Trichogramma pretiosum: 106657943
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Entry
106657943 CDS
T07644
Name
(RefSeq) vacuolar protein sorting-associated protein 13 isoform X3
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
tpre
Trichogramma pretiosum
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpre04131
]
106657943
Membrane trafficking [BR:
tpre04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
106657943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Peptidase_C48
Motif
Other DBs
NCBI-GeneID:
106657943
NCBI-ProteinID:
XP_014235143
LinkDB
All DBs
Position
Unknown
AA seq
3268 aa
AA seq
DB search
MVFESIVAELLNKVLGEYIQNLNYKQLKLGLWGGDVVLNNLLIKESALDVLNLPIKLQYG
RLGKLVLKIPFTDMWNGQIDAVIEELFILVVPTSQVAYDAEKEAKAQLEAKRAEIARVEK
SKALADTKNQEKVDDSMMEKLIARMIKNIHVEVKSIHVRYEDRVSFKENPFSVGITLNRF
ALESCDSNWSSGNLKDMYAIQQIFKLCIMDGFAVYLNPHPKLFSVDTPTKYIEIFAETIA
TADFLPENYQYLLGPINVKAKLKLNPKPETDGSNYTIPKVWLDLEMQTLRIGLTKRQYQT
IMQMMEGLETARIAAPYRKYRPNLSSYRGHYKEWWKFAYTCILEEQVRRARKNWNWNHIK
NHRDTRRSYAKLYRSKLTTKQPPSDLEDQLADHEKKLDICDLIIIRQQIEMEVEKLIEKE
KNLNANRGWFGFLWGSPKKEDIQELNTAAAIMRKFEEAMTPAEKEKLYRAIDYQENSSPT
YYPESYEEIVTGFFLHGLQILLLDTDRENPEILDLQLTGVKADFKSRPSANAIYTSVSMN
DLKLFGVKQGEKVPSLFNSDKDTELEDGLFYVSYEKNPADKLCGDRIIVKTSSVHIVYDA
QTIIQLIKLFKVQNPSTLNQLQAAAAEQLVNLKGVSALGLEYAIQKHAALDIQVDLKASQ
LIIPHGGFFNGNESLIVINLGSLKVHSLEKPTDSESNLSVKSLVSMGKSEKDILEHLRQH
SYDKFVLKIVNFQALISLSNEDWRDALTSTASPIKVLQPTSLEIQFHKCLITDDPLLPKT
RLIGKLPSVALNITEKRLLEGLAIAQSIPMPEEEVPTELPPRVSISKSVSQMSLFKEFQV
NLPSEKGQEESSASLKQTIDLEAKFVMKEFTVTISKQNKQQKIIPFIRLELLQLEAELMQ
RTFNQEVMLRLGGVQIKQNHDTGEIFMIDTPMSSGSEEYLIIIQFINMNKGSPEFSKLGS
VVNLLQLEFTTLNVLLHQEALINVLQFLSNVQDNVSKATTTVVDLKKEPRVSRVGHLSTI
QEDTSTFIKEQIQRQRGPIKIRRKKAPVEVVDFKITFKIGTISLKMRNDYRDISAFYIEG
ITAGYIMKESHSKANVQLNSVKVKDLNAASIYRNIVSVEGSESLQIEAIMYNVEPDDIDK
NNMSITITMGCHRVVFLNSFVTAVMNFLNNFQAAQQAIAEASAAAAEAARTNIKDVHERA
TRIELSVKLKAPVIYVPMNSKSEHCLMLDMGNLTVSNVLKKIDTVTESGQYPVVDEMNVA
LQNLKLSRVRLNKENFVAENEVLLLQPVSVILLLKRNLSTAWFRKIPDIEMSGRMKKITI
LLNQEDYAMIMSTLDENLGESANDRPVDMKPSHPRPEFRRQLTTEEHTRPSQFKTEVEIA
QEPGTSQDQEQRHVQATIKFEFIMDSLVIQLFTGGSKMLKTQNSPLHLPENSLAKFGLTY
LAVKGQMFANGLLATSILLMNCTLDDTRRNRQGSLVRIMERTSALPDNFCTDDESKPVRS
MLDVTVRKSPTDIFVDVRVFSFSIIVSLDYLMKIKDFFNSNPHETTQQSQAALQASQKAL
QLEAALKRKSVPATPVPVVDTMLTINLHIEKPDIILLEDMDDIDSNCIVLNTEILMKFRM
MGEHQVINGSIKDLSILAGIYNPAKRSDWIYQVIRPINISIAGSTPEGKGLHVDICSTDI
HISVSPGVIEILNRVVQTVIKKEEDSGEVKKQEPNHDGLWIITPFKESDYWFLKTEVAQE
ANEDLQFSDEEENGTPVYKPEVAIVSAPTILLTLEAGIGNKTLPMLLLHLGFQSDIHDWS
TNTMSIEASMSVVMAYYNSRLALWEPLIEPMEAVKNGKRTSTPWELKTKIQFNDMQVDPA
INALSPMSDIEPEEFQQKSKMSIDILSSENLEITVTRTCLDVLKQLGNAFSNAMEVGNKS
STKNAAPYILKNETGLAMILDLENSHFKVAEGEGNVQKNPRASYAEVILESGASVELASK
VKVEIHLLEQLKADTVKDRGIKKFVISFKGIDGKLEIPVLRADKRFFSLKYRKEGSEEWG
IISDVVVEDGSTIVTLRSILQVHNHFCEPVSVYYMTKRGNEVEKVGTVSPDEKLNLPLDA
VYTPTNIYWLFFSIDGYMVSIEPFVWKDLQKTVSMTKVLKCETRSKMDTIEPFYIQAVGE
IEQVYFENTSRHTMASTIYNVHLYPSVYLKNFLPIDIVICLPGNTQERKVEASTTLQIPT
IDPNHSNIVIKLIQYLEKDWSCKVDITANAPEFSVWSFESFDSAQKVIMDLGIHTSYNHG
SIIMALYCPFWMLNKTGLMLSYRKSSKGGKEHSSPIKTTEDHLNVLYHPETFKGPILFSF
RSKVFFGKKKAMVRIEDGEWSDKFSIDVAGSKGVVSCKYNGKVYQIGVHNQLTYNSLTKQ
ITFTPYYVLINDADFIIECQEADRPADPLIKVPPGECAALWPHCELEEKTLKAKVYGHPE
KTAAFIYTDVHSTLLKLDNKYGGINVDVQINEGGVYVSLSAYTPGNAPALIINHTPFPMH
LWEKGSLNVRTIQSYNRMFYTWENPAGPRMLVWEDGNKREIADNLKKDNLGAFIIPDIDQ
EVYYVSFLDGTQRVLLFTPNLKIAEDCQLVGDLEIIDQDITLSIHGVGLSLVNNINRSEL
LYMCIASSGIIWETRKSMNGRWRALNNREVGMIEEGYQRYMRELQVDKETFYRVSLEPKL
EVDYMNMEMLRPHRRFLRRTFQTGLWLQYRTSVHQVQLHAKINRLQIDNQLSDCVFPVIL
APVPPPKSVSQSSIMKPFAELSMVKRLLAHSNVQQFRYFKVLVQEFHIKVDLAFMNALML
YFEADKANDTQESELFKIDMKLVNEPLLHHVNLITTAEQKNFFDLLHFSPLKIHISFSMT
GSGGGPSAVPQVLNVLLQGIGVTITDINDIVFKLAYFERDYVFMTHNQLISEATSHYTGQ
AIKQLYVLVLGLDVIGNPYGLVVGAMKGVEDLFYEPFQGAIQGPSEFAEGLLLGVKSVLG
HTVGGMAGAVSKITGAMGKGLAALTFDKDYQRKRQEQLNKQPANLQEGLARSGKGLVMGV
VDGISGVVMKPISGAREEGVEGFFKGFGKGVVGLVTRPTAGIVDFASGSFGAVRRATDMN
EEAKRVRPPRFLQPDSLVRPYVRDDAEGNKILSELEKGKYANTDVYYFHMFMHKDVLLLT
DKRIAYLEKCDLFGGWKVDWSYTWQEIDPPPIMVDKGIQVCIKDNSRRKKLGGLFGTSDM
VKVLLIPDLPTKQLLCSKMQEQLRQYEL
NT seq
9807 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgaatctattgttgcggaattgctcaacaaagtcctcggagaatatattcag
aatctcaactacaagcagctcaagctcggcttgtggggaggagatgtagttctaaataat
cttttaataaaagaaagtgctttggatgtgctaaatctgcctataaaactacaatatggc
agattgggcaaattagtactgaagatcccattcactgatatgtggaatggtcaaattgat
gctgtaatagaagaattatttattctagtagttccaactagccaagtagcttacgatgca
gaaaaagaagccaaagcgcaactggaagcaaagcgagcagagattgctagggtggaaaag
agtaaagctttagctgacacaaaaaatcaagaaaaggttgatgattcaatgatggaaaaa
ctcatagcacgaatgataaaaaatattcatgtagaagttaaaagcatacatgtaagatat
gaagatcgagtgagtttcaaagaaaatcctttttccgttggaattactctcaatcgtttt
gctcttgaaagttgtgattctaactggtctagtggcaatctcaaggatatgtatgccatt
caacaaattttcaaattatgcataatggatggatttgctgtgtacttgaatcctcatcca
aaattattcagtgtagacacaccaacaaagtatatagaaatatttgcggaaacaatagct
acagctgattttttaccagaaaactatcaatacttactgggtccaataaatgtcaaagca
aaacttaaacttaatcccaagccagaaacagatggcagtaattataccataccaaaagtt
tggttggatctagaaatgcaaacattgagaataggtttaacaaaacgtcaatatcaaact
attatgcagatgatggaaggtttagaaacagctagaatagctgcgccttataggaaatac
agaccaaatttatcaagttatcggggacattataaagaatggtggaaatttgcatacact
tgcatattggaagaacaagtaagaagagcccgtaaaaattggaactggaatcatattaaa
aatcaccgagatactcgtcgaagttacgctaaactgtatcgttcaaaattaactacaaaa
cagcctccgtctgatcttgaagaccaattagctgatcacgagaaaaaattggatatttgt
gatctaattataataagacaacaaattgaaatggaggttgaaaaactaattgaaaaagaa
aaaaatcttaatgctaatcgtggatggtttggtttcttatggggctcgccgaaaaaagaa
gacattcaagagctcaatactgctgcggccataatgagaaagtttgaggaagcgatgaca
ccggcagaaaaagaaaaattatatcgagctatagattatcaagaaaactcatccccaacg
tactatcctgaatcttacgaagaaattgtaacaggcttctttttgcacggcttgcaaatt
ttgttacttgatacagatcgtgaaaacccagaaattttagacttacaattgactggggtt
aaagctgacttcaaatccaggccatcagctaatgccatttacacctcagtgtcaatgaac
gatttgaagttgtttggtgtcaagcagggagaaaaagtgccttcattattcaattcagac
aaagatacagaattggaagatggtttattttatgtgtcctatgagaaaaatcctgctgat
aaattgtgtggggatagaataattgttaagactagttctgtacatattgtttacgatgca
cagactataatacaacttattaaattattcaaagtacaaaatccttctactttaaaccaa
ttgcaagctgctgctgcagaacaactagtcaatctgaagggagtatcagctttaggtcta
gagtacgcaattcaaaaacacgcagccttggacatacaggttgatttgaaagcgtcgcaa
ctcataataccgcatggaggtttttttaatggtaacgaatccttaattgtgatcaacctt
ggtagtctcaaagtacattctctggaaaagcctacggatagcgaatctaatttaagcgtc
aagtctctagtcagcatgggaaagagcgaaaaagatattttagaacatctaagacaacac
agttatgataaatttgtattaaaaatagttaattttcaagctcttatttcgttgagcaac
gaagattggcgagatgctttaaccagtacagcgagcccaataaaagttttgcaacctacg
tctttggaaattcaatttcacaaatgtctcatcacggatgatccattgcttccgaaaacg
agactcataggaaaactgccatcggtcgcattaaatattactgaaaaacgattacttgaa
ggtcttgcaattgctcaaagtattcctatgccggaggaagaagttcccacagaactgcca
ccgcgagtttcaatatcaaagtcagtgtctcagatgtcgttgttcaaagaattccaagtt
aatcttccatccgaaaaggggcaggaagaaagctctgcttcgttgaaacaaacaattgat
cttgaagcaaaattcgtcatgaaagaatttactgtgacaatatcgaaacaaaataaacaa
caaaaaatcattccattcataagactcgaattgttacaacttgaagctgagttgatgcaa
cgaactttcaatcaagaagtcatgcttagattaggaggtgttcaaattaaacagaatcat
gataccggtgaaatattcatgatcgacacgcccatgtcatctggaagcgaggaatatctt
attattatacaatttatcaatatgaataaaggatcaccagaattttccaaattaggttca
gttgtgaatttacttcaattagaattcaccacgttaaacgttttattgcatcaagaagct
ttgataaatgttcttcaattcttgtctaatgttcaagataatgtcagcaaagcaacgact
accgttgtagatctcaaaaaagaaccaagggttagtagagttggtcatttatcaaccata
caagaagatacttcgacattcatcaaagaacagattcaacgacaacgtggaccgataaaa
attcgtcggaaaaaagctcccgtcgaagtagtggattttaaaataacatttaaaattggt
actataagtttgaaaatgaggaatgattacagagatattagtgcattttacatagaaggt
attacagctggatatattatgaaggaatcacattccaaagcaaacgtacaattaaattct
gttaaagtaaaggatcttaatgcggcttcaatctacagaaatattgtgtcagtagaaggt
tctgaatcgttgcaaattgaggctatcatgtacaatgttgaaccggatgatattgacaaa
aataatatgtctatcacaataacaatgggttgtcacagggttgtatttttgaattctttt
gtaacagctgttatgaattttctgaataacttccaagctgctcaacaagccatagccgaa
gcatcagcagcagctgctgaagccgctagaacgaatatcaaagatgtacatgaacgtgcc
actcgtattgaactatccgtcaaattaaaagcaccagttatatatgtaccaatgaactca
aaaagtgagcactgcctcatgttagatatgggtaatcttaccgtaagcaatgtgctgaaa
aaaatcgatactgttaccgaatcaggccaatatcctgtagtagatgaaatgaatgtggct
ttacaaaatttgaaattatctcgggtacgcctgaacaaggaaaattttgttgctgagaat
gaagtcttgcttcttcaaccggtcagcgttatacttctgttaaaacgcaatttatcaacc
gcttggttccgaaagataccagatatcgaaatgtctggtaggatgaaaaaaattaccatc
ctcttgaatcaagaagattacgccatgatcatgtccactctcgatgaaaatctaggagag
agtgctaacgatcgacctgttgatatgaaaccatcccatccgagaccagagtttaggagg
caattaactacagaggaacacacaaggcccagtcagtttaaaacagaagtagaaatcgca
caagaacctggaacgtcgcaggatcaggagcagcgtcacgttcaggcaaccattaaattt
gaatttattatggatagtttagtcattcaattatttactggtggttccaaaatgttgaaa
acacaaaattcacctctgcatctaccagaaaactcgttggcaaaattcggactgacttac
ttagcggtcaaaggtcaaatgtttgccaatggtcttttagccacatccatcctattgatg
aactgtacgttagacgatactcgtcgaaatcggcagggttctttagtgcgtattatggaa
cgaactagtgcgttgccagataacttttgtacggatgacgagtcaaaaccagtgagaagt
atgttggacgtaactgtgagaaaaagtcctaccgatatctttgttgacgttcgagtattt
tcattcagtatcatagtttctcttgattacctaatgaaaatcaaagattttttcaattcg
aacccccatgaaacgacgcagcaatcgcaagctgctctgcaagcatcacaaaaagcatta
cagttggaagctgcgttaaaacgaaaatctgttccagcgactccagttcctgtggtcgat
accatgttaactattaatttacatatagaaaaaccagacatcatattactggaggatatg
gatgatatcgattctaattgtatcgtacttaacacggagatattaatgaaattccgaatg
atgggcgagcatcaagttataaatggctcaatcaaagacctttctattctcgctggcatt
tataacccagctaaacgatctgattggatatatcaagtaattagaccgataaacatcagt
attgctggttcgacgccagagggtaaaggattacatgtagatatttgtagtactgacatt
cacatctcagtttcaccgggcgtcatcgaaattttaaatcgagttgtacaaactgtaata
aaaaaagaggaagattctggtgaagttaaaaaacaagaacctaatcacgatggtctttgg
atcattactccattcaaggaaagcgattattggtttttgaaaacagaagtagctcaagaa
gcgaatgaagatcttcaattttctgacgaagaagaaaatggaacaccagtttataagcca
gaggtagcaattgtttcagcaccaacaatattacttacccttgaagctggtatcggtaat
aaaacgttacctatgctgcttttgcatttaggttttcaaagtgacatacatgattggagt
accaatacgatgagcatcgaagcatcgatgtctgtagttatggcttattacaatagtcga
ttggctctgtgggaaccacttatagaacccatggaagcggttaaaaatggaaaacgtact
tctacgccctgggaactaaaaacgaaaattcaatttaatgatatgcaagtcgatccggct
attaatgctcttagcccaatgtcagatatagagccagaagaatttcagcaaaaatcaaaa
atgtccatcgatattttgtcatcagaaaacttagagataacagtgacaagaacttgttta
gatgtattaaaacaacttggtaatgcattttctaatgccatggaagtaggtaacaaatca
tctacaaaaaatgctgctccttacatattgaaaaatgaaaccggattagctatgattttg
gatttagaaaatagtcatttcaaggtagcagaaggcgaaggtaatgttcagaaaaatcct
cgcgcatcctatgctgaagtaattttagagtctggagcttccgtagaacttgcgtccaaa
gttaaagttgaaatacacttattagaacaattaaaggctgacacagtaaaagatcggggc
attaaaaagttcgtcatatcattcaaagggatcgatggaaaactagagattccagttcta
cgtgcagacaaacgatttttctctttaaaatatagaaaagaaggttcggaagaatggggt
atcatatccgatgttgttgtcgaagacggtagtactattgtgacgttgagaagtatctta
caggtacacaatcatttttgtgaaccagtatcagtttattatatgacaaagcgtggtaac
gaggttgaaaaagttggcactgtttctcccgacgagaagcttaatttaccattagatgct
gtttatactcctaccaatatctactggctcttcttcagtattgacggatacatggtatca
atagaaccattcgtctggaaggatcttcagaaaactgtttcgatgacgaaagttttaaaa
tgcgaaacgcgctccaaaatggacacgatcgagcccttttacattcaggctgttggtgaa
attgagcaggtttacttcgaaaatacatcgcgacacacaatggcaagcaccatctacaat
gtccatctttatccatcggtatatttgaagaacttccttccgattgacatcgtcatatgt
ctgcctggaaacacacaagaacgaaaggttgaagcaagcactacgttacaaatacccaca
atcgatcctaatcattccaacatcgttattaaactgatacaatatttggaaaaagactgg
tcatgcaaagtggatataacagccaatgctccagaattttcggtttggtcatttgaatca
tttgacagtgcacagaaagtcattatggatttgggcatacacacatcgtataatcacgga
tcaataatcatggcactctattgtcctttctggatgctgaataaaactggtctcatgctt
tcttaccggaaatcaagtaaaggtggcaaagagcactcaagtccgatcaagactacagag
gatcacctgaacgtgttatatcatccagagacgttcaaaggcccgattttattttcattt
agatccaaggtatttttcggcaaaaaaaaagccatggtccgcattgaagatggtgaatgg
tcagataaattttccatcgatgtggctgggagtaaaggtgttgtatcatgtaaatacaat
gggaaagtctatcagattggcgttcataatcagctcacgtataattcgttaacaaaacag
ataacattcacgccatattacgtgttgatcaatgatgcagacttcataattgagtgtcaa
gaagctgatcgccccgctgatccactcatcaaagtgccacctggtgagtgcgctgccttg
tggccgcattgtgagctagaggaaaaaacattaaaagctaaagtttacgggcatccagaa
aaaactgctgcctttatttatactgacgtccacagtactctgctaaagctcgacaacaag
tatggtggcattaacgttgatgtacagataaacgaaggcggagtttacgtatcgctctcg
gcttacactccgggtaatgcaccggctttgataatcaaccacaccccatttccaatgcat
ctatgggaaaaaggctcactaaacgtgcgaacgatacagtcgtataaccgtatgttttac
acctgggaaaatccagcagggccaagaatgctcgtttgggaggatggaaataaacgcgaa
atcgccgataatcttaaaaaagataatttaggagcctttattatacccgatatcgatcaa
gaagtttattacgtgtcttttctcgatggtactcaaagagtattgcttttcacgcctaat
ctgaagatcgctgaagattgtcaattggttggcgatctcgaaatcatcgatcaggacata
actctaagtattcatggagttggattatcattggtaaataatatcaatcgatcggagctt
ctgtatatgtgcatcgcaagttctggaattatttgggaaacgagaaaatcgatgaatggt
agatggcgtgctttaaacaatcgagaagtaggaatgatcgaagaaggatatcaaagatat
atgagagagcttcaagttgataaagaaacgttttatcgagtttctttggaaccaaaatta
gaagtggactatatgaatatggaaatgttaagaccccatcgacgatttttacgtcgtact
ttccaaaccggtctctggttacagtatcggacttcggtacaccaagttcagttgcatgct
aaaatcaaccggttacaaattgataatcaattatcagattgcgtatttcctgttatattg
gcgcccgtacccccgcccaaaagtgtctcccaaagttcaattatgaagcctttcgccgaa
ctgagtatggtcaaacgtttgctagctcacagtaatgttcaacaatttcgttattttaaa
gtgcttgttcaagagttccacattaaagttgatttagctttcatgaacgcgctcatgcta
tattttgaggccgataaagctaatgatacccaagagagtgaattattcaaaatcgatatg
aaattggtaaatgagcctttgctacaccatgttaacttgatcacgacagccgagcaaaag
aatttcttcgacttgttacatttttcaccacttaagattcacataagtttttcgatgact
ggaagtggaggtggcccttcagcagtaccccaagtacttaatgtacttcttcagggtatt
ggtgttaccataactgacataaatgatattgtcttcaaattggcgtactttgagcgtgac
tacgtatttatgactcacaatcaacttatatccgaggctaccagtcactacactggccaa
gctataaaacaactttacgttttagttcttggtcttgatgttataggcaatccttatggt
ttagttgttggagctatgaaaggtgtggaagatcttttttatgaaccattccaaggtgcc
attcaaggaccaagcgaattcgctgaaggtcttttgcttggggtcaaaagtgtgctaggt
catactgtaggtggtatggctggtgctgtatccaaaattactggagcaatgggcaaagga
cttgctgctttaacgtttgataaagattatcaaagaaaaagacaagaacaattaaataag
caaccagctaatctacaagagggtttggctagaagtggaaaaggacttgttatgggggtc
gttgatggtatatcaggagttgttatgaagccgatttcgggtgctagagaagagggtgta
gaaggatttttcaaagggtttggcaaaggagttgttggtcttgttacgagaccaactgca
ggtattgtggactttgccagtggttcatttggagcagttagaagagcaacagatatgaat
gaagaagcaaaaagagttagacctccccgctttttgcagcctgacagtttggttagacct
tatgttcgcgatgatgctgaaggaaacaagatacttagtgagctagaaaaagggaaatat
gcaaataccgatgtttattattttcacatgtttatgcacaaagacgtacttttacttact
gataaaagaatcgcgtaccttgaaaaatgtgatttatttggtggttggaaggttgattgg
tcttacacttggcaagaaattgatccacctccgattatggttgacaaaggaattcaagtg
tgtataaaagataacagtagaagaaagaaacttggaggattatttggaacttcagatatg
gtaaaggttcttctcatccctgacttaccaacaaaacagctactatgcagcaaaatgcaa
gagcaacttcgacaatatgaactttag
DBGET
integrated database retrieval system
