaatcctcggccagctcgagcagccaagctccagcaggagcagccgcc
gccacgaccctccaagattaccttcagagcaaccttcgagctctggtggaggagcagatg
ttcgcggtggtgccgctgcgcgactgtccgcacctgcgcgccgcggtcaggcccgtgccg
acgactgggatcgattgcgcgacaccctgcgccgagtgcgccagcaccgccgagaactgg
gtgtgcctgacctgctattccgtgcactgcgctcgaagcgtaaatcaacacgccctggat
catgagagcgtccatcagcacccgctggctctgagcttcagcgacctgtcggtctggtgt
tacgcctgcgaggcgtacatcgacaatccggtcctttacgacgctcgcaacgcggtgcat
ctaagtaaattcaagtacgtgatgccctggacttacgacacacccagaaatcacagtgac
agcgattga
DBGET
integrated database retrieval system
