KEGG   Trichogramma pretiosum: 106659030
Entry
106659030         CDS       T07644                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
tpre  Trichogramma pretiosum
Pathway
tpre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106659030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpre03041]
    106659030
Spliceosome [BR:tpre03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    106659030
 Complex C
   U5 SnRNP specific factors
    106659030
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_EIPR1 WD40_MABP1-WDR62_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_DCAF4 WDR90_beta-prop_4th eIF2A Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N WD_LRWD1 MIOS_WD40
Other DBs
NCBI-GeneID: 106659030
NCBI-ProteinID: XP_014236799
LinkDB
Position
Unknown
AA seq 350 aa
MPIADKRKGDDILSLVPASKKTRNEVVFSSREKAVVQSGPPRTSSLNSPTMLLEGHQGDI
FSVEFHPEGQYLASSGFDRQIFLWNVYGECENLSVLTGHSGAILEMHFSTDGNTLFTAST
DTTLGIWDIMAGTRIKKLKGHTSFVNSVCGTRRGVTQLCSGGDDSTIRIWDPRKKTHCSL
LNNTYQVTAVAFNDTAEQVISGGIDNELKVWDLRKNEILYKMKGHTDTVTGLALSPDGSY
ILSNAMDNSLRIWDIRPFAPFERCTKVFSGHQHNFEKNLLRCAWSTDGSRVSCGSSDRFH
YIWDTNSRRILYKLPGHNGSINDVDFHPKEPIICSGSSDKQIYIGEIEDQ
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgccaatagctgataaaaggaagggtgatgatattctctcacttgtgccggcatctaaa
aaaacgagaaatgaagtggttttcagcagccgagaaaaagctgtcgttcaaagtggtccg
ccaagaacatcgtctttgaattcacccactatgctattggaaggtcatcaaggagatata
ttttctgttgaatttcatccagaaggtcaataccttgcatcaagtggttttgacagacaa
atattcttgtggaatgtatatggagaatgtgaaaatctgtcagttttaacgggccacagt
ggcgctattttagaaatgcattttagtacagatggaaacacattatttacagcaagtaca
gatacaactttgggtatttgggatataatggcaggaacaagaataaaaaaattgaaaggt
catacatcatttgttaactctgtttgtggaacaagacgaggagtcactcaactttgttct
ggaggtgatgactctactatcagaatctgggatcccagaaagaaaactcattgtagtctt
ttgaacaatacatatcaggtaacagctgttgcatttaatgacactgctgaacaagtaatc
agtggcggtattgataatgaacttaaagtatgggatttaagaaagaatgaaattctgtac
aaaatgaaaggacacaccgatacagtaacaggattagctttgagtccagatggctcttat
attctttctaatgcaatggacaactcattgagaatttgggatatccgaccatttgcacct
tttgaaagatgcacaaaagttttctcaggtcatcagcataattttgagaaaaatttacta
agatgtgcttggtcaactgatggaagtagagtatcttgtggatcatcagacagatttcat
tacatttgggatacaaatagtcgaaggattctttacaaactacctggacataatggatct
attaatgacgttgattttcatccaaaagagccaattatatgttctggttcaagtgataag
caaatttatattggtgaaattgaagatcaatga

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