Trichogramma pretiosum: 106659518
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Entry
106659518 CDS
T07644
Name
(RefSeq) mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03430
Mismatch repair
tpre03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106659518
03460 Fanconi anemia pathway
106659518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpre03400
]
106659518
DNA repair and recombination proteins [BR:
tpre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
106659518
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
ExsD
Motif
Other DBs
NCBI-GeneID:
106659518
NCBI-ProteinID:
XP_014237579
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MDTSESVSNNVKQLNKNVVHKICSGQVILDLATAVKELVENSLDGKSTIIDVKLTDYGKS
CITVIDNGKGILEDDFSSIGLKYHTSKLQEFSHLSTIETFGFRGEALSSLCSISDLSIIT
KHTSAENAFNLKFDKKGVLVSQTKCARQTGTTVHVKNIFKDLPVRFKEFNDNIKKEFAKM
IRVLQGYCMVSTGVKITCTNTISNKCKTIVGTSATNNVLENISAIFGRKAKEDLIEVELQ
LPEADILHEYGLPENVVVNFSWECFVSSCNHSSGRAASDRQFLFVNNRPFDSIKIIKLIN
QIYHEYNQKQYPFVFLNVMLESSCVDINVTPDKRTVLFSQENIILATIKSSFTKIWDNVQ
RTFTKKSLLDIHPNIIKKESEQKISLESFKNKFKVKEKSYVDSQDDYMDHKICSQNLNNS
NIEEEEKSCEDSQKNRIDDQLHSQNENDANIHEEESDYNFENRLEKVMPISLNKIKSKMG
TLVDQKLSEKLTFKTELSSSDQETKLNEMLDKESFLKMQIIGQFNLGFILARLNEDIYII
DQHATDEKFRFEKLINNNKVETQRLITPNAVFLPISDECVLIDNKEMFEMNGFYFNINED
ENPGSRVSLVGIPCVNKRKLGFEDMEELIFLIRENGGDSIDKIIRPSKVRALFASKACRT
AVMIGKTLNQEEMRKLINQMSETKNPWSCPHGRPTTRLLFSLDSKTI
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggatacctctgaaagtgtttcaaataatgttaaacagctaaacaaaaatgttgttcat
aaaatttgttcaggccaagttatacttgatttagcaactgcggtcaaagaattagttgaa
aacagcttagatggtaaatccactattattgatgtcaaattaactgactatggaaaatct
tgtataactgttattgacaatgggaaaggtattttagaggatgattttagctccattggt
ttaaaatatcatacgtctaaacttcaagagttttcccatctatcaactattgaaacattt
ggatttagaggagaagctttgagttctttgtgttctatttcagatctttcaattataaca
aaacatactagtgctgagaatgcttttaatttaaagtttgataaaaaaggggtcttagtt
tctcagaccaaatgtgcacgacaaactggaacaacagtacacgtaaaaaatatatttaag
gacttgcctgttaggttcaaagaattcaatgataatataaaaaaagaatttgcaaaaatg
attagagttcttcaaggatattgtatggtatcaacaggtgttaaaataacttgtaccaat
accatatctaataaatgtaaaactattgtgggaactagtgctacgaataatgtacttgaa
aatatatcagcaatttttggaaggaaggctaaagaggatttaatagaggtagaattacaa
ttaccagaagcagatattttacatgaatacggtttaccagaaaacgtagtagtaaacttt
tcatgggaatgttttgttagtagttgcaatcatagttcaggacgtgctgcatcagataga
caatttctttttgtgaacaatcgaccattcgatagcataaaaattataaaacttattaat
caaatttatcacgaatataatcaaaaacaatatccatttgtatttttaaatgttatgttg
gaatctagctgtgtcgacataaatgttacgcctgataaaagaacagttttattttcccag
gaaaatattattcttgccacaatcaaaagtagtttcacaaaaatttgggataacgtgcag
agaacatttacaaaaaaatcattacttgatattcatcccaatataatcaaaaaagagtca
gaacaaaaaatatctttagaatcttttaaaaataaattcaaagtaaaagaaaaatcatat
gtggatagccaagatgattacatggatcacaaaatatgttctcaaaatttaaataatagt
aatattgaggaggaagaaaaatcatgtgaagatagtcaaaagaatcgaatagacgatcaa
ttgcattctcagaatgaaaatgatgctaatattcatgaggaagaaagtgactataatttt
gaaaaccgtttagaaaaagtgatgccaattagtttgaacaaaatcaaatctaagatggga
actttggtcgatcaaaaattaagtgaaaaattgactttcaaaaccgaattgagttcttcg
gatcaagagacaaagctcaatgaaatgctggacaaagaatcattcttaaaaatgcaaatc
attggacaattcaatttaggattcattttggcaagactcaatgaagacatctacatcatt
gatcagcacgctaccgatgaaaaatttcgatttgaaaaactgatcaacaataataaagtt
gaaactcaaagactgattactccaaacgccgtatttttgcccatcagcgatgaatgcgtt
ctcatagataataaagaaatgtttgaaatgaatggattctatttcaatattaacgaagat
gaaaatccaggttcgagagttagtttagttggcataccatgcgtcaacaaacgtaagcta
ggctttgaagatatggaagaactaatttttttaattcgagaaaatggaggtgattcaatt
gataaaatcattagaccatcgaaagtaagggcgctgtttgcatcgaaagcatgccgaaca
gctgtgatgataggaaagactctaaatcaagaagaaatgagaaaacttattaatcaaatg
agcgaaacgaaaaatccgtggtcatgcccgcacgggagacccaccactcgactcttattt
tctcttgactcaaaaactatatga
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