Trichogramma pretiosum: 106659170
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Entry
106659170 CDS
T07644
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
tpre
Trichogramma pretiosum
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpre03009
]
106659170
03012 Translation factors [BR:
tpre03012
]
106659170
Enzymes [BR:
tpre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
106659170
5.6.2.5 RNA 5'-3' helicase
106659170
Ribosome biogenesis [BR:
tpre03009
]
Eukaryotic type
Other ribosome biogenesis factors
106659170
Translation factors [BR:
tpre03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106659170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
ResIII
zf-AN1
Viral_helicase1
SLFN-g3_helicase
SMUBP-2_HCS1_1B
AAA_22
DEAD
PIF1
T2SSE
nSTAND3
Helicase_RecD
Flavi_DEAD
UvrD_C_2
NPHP3_N
cobW
AAA
PhoH
AAA_16
ABC_tran
Mg_chelatase
TrwB_AAD_bind
CbiA
SRP54
YqeC
AroM
Motif
Other DBs
NCBI-GeneID:
106659170
NCBI-ProteinID:
XP_014237056
LinkDB
All DBs
Position
Unknown
AA seq
906 aa
AA seq
DB search
MDINITKFVRKHLDLLFLEREENLIALFQDLSPANLYKLEQRGQALTKLSVTNIAVKGSD
RYQVDLEREDGLPLEHGLSSGDLIICIRSKEKGHSVKGIVIEVGETSLSINTNESYEDLA
EEELFTIVKTDSDFTYKAQTRALSSLEKKEVYSSRFLNLVKLLFNEDEAETQELLTLEDP
IPKSCSDIDGNLKFKNANLAEDQKKAVCFTLKRRHFAIIQGPPGTGKTTTLIEIIRQLHA
AEKKVLICAPTNVAVDNLTIRLGETEAKPLRLGHPTRIAKDALKYSLDSFLERDDGYSIL
RDIKRSIKALETSIANTGATYKYREIKDLKKEFRKRLKRLTSDVLQRSSVILCTLNSASA
IDGQLQNIPKEHFDVLIVDEASQAMEASMWIAIPNAPKLVLAGDINQLPPVVMCQKAVED
GLNISLMERAIKKLGKYCYISLTKQYRMNEKIMVWSSTKFYDNTLIADKLVKDHLLKDLP
FVQNDNTLTSEAVVYIDTCGCECEEYNTGVEKASKGNLGEAVIVDKVVSSLIKSGLPHSS
IGVITPYSLQVDFIGRSFRSRSIKVEVSTVDGFQGREKEVIILSLVRSNEDRELGFVTDF
RRLNVAVTRARRLLIVIADSETMEKDELIESLLKHIGDNGLLQTAEEYLTESIDKEIEKI
EKSAQDGKKLKIKNNFPASKASKREIKSDKNNLSSAIEKIKIDDTLQGNKEVPKLGKKTE
DLSSCDNRKTYNVFETIAAADGVNQEEDDIEKVSNELSDVKIIEETSVASSISKTSKSRK
KKSKAKKCNDSEIGNEVTESKETDNEFEKLVAQFTVNQDICAYDGCKISTKLIKLDCQFC
KKRYCIKHAMQEIHGCEKEIRQKCRKDFRHPKPDPCTSHDKNRFAKKLKEMEDSRKAKKK
LTKNKG
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggatattaacatcactaaatttgtacgtaagcatttggacttactttttcttgagcgg
gaggaaaatcttatagctctgttccaagatttatcaccggctaatttatacaaattggaa
caaagaggacaagctctcactaaattatctgtaactaatattgctgtcaaaggatcagat
cgttatcaagttgatttagaacgcgaagatggtctacccttagagcatgggttatcttct
ggtgatttaattatttgcatcagatccaaagaaaaaggccacagtgtcaaaggaattgtt
attgaagtcggagaaacttctctaagcattaacaccaatgaaagttatgaagatttggct
gaggaagaactttttactattgttaaaactgattcagatttcacatataaagcacagaca
agagcgctaagttccttagaaaaaaaagaagtatattcctcaagatttttgaatttagtg
aaactattatttaatgaagatgaagcagaaactcaagaattattaactcttgaagatcct
attccaaagtcatgctcagatatagatggaaatctaaaatttaaaaatgcaaatttagct
gaagatcagaagaaagcagtatgttttaccttaaaaagaagacattttgcaattattcaa
ggaccccctggcactggtaaaacaaccactttaatagaaataataaggcaattgcatgct
gctgagaaaaaggttttaatatgtgctccaactaatgtggcagttgataacttaacaatt
cgcctgggagaaacagaagcaaaacctttgagattaggacatcctacaagaatagcaaag
gatgctttaaaatactctcttgattcatttttagaaagagacgatggttatagtatttta
agagatattaaaagatctataaaagcattagaaaccagtatagcgaatactggagctact
tacaagtatagagaaattaaggatttgaaaaaagaatttcgaaaaaggttgaagagacta
acttcagatgttttacaaagatcttcagtcattttatgcacattaaattctgcttctgca
attgatggtcaacttcaaaatatacctaaagagcattttgatgttttgattgttgatgaa
gcatcccaggcaatggaagcttccatgtggatagcaattccaaacgctccaaagctcgta
ctcgctggagatataaatcaattgcctccagtagtaatgtgtcaaaaagctgtagaagat
ggtctgaatatcagtctcatggaaagagccattaaaaaacttggaaaatattgttacata
agtttgacaaagcaatatagaatgaatgaaaaaatcatggtatggtcaagtacaaaattt
tacgataatactttgattgctgataagttagtgaaagatcatttgctgaaagatttacca
tttgttcaaaacgacaatactcttacaagcgaggctgttgtatatattgacacttgtggt
tgcgaatgtgaagaatacaatacaggtgtagaaaaagcatcaaaaggaaatcttggtgaa
gctgtgattgtcgataaagtggtttcttcattaattaaatccggtttaccacactcaagt
attggagtcattacaccttactcgttacaggtcgattttatcggacgatcattcagatcc
aggtcaattaaggttgaagtaagcactgtcgatggatttcaaggccgtgaaaaagaagta
attattctttcgctcgttagaagtaacgaggaccgagaattgggtttcgttaccgatttt
cgtcgcctcaatgtcgcagtaacgagagcgcgcagattattgatagtgatcgctgacagt
gaaacaatggaaaaggatgaacttattgaaagtttgttgaagcacattggagacaatgga
ttgctgcaaacagctgaggagtatttgactgaaagtattgataaagagattgaaaaaatt
gaaaaatctgcgcaagatggtaagaagctgaaaattaaaaataactttcccgcgagcaaa
gcttcgaagagagagattaaaagtgacaagaacaatttatctagtgcaattgaaaaaatt
aaaattgatgacacgctgcaaggaaataaagaagttccaaaattgggtaaaaagacagaa
gatttgagtagttgcgacaatcggaaaacttacaacgtctttgaaaccattgctgcagcg
gatggagtcaatcaagaagaagatgatatcgagaaggtaagtaatgaactatcagacgta
aaaattatcgaagagacgtcagttgcctcaagtattagtaaaaccagtaaaagccgaaaa
aagaaaagtaaagcaaaaaaatgtaatgattctgaaattggaaatgaagtcactgagagc
aaagagactgataatgaattcgaaaaacttgtcgctcaatttactgtcaatcaagatatt
tgcgcttatgatggatgcaaaatatcaaccaaattgataaaactcgactgtcaattttgc
aaaaaaagatattgtatcaagcatgcaatgcaagaaattcacggttgtgaaaaggaaata
cgtcaaaaatgtcgcaaagattttcgacatccaaagcctgatccctgcacttcacatgac
aaaaataggtttgctaaaaaattgaaggaaatggaagattcaagaaaagcaaaaaaaaag
ttaacaaaaaataaaggataa
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