Trichogramma pretiosum: 106658372
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Entry
106658372 CDS
T07644
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106658372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpre03041
]
106658372
Spliceosome [BR:
tpre03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106658372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
PRP4
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
WDR90_beta-prop_4th
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_SPT8
WD40_like
WD_LRWD1
Beta-prop_HPS5
WD40_RFWD3
Nbas_N
Motif
Other DBs
NCBI-GeneID:
106658372
NCBI-ProteinID:
XP_014235768
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MSDDEDIHYVKKQKTVHYGSLEESERARIAALDESNSDDDSRDGQEAFKRPANVHISNEY
MELEASMSKDRQALLEEFERRKKARQINVSTDDSEVKKNLRQLEEPICLFGEGPADRRNR
LRELLSCLGEDAIKRKDDDERVAQPEKDPETTWYHEGPDSLRVARLWISMYSVKRAKLRL
EEARKERDVPAATKTARRQELLKKLQAQSIYCSQIGDTRPISCCTFSPDSKTLATASWSG
LCKLWSVPDCTELRTLKGHGCNVGCITFHPKAGTTEDIFDESASKTCILASCASDGSVKL
WGGGKGEEPLANVEGHEPHRVSRLAFHPSGRFLGTCCYDSSWRLWDLEQKAEVLHQEGHT
RPVHCMSFQIDGSVVATGGQDSFGRVWDLRTGRCIMFMEGHLKSIYGIDFSPNGYHLTTG
SDDNSCRIWDLRKRACLYSIPAHTNLISDVKYQKGEGQFLITASYDNTAKIWSSNTWQPL
KTLPGHDGKVMSVDVSSDGKYIATTSFDRTFKLWAPDL
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgacgaggatattcattacgttaaaaagcaaaaaactgtccattacggctca
ctcgaagagtctgagagagctcgtatagctgcactcgatgaaagtaattctgatgatgac
agcagagatggacaagaagcattcaaaaggccagccaatgtccatatatctaatgagtat
atggagttggaggcgagcatgtcaaaagatcgacaagctctattggaagaattcgaacga
agaaaaaaagccagacagataaatgtgtcgacagatgattcagaagttaaaaaaaatttg
aggcaattagaagagcccatttgtttatttggtgaagggccagctgacagaaggaatcgt
ctgcgtgaattgttgtcgtgtttaggggaagatgccattaaaagaaaagatgacgatgag
agagtagcgcaacctgaaaaggatccagaaacaacttggtaccatgaaggtcctgattca
ctcagagtagcacgattatggatatcaatgtattctgtgaaacgagccaaattgagatta
gaagaagcccgcaaagagcgtgatgttcctgcagctactaaaaccgccagaagacaagaa
cttcttaaaaaactacaagcacagagcatatattgctctcaaataggagatacaaggcct
atatcatgttgcacattcagtcctgactcaaaaactttagcgacagcctcttggtcaggt
ttatgcaaattatggtctgtaccagactgtactgaattaagaacactgaaaggtcatggt
tgcaatgtaggttgtatcacatttcatccaaaggcgggtactacggaagatatatttgat
gaaagtgctagtaaaacgtgtatactagctagttgtgccagtgatggttctgtcaaactt
tggggaggtggaaaaggtgaagaacctttagcaaatgttgaagggcatgaaccacataga
gtttcaaggctagcttttcacccatctggtagattcttaggaacttgctgctatgattct
tcatggcgtttatgggatttagaacagaaagctgaagttttacatcaggaaggacataca
aggcctgtacattgtatgagttttcaaatagatggttctgtagtagctactggtggtcaa
gactcttttggaagagtctgggatttacgtactggtagatgcatcatgttcatggagggc
catttgaaatctatttatggcatagacttttctccaaatggttatcacttgactactggt
tctgatgacaattcttgcagaatttgggatcttagaaaaagagcttgtctatattctatc
cctgcacacactaatttgatatcagacgttaaatatcaaaaaggtgagggtcaatttttg
atcaccgcttcttacgataatactgcaaaaatctggtcaagcaacacttggcaaccactg
aaaaccttacctggtcacgatggtaaagtgatgtcagttgatgtatccagtgatggaaaa
tacatagcaactacgtcctttgataggacctttaagctatgggcaccagacttataa
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