Trichogramma pretiosum: 106657690
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Entry
106657690 CDS
T07644
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106657690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpre03041
]
106657690
03009 Ribosome biogenesis [BR:
tpre03009
]
106657690
Enzymes [BR:
tpre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106657690
Spliceosome [BR:
tpre03041
]
Complex A
U1 snRNP components
U1 related factors
106657690
Complex B
106657690
Ribosome biogenesis [BR:
tpre03009
]
Eukaryotic type
Pre-60S particles
Helicases
106657690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
106657690
NCBI-ProteinID:
XP_014234807
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MTFSNSTGGSAAAYGGGSSRAAGSSGGDGAGRGGRGTGGGPQRVFGRQGTRYQGGAGGSR
GGPMGSRPSGPGGRSGGPGGRSGGGMRMGSNNANNAGNNLRKPNWDYEDLRPFKKDFYVP
HPNVANRHPSEVQEYRDQHKITLRGEKVPNPIRYFEEGNFPDYVHEGIRRMGYTEPTPIQ
AQGWPIAMSGKNMVGIAQTGSGKTLAYILPAIVHINSQAPLSRGEGPIALVLAPTRELAQ
QIQTVANDFGSLSYVRNTCLYGGAPKGPQARDLERGVEICIATPGRLIDFLERGTTNLRR
CTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRMLAEEYLVEYTQLN
IGSLSLAANHNILQIIDVCQEHEKEAKLGTLLQEIGKVNDEGGKTIIFVETKKKVEDITR
NIRRYGWPAVCMHGDKSQQERDYVLREFRNRKGSILVATDVAARGLDVDDVRYVINFDYP
NSSEDYIHRIGRTGRCSSSGTSYAFFTPQNGRQAKDLINVLKEANQIVNPKLTELAAKGG
GFGGRNRWGYGGNRGRENFSGSHKRFDNRGGYNNYS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgactttctccaacagcactggtggaagcgcggcggcgtacggtggaggtagcagccga
gctgctggtagcagtggtggtgatggcgccggtcgcggaggacgcggtactgggggtgga
ccccaacgcgtcttcggacgtcaaggcacccgctatcaaggtggtgccggtggtagccga
ggtggaccgatgggaagccgcccaagtggccctggaggccgcagtggtggacccggagga
cgcagcggcggtggcatgcgcatgggaagcaacaacgccaacaacgctggtaataatctt
cgcaagcccaactgggactacgaagacctgcgcccattcaagaaagatttctatgtacct
cacccaaatgttgccaaccgtcatccatcagaggttcaagaatatcgtgatcagcacaaa
atcaccctgcgtggcgagaaagttcccaacccaatccgctactttgaggaaggaaacttc
cctgattatgtccatgaaggtatccgcagaatgggttacactgagcctacccctattcaa
gctcaaggttggccaattgccatgtcaggcaaaaacatggtaggcattgctcaaactgga
tctggcaagacccttgcttacattcttccagctattgtccatatcaatagccaagcaccc
cttagccgtggtgaaggccctattgctcttgtccttgccccaactcgtgagcttgctcag
caaatccaaactgtagccaatgattttggctctctctcctatgtccgtaatacttgtctt
tatggaggtgcaccaaaaggaccccaggcccgtgatcttgaacgcggagttgaaatctgt
attgctactcctggtcgtcttattgacttccttgagcgaggcactaccaatctgagaaga
tgcacgtacctcgttcttgatgaagctgatcgcatgttggatatgggtttcgagccccaa
attagaaaaatcattgagcaaattaggccagacagacaagttcttatgtggtccgctact
tggcccaaggaagtaagaatgcttgctgaagaatatctcgttgaatacactcaactcaat
attggatcattatcgttggctgccaaccataatattcttcagattattgatgtctgccag
gagcatgaaaaagaagcaaaactgggaactttgcttcaagaaattggaaaagtaaatgat
gagggtggaaagaccattatctttgttgaaacaaagaagaaggttgaagatatcacaaga
aatattcgccgttatggatggcctgctgtatgtatgcatggtgacaaatcacaacaagaa
cgtgactatgttttaagagaattcagaaacagaaaaggatccatacttgtagcaacagac
gttgctgcccgtggattagacgttgatgatgttagatacgtcataaactttgattacccc
aactcctctgaagactacattcaccgaataggaagaacaggacgttgttctagttcaggc
accagttacgccttctttacaccacaaaatggaagacaagctaaagatcttataaatgtt
ttgaaagaagcaaatcaaattgtcaatcctaaattgacagaactagcagctaaaggaggt
ggttttggaggacgcaatcgttggggatatggtggaaacagaggccgtgagaacttctct
ggctcacacaaacgttttgataacagaggtggatacaacaactacagttga
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