Trichogramma pretiosum: 106659354
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Entry
106659354 CDS
T07644
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106659354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106659354
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106659354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
AAA_22
Motif
Other DBs
NCBI-GeneID:
106659354
NCBI-ProteinID:
XP_014237361
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MSRHRDVRSMNYSDEYDGYDDVYGHSVEDDYCVSPSAEQFMFDRSKQPNISSFFTEPDIQ
EDNEEIEDIPSSYKLPQLSDLDAAKLMSCIEAIKNVIGDTHPESELNKKIIEFNFNTEAV
LNSILNEESSKKITNKPTTEKDIDNLRPDFTTSSKIVPKLASQVSQPTVKVIPAAAARSI
TKGFDVCGTNENIESLGTSRSQSPCSGRNSPDPLTRDDSSFSRREKKQTALSVLNKSTSS
RSQSPAVIDEGRIAEDKRDALAIYRSKRAGCKEQLHLICVGHVDAGKSTLLGRLLCDLGQ
VSSKLMHKYQQESKKIGKQSFAYAWVLDETGEERERGITMDVGQSKFETSTKAITLLDAP
GHKDFIPNMIIGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRSLGVSQLAVVVN
KLDTVNWSKERFNEIVNKISVFLKQAGFKETVTCVPCSGLSGENIVTKPKAEGLSNWYTG
PTLVEVIDNFKCPERPVDKPLRFSVNDIFKNIGSGFSISGHMETGMVSVGDKVLVLPRNE
PAVIKGIQADDANITHAFAGDQVCLSLSGIDQQNLAIGDIVCSLAYPVPTTTCFQAHIVV
FQIKMPVTNGMSVVLHQQSLVEPAVITKLVAQLNRSSGEVIKKKPRCLIKNTSAIVQITT
QRPICVELHKDVKQLGRVMLRVDGTTIAAGLVTKIV
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacatagagatgtacgttctatgaattattcagatgaatatgatggatacgat
gacgtttacgggcattccgtcgaagatgattactgtgtatcgccaagtgctgaacaattt
atgtttgatcgcagtaagcaacccaacatatcatcatttttcactgaaccggatatccaa
gaagataacgaagaaattgaagacataccttcaagttataaactaccacagttgtcagat
ttagatgcagctaaacttatgtcttgtattgaagccatcaaaaatgttataggagataca
catcctgaatctgaattaaacaaaaaaattatagaattcaatttcaatacagaagctgtt
ctcaattcgattcttaatgaggaatcttcaaaaaagataacaaataagccaacaactgag
aaagatattgataatttgcgcccagattttacaacttcaagtaaaatagtacctaaactg
gcttctcaagtgtctcagccaacagtaaaagtaatacctgcagcagctgccagaagtatt
acaaagggttttgatgtttgtggaaccaatgaaaatatagaatcacttggaacatcgcgc
tctcaaagtccatgttcaggtcgaaattcaccagatccattgacacgggatgatagtagt
tttagcaggagagaaaagaaacagacggctctatcagttttgaataaatctacttcatca
cgaagtcaatctccagctgtaattgatgaaggacgaattgctgaagataaaagagatgct
ttagcaatttatcgaagtaaacgagctggatgtaaagaacaactgcatcttatatgtgtt
ggccatgtggatgcaggaaaaagtaccttactaggtagattgctgtgtgatttaggtcaa
gtatcatctaaacttatgcataagtatcaacaagaaagtaaaaaaattggaaaacaatct
tttgcttatgcctgggtccttgatgaaacaggtgaagaaagagagcggggtatcacaatg
gatgtaggacaatccaaatttgaaacttcaacaaaggctatcaccctgttggatgctcct
ggtcataaagattttataccaaacatgataattggtgctacacaagcagatgttgctcta
cttgttgttgatgcaaccagaggagaattcgaaacaggttttgatagcggaggtcaaaca
agagaacatgcattactcttaaggtctcttggagtatctcaactagccgttgtagttaat
aaattagatacagttaattggtcaaaagaaagattcaatgaaatagtaaataaaatcagt
gtctttctgaagcaagcaggttttaaagaaacagtcacctgtgttccttgcagtggttta
tccggagaaaatattgtgactaaaccaaaagctgaaggattatctaattggtacactggt
ccaaccttagttgaagtaattgataacttcaagtgcccagaacgacctgttgataaacct
ttaaggttttctgttaatgatattttcaaaaatattggctctggttttagtatttctgga
catatggaaactggtatggtatctgttggtgacaaagttcttgtcttaccacgcaatgag
cctgctgttataaaaggcattcaagcggatgatgcaaacataactcatgcctttgctggt
gatcaagtttgtcttagtctatcaggaattgatcaacaaaatttggcaattggtgatata
gtttgcagtttagcttatccagtgccaaccacaacatgttttcaagctcatattgtagta
tttcaaatcaaaatgcctgtaactaatggcatgtctgtagtgctacatcaacagtctctt
gttgagcctgctgttataactaaacttgttgctcaattaaatcggagctcaggtgaagtt
attaaaaaaaagccaaggtgtttaattaaaaatacaagtgctattgttcaaataactact
caaagaccaatttgtgtagaactacataaagatgtaaaacagttaggtagagttatgttg
agagttgatggtacaaccattgctgctggacttgttacaaaaattgtatga
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