Trichogramma pretiosum: 106659295
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Entry
106659295 CDS
T07644
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
tpre
Trichogramma pretiosum
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpre03041
]
106659295
Enzymes [BR:
tpre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106659295
Spliceosome [BR:
tpre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106659295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
CMS1
MOEP19
Motif
Other DBs
NCBI-GeneID:
106659295
NCBI-ProteinID:
XP_014237236
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MSWTNSNRRNNYRNDSRGNYNNNDRRQDRRQDNFSSQESGHQMYVPSQHLGKLIGRAGSQ
IKEFQEKTNTKILVKKECTQGDSTLIEIIGDTENQTEAVNAISNLLNLGNNATQSYGDHG
FKENALEDTKPSAVDIDWDLASKEADKFQAEKWAKYPPIIKDFYIEDEQIKNMPKQEVKE
FRIKTNNINVGLTFDLDDPSANIDDVIPNPVQTFEQAFRHYPEILDEIKKQGFEKPSPIQ
CQAWPILMKGLDMIGIAQTGTGKTLAFLLPALIHIDRQTIPRKERKGPTCLIIAPTHELA
LQIEKEVNKYNYRDIKAVCVYGGGDRKAQIRAVAQIREIVIATPGRLNDLVQEGTLDVKG
VSYLILDEADRMLDMGFEPQIRKTLLDVRPDRQSVMTSATWPAGVRRLASSYMKNPITVC
VGTMDLKAVHSVTQRIIIVEEEEKMDMLKDFFHNMGPDDKAIVFFGRKVTVDNIGSDLAL
SGVKCQSIHGGRDQFDREQALEDIKSGHVNILLATDVASRGIDIEDITHVLNFDFPRDIE
EYVHRVGRTGRAGRRGESISFMTRRDWAQAEKLIAILEEAQQDVPEELHSMAERYDAMKK
RKAAEGGNSRFGNNRFGGNDRSNNRNNYSNNRSGNNSRW
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgagttggactaatagcaacaggagaaacaattatagaaacgatagcagaggtaattat
aataataatgatagacgccaggatagacgtcaggataatttttcctcgcaagaaagtggc
catcagatgtacgtaccgtcacagcatctcggcaaactcatcggcagagctggtagccaa
attaaggaatttcaagaaaaaaccaatacgaaaatccttgttaagaaggaatgcactcaa
ggagattccacactgattgagataattggtgatacagaaaaccaaactgaggctgttaat
gcaattagtaacctcttaaatcttggaaataatgcgacgcaatcatacggtgatcacgga
tttaaagaaaacgcattggaagataccaaacccagtgccgtggatattgattgggattta
gcttcaaaagaagcggacaaatttcaagcagagaaatgggcaaaatacccaccaattata
aaagacttttatattgaagacgaacaaatcaagaatatgccaaaacaagaggtaaaagaa
ttcagaattaaaacaaataatataaacgttggtctaacatttgatttggatgatccatcc
gctaacattgatgacgtaatacccaatccagttcaaacatttgaacaagcattcagacat
tatcctgaaatccttgatgaaataaaaaagcagggcttcgaaaagccgagtccaattcaa
tgccaagcttggcctattttgatgaaaggattagatatgattggaattgctcaaacaggt
actggaaaaactttagcatttttacttccagcgctcatacacattgatcgtcaaaccatt
ccaaggaaagaacgtaaaggtcctacatgcctaatcattgcaccaacgcatgaacttgcc
ttacaaattgaaaaagaggtaaataagtataattaccgtgacattaaagctgtttgtgtt
tatggtggaggagatcgtaaagcacagataagagcagttgctcaaataagggaaattgta
attgctactccaggtagattaaatgatttggttcaggaaggtacgttggatgttaaaggt
gtatcatacttgattttggatgaagctgatcgtatgctggacatgggattcgaaccacag
attagaaaaactttacttgatgtacgtccagatagacaatcagttatgacaagtgcaact
tggcctgctggtgttagaagattagcttcgtcttacatgaaaaatcctattactgtatgt
gtaggtactatggatttgaaagctgttcattcagttactcaaagaatcattattgtagag
gaagaagaaaaaatggatatgctgaaagactttttccacaatatgggacctgatgataaa
gctattgttttctttggtagaaaagttactgttgacaatataggaagtgatttagcttta
agtggagtaaaatgtcaaagtattcatggaggacgagatcagtttgatagagaacaagca
cttgaggacatcaaatctggacatgtcaatattttattagcaactgatgtagcaagcaga
ggtatcgatattgaagacattactcatgtcttgaactttgactttccacgggacatcgaa
gaatatgttcacagagtaggcagaactggccgagctggtcgtagaggagaaagcatcagc
tttatgactcgcagagactgggctcaagcagaaaaactaattgctatattagaagaagct
caacaagatgttcctgaagaattacactcaatggcagaacgatatgatgccatgaaaaag
cgcaaagctgctgaaggtggtaattcacgttttggaaataatcgatttggaggaaatgat
cggtcaaataaccgaaataattattcaaataaccgttctggtaacaattcaaggtggtag
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