Trichogramma pretiosum: 106658663
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Entry
106658663 CDS
T07644
Name
(RefSeq) exosome component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106658663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106658663
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
106658663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
Motif
Other DBs
NCBI-GeneID:
106658663
NCBI-ProteinID:
XP_014236203
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
MAQNSSDSVDQNQFEKKFEDFKKIALDVITNGCTASDELPCDRDFHYYKCYPTFNEIREK
HTKRISNIMQCIVKQAGVDTNIISNNINEKYNILLESNDILLNRAEAYMDIEQSTSQNTP
TNFLVVERQISYNENNFLSKNDEISSKTHPATQTLRLFTCENVPKPQFQFKDKIENSYRP
WKPRIKNKPNSITPLAIHKVQGEDGFEYYSHPYEFELNQFKPHEIHLQRRQPIKCKSIEE
TPLIIINDTASLRAMVDNLKIYNEIAIDFKEHTYRTFQGIICLMQISTFDTDYVIDALTL
RSELHMLNVIFTNTSILKVFHGSHSDICSLQRDLSLYVVNMFDTHLAAKDLQLPLFNLPY
LLDIFCNINPDRYFQIVDWRVRPLPEELTKYAQKDIHYLLYLKDILRNALIDKDNGLDSI
LKNVFTNSTISCKKVYKKEVYTDNSYIRMYKKSRKNFNSKQLNVLKELHKWRDETAREED
ESYHMVLPDHMLIKIAETLPENEHGIFACCDKIPPLIRQNVMIIHKLISNARDQPFETTD
KLLMQNNQLNDSNSWNTSSPDLISGMTIQQNLPCMLSSTAFNNSKTETEKNLPFFVSPGK
KYKLIPSTATEESVLIVNPFFKKNEDISTAETQEETLPPNHSALNTSIDALLSSTASSQL
EKRKEEETRNEEVTEGKIIYKKKSARYFNYTLDEINEMHDKHDFKDDKNKSNNPGVEFKK
QINWLDICNMSEKPITKTELRKKMIEGSKEQRSVKTQKMNGNETSSPSYIPISNKKGKSI
PKGKKFQEMLSIIRNSDEQSANSSQNSKNKKKKKKFWRKGKIRMNVMEFETLGQMHGRKR
RRQVSFD
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaattcatctgacagtgtagatcagaatcagtttgaaaagaaatttgaagat
tttaaaaagattgcattggatgtcattacaaatggatgtacagcatctgatgaattacca
tgtgatagagattttcactactacaagtgttacccaacatttaatgaaataagggaaaag
cacactaaaagaatctccaatattatgcaatgcatcgttaaacaagcaggagtagataca
aatattatatcaaacaacattaatgaaaaatataatatacttttagagtcaaatgatatt
ttgcttaatagagcggaagcttatatggatatagaacaaagcactagtcaaaatacaccc
actaactttcttgttgttgagaggcaaatatcatacaatgagaataattttttatcaaaa
aatgatgaaatttcttcaaaaactcatcctgcaacgcaaactttaagattatttacttgt
gaaaatgttccaaaaccacaattccaatttaaggataaaattgaaaatagttatagacca
tggaaacctaggattaaaaataaaccaaattcaattactcccttagctattcataaagta
cagggggaagatggatttgaatattatagtcatccttatgagtttgagttaaatcaattc
aaaccacatgaaatacacttgcagaggaggcaaccaattaaatgtaaatctattgaagaa
actccgctaattattattaatgatacagcaagtcttagggccatggtagataatttaaaa
atttacaatgagattgcaattgattttaaagagcacacttatagaactttccaaggtatc
atttgcttaatgcaaatatcaacttttgatactgattatgtaattgatgcattaactctc
agatccgaattacacatgttaaatgttatctttaccaatacaagcattcttaaagtattt
catggatctcattcagatatttgttcattacaaagagatttatctctttatgttgttaat
atgtttgatactcacttagctgcaaaagatttgcaacttccactatttaacttaccttat
ttacttgatattttttgcaatattaatcctgatagatattttcaaatagttgattggcgg
gtaaggcccttacctgaggaactgacaaaatatgcccaaaaagacatacattatttgctg
tacctaaaagatatcttaagaaatgctttaattgataaagataacggcctagatagtata
ttgaaaaatgtatttaccaatagcactattagttgtaaaaaagtatataaaaaagaagtt
tatactgacaacagttacataagaatgtacaaaaaaagtagaaaaaattttaatagcaaa
caactcaatgtattaaaagaattgcacaaatggagagatgaaactgcaagagaagaagat
gaaagttaccatatggttttaccagatcatatgttaataaaaattgcagagactctgcca
gagaatgagcatggaatctttgcatgctgtgataaaataccaccccttatcagacaaaat
gtaatgataattcataaattaatttcaaatgcaagagatcaaccttttgaaacaacagat
aaattattgatgcaaaacaatcaattaaatgattcgaactcatggaatacatcctcccct
gatttgataagtggaatgacaattcaacaaaatttaccgtgtatgctatccagtactgca
tttaacaattcaaaaacagagacggaaaaaaatttaccatttttcgtgagtcctggtaaa
aaatataaactgattccgtctacagcaacagaggaaagtgtactaatagtcaatccattc
tttaaaaaaaatgaggatatttctacagccgaaacacaagaagaaactctacctcccaat
cattctgcacttaatacatctatcgatgcacttttaagttcaactgcaagttctcaatta
gaaaaacggaaagaagaagaaactagaaatgaagaagtgacggaaggcaaaataatttat
aagaaaaaatctgcaaggtatttcaattacacattggatgaaattaatgaaatgcatgat
aaacatgattttaaagatgataaaaataagtcaaataatcctggagtcgaatttaaaaaa
caaataaactggcttgacatatgtaacatgtctgaaaagccaattactaaaactgaatta
agaaaaaaaatgattgaaggaagtaaagagcaacgatcggttaaaacacaaaagatgaat
ggaaacgaaacttcgtctcccagctatatacctattagtaacaaaaaaggcaaaagtatt
ccaaaaggaaagaaatttcaagaaatgttatctataattcgaaattcagacgaacaatct
gccaattcatctcaaaattcaaaaaataagaaaaaaaaaaagaaattttggcgcaaaggt
aaaattcgaatgaatgtgatggagtttgaaacattaggacaaatgcatggtcgcaaacgt
agacgtcaagtcagttttgattga
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